RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W DML1Q03652 475 aa1.88□□□□□ -2.11
HRD3YLR207W YOR020W-AQ3E824 90 aa1.88□□□□□ -2.11
HRD3YLR207W MHF1Q3E835 90 aa1.88□□□□□ -2.11
HRD3YLR207W MBF1O14467 151 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W PBI2P0CT04 75 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W MAG1P22134 296 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W YCR023CP25351 611 aa1.88□□□□□ -2.11
HRD3YLR207W YBR063CP38083 404 aa1.88□□□□□ -2.11
HRD3YLR207W YBL081WP38180 368 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W TEM1P38987 245 aa1.88□□□□□ -2.11
HRD3YLR207W SNM1P40993 198 aa1.88□□□□□ -2.11
HRD3YLR207W UBC12P52491 188 aa1.88□□□□□ -2.11
HRD3YLR207W NMA1Q06178 401 aaKnown RBP1.88□□□□□ -2.11
HRD3YLR207W YDL211CQ12121 372 aa1.88□□□□□ -2.11
HRD3YLR207W YPR014CQ6B0W2 109 aa1.88□□□□□ -2.11
HRD3YLR207W YHR139C-AO13536 103 aa1.87□□□□□ -2.11
HRD3YLR207W CDC7P06243 507 aa1.87□□□□□ -2.11
HRD3YLR207W SGA1P08019 549 aa1.87□□□□□ -2.11
HRD3YLR207W YPR170W-BP0C5R9 85 aa1.87□□□□□ -2.11
HRD3YLR207W SEN2P16658 377 aa1.87□□□□□ -2.11
HRD3YLR207W YOR062CP36025 268 aa1.87□□□□□ -2.11
HRD3YLR207W CIN5P40917 295 aa1.87□□□□□ -2.11
HRD3YLR207W PKR1Q03880 122 aaKnown RBP1.87□□□□□ -2.11
HRD3YLR207W ELP6Q04868 273 aa1.87□□□□□ -2.11
HRD3YLR207W ATG5Q12380 294 aa1.87□□□□□ -2.11
HRD3YLR207W RIB3Q99258 208 aa1.87□□□□□ -2.11
HRD3YLR207W DSF1P0CX08 502 aa1.87□□□□□ -2.11
HRD3YLR207W YNR073CP0CX09 502 aa1.87□□□□□ -2.11
HRD3YLR207W YHR214C-DP0CX93 97 aa1.87□□□□□ -2.11
HRD3YLR207W LDB16P25587 256 aa1.87□□□□□ -2.11
HRD3YLR207W RNP1P32385 249 aa1.87□□□□□ -2.11
HRD3YLR207W MSA2P36157 363 aa1.87□□□□□ -2.11
HRD3YLR207W YAR068WP39564 161 aa1.87□□□□□ -2.11
HRD3YLR207W BDH1P39714 382 aa1.87□□□□□ -2.11
HRD3YLR207W PGU1P47180 361 aa1.87□□□□□ -2.11
HRD3YLR207W YGR050CP53231 118 aa1.87□□□□□ -2.11
HRD3YLR207W RSM27P53305 110 aa1.87□□□□□ -2.11
HRD3YLR207W RAV2Q03956 351 aa1.87□□□□□ -2.11
HRD3YLR207W GRH1Q04410 372 aaKnown RBP1.87□□□□□ -2.11
HRD3YLR207W YMR252CQ04814 134 aa1.87□□□□□ -2.11
HRD3YLR207W DGA1Q08650 418 aa1.87□□□□□ -2.11
HRD3YLR207W TIM22Q12328 207 aa1.87□□□□□ -2.11
HRD3YLR207W DFM1Q12743 341 aaKnown RBP1.87□□□□□ -2.11
HRD3YLR207W ADH3P07246 375 aaKnown RBP1.86□□□□□ -2.11
HRD3YLR207W TCA17P32613 152 aa1.86□□□□□ -2.11
HRD3YLR207W YGP1P38616 354 aaKnown RBP1.86□□□□□ -2.11
HRD3YLR207W LPP1Q04396 274 aa1.86□□□□□ -2.11
HRD3YLR207W UIP4Q08926 304 aa1.86□□□□□ -2.11
HRD3YLR207W YPL162CQ12042 273 aa1.86□□□□□ -2.11
HRD3YLR207W PST2Q12335 198 aaKnown RBP1.86□□□□□ -2.11
HRD3YLR207W BBP1Q12365 385 aa1.86□□□□□ -2.11
HRD3YLR207W YOR343CQ12484 108 aa1.86□□□□□ -2.11
HRD3YLR207W ISD11Q6Q560 94 aa1.86□□□□□ -2.11
HRD3YLR207W YAL067W-AQ8TGK6 75 aa1.86□□□□□ -2.11
HRD3YLR207W YKL102CP34249 101 aa1.86□□□□□ -2.11
HRD3YLR207W SWD3P38123 315 aa1.86□□□□□ -2.11
HRD3YLR207W IPT1P38954 527 aa1.86□□□□□ -2.11
HRD3YLR207W ARO8P53090 500 aaKnown RBP1.86□□□□□ -2.11
HRD3YLR207W HSK3P69852 69 aa1.86□□□□□ -2.11
HRD3YLR207W YDR249CQ03787 373 aa1.86□□□□□ -2.11
HRD3YLR207W GPI17Q04080 534 aa1.86□□□□□ -2.11
HRD3YLR207W IRC19Q07843 230 aa1.86□□□□□ -2.11
HRD3YLR207W NIP7Q08962 181 aaKnown RBP1.86□□□□□ -2.11
HRD3YLR207W Q0144Q9ZZW2 109 aa1.86□□□□□ -2.11
HRD3YLR207W ADK1P07170 222 aaKnown RBP1.85□□□□□ -2.11
HRD3YLR207W NHP6AP11632 93 aaKnown RBP1.85□□□□□ -2.11
HRD3YLR207W SLM6P38343 150 aa1.85□□□□□ -2.11
HRD3YLR207W DID2P69771 204 aa1.85□□□□□ -2.11
HRD3YLR207W ECM19Q06011 112 aa1.85□□□□□ -2.11
HRD3YLR207W MCP1Q12106 302 aa1.85□□□□□ -2.11
HRD3YLR207W SMT3Q12306 101 aaKnown RBP1.85□□□□□ -2.11
HRD3YLR207W COX5BP00425 151 aa1.85□□□□□ -2.11
HRD3YLR207W CKS1P20486 150 aaKnown RBP1.85□□□□□ -2.11
HRD3YLR207W CNB1P25296 175 aa1.85□□□□□ -2.11
HRD3YLR207W RCN1P36054 211 aa1.85□□□□□ -2.11
HRD3YLR207W RPF1P38805 295 aaKnown RBP1.85□□□□□ -2.11
HRD3YLR207W MNN5P46982 586 aa1.85□□□□□ -2.11
HRD3YLR207W UFD1P53044 361 aa1.85□□□□□ -2.11
HRD3YLR207W YGL101WP53144 215 aa1.85□□□□□ -2.11
HRD3YLR207W ACT1P60010 375 aaKnown RBP1.85□□□□□ -2.11
HRD3YLR207W BUD25P85052 153 aa1.85□□□□□ -2.11
HRD3YLR207W RFU1Q08003 200 aa1.85□□□□□ -2.11
HRD3YLR207W YOR214CQ12282 236 aa1.85□□□□□ -2.11
HRD3YLR207W MPD1Q12404 318 aaKnown RBP1.85□□□□□ -2.11
HRD3YLR207W YLR099W-AQ3E798 87 aa1.85□□□□□ -2.11
HRD3YLR207W YBL112CQ3E7Y4 105 aa1.85□□□□□ -2.11
HRD3YLR207W YFR032C-BQ8TGU2 87 aa1.85□□□□□ -2.11
HRD3YLR207W FLO9P39712 1322 aa1.85□□□□□ -2.11
HRD3YLR207W YEL045CP32616 141 aa1.84□□□□□ -2.11
HRD3YLR207W ARP3P47117 449 aaKnown RBP1.84□□□□□ -2.11
HRD3YLR207W HHT1P61830 136 aa1.84□□□□□ -2.11
HRD3YLR207W ATG39Q06159 398 aa1.84□□□□□ -2.11
HRD3YLR207W RAF1Q06891 181 aa1.84□□□□□ -2.11
HRD3YLR207W MED11Q99278 115 aa1.84□□□□□ -2.11
HRD3YLR207W PAU24P38155 120 aa1.84□□□□□ -2.12
HRD3YLR207W COS8P38723 381 aa1.84□□□□□ -2.12
HRD3YLR207W IPI1P38803 334 aaPredicted RBP1.84□□□□□ -2.12
HRD3YLR207W IRC22P40006 225 aa1.84□□□□□ -2.12
HRD3YLR207W YJR015WP47090 510 aa1.84□□□□□ -2.12
HRD3YLR207W YJR111CP47148 283 aaKnown RBP1.84□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms