RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	YOL159C	Q08300	171 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	YOL160W	Q08321	113 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	YPL229W	Q99395	206 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	KOG1	P38873	1557 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	RRP5	Q05022	1729 aa	Known RBP	4.14	□□□□□ -1.75
SEC9	YGR009C	YRF1-3	P0CX14	1859 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	YRF1-7	P0CX15	1859 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	YRF1-6	P53819	1859 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	GPX2	P38143	162 aa		4.14	□□□□□ -1.75
SEC9	YGR009C	ALG9	P53868	555 aa	Known RBP	4.14	□□□□□ -1.75
SEC9	YGR009C	ATG2	P53855	1592 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	HEM4	P06174	275 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	CDC43	P18898	376 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	PAM17	P36147	197 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	ATX1	P38636	73 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	SPO73	P40031	143 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	MPM1	P40364	252 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	YMR252C	Q04814	134 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	TSC3	Q3E790	80 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	MHF1	Q3E835	90 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	SUS1	Q6WNK7	96 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	YLR422W	Q06409	1932 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	YMC2	P38087	329 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	MIX23	P38162	196 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	YHR138C	P38841	114 aa	Predicted RBP	4.13	□□□□□ -1.75
SEC9	YGR009C	SCW11	P53189	542 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	NMA2	P53204	395 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	CAX4	P53223	239 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	VHT1	P53241	593 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	FHN1	P53279	174 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	ERV29	P53337	310 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	KSH1	Q8TGJ3	72 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	TAD3	Q9URQ3	322 aa		4.13	□□□□□ -1.75
SEC9	YGR009C	YKL097C	P34245	136 aa		4.12	□□□□□ -1.75
SEC9	YGR009C	PEX17	P40155	199 aa		4.12	□□□□□ -1.75
SEC9	YGR009C	YNL320W	P42840	284 aa		4.12	□□□□□ -1.75
SEC9	YGR009C	EMC4	P53073	190 aa		4.12	□□□□□ -1.75
SEC9	YGR009C	MRPS16	Q02608	121 aa		4.12	□□□□□ -1.75
SEC9	YGR009C	NMA1	Q06178	401 aa	Known RBP	4.12	□□□□□ -1.75
SEC9	YGR009C	TIM18	Q08749	192 aa		4.12	□□□□□ -1.75
SEC9	YGR009C	SPO14	P36126	1683 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	MRS4	P23500	304 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	CNE1	P27825	502 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	MTR2	P34232	184 aa	Known RBP	4.11	□□□□□ -1.75
SEC9	YGR009C	SHE1	P38200	338 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	PHO89	P38361	574 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	KNH1	P50112	268 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	GAT3	Q07928	141 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	VTH1	P40438	1549 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	VTH2	P40890	1549 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	TY3B-G	Q99315	1547 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	YAL064W-B	O13512	126 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	Q0255	P03881	472 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	YCR085W	P25650	117 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	CDC5	P32562	705 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	CSE2	P33308	149 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	SFT2	P38166	215 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	YBR032W	P38223	100 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	PHS1	P40857	217 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	TDA4	P47153	279 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	YGL088W	P53151	121 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	YGL034C	P53186	121 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	GPI19	Q04082	140 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	YDL057W	Q07379	328 aa		4.11	□□□□□ -1.75
SEC9	YGR009C	POR1	P04840	283 aa	Known RBP	4.1	□□□□□ -1.75
SEC9	YGR009C	RPS13	P05756	151 aa	Known RBP	4.1	□□□□□ -1.75
SEC9	YGR009C	CKS1	P20486	150 aa	Known RBP	4.1	□□□□□ -1.75
SEC9	YGR009C	URA10	P30402	227 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	YNL198C	P40166	100 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	GAT4	P40569	121 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	RIM8	P53179	542 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	YNL234W	P53857	426 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	JID1	Q12350	301 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	YER175W-A	Q8TGU4	54 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	YRF1-2	P40105	1681 aa		4.1	□□□□□ -1.75
SEC9	YGR009C	YAR066W	P0CX18	203 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	YHR214W	P0CX19	203 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	FUN19	P28003	413 aa	Predicted RBP	4.09	□□□□□ -1.75
SEC9	YGR009C	MRP17	P28778	131 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	PEX2	P32800	271 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	IRC22	P40006	225 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	EMC5	P40540	141 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	JJJ3	P47138	172 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	TDA7	P53882	636 aa	Predicted RBP	4.09	□□□□□ -1.75
SEC9	YGR009C	YNL046W	P53956	172 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	ROT1	Q03691	256 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	YLR281C	Q05863	155 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	HTL1	Q9URQ5	78 aa		4.09	□□□□□ -1.75
SEC9	YGR009C	CDC25	P04821	1589 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	YCR050C	P25630	102 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	AHT1	P29589	182 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	CTF8	P38877	133 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	YJL218W	P40892	196 aa	Known RBP	4.09	□□□□□ -1.76
SEC9	YGR009C	YGR045C	P53229	120 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	YGR050C	P53231	118 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	SUT2	Q12286	268 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	SWM1	Q12379	170 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	YHR214C-E	Q8TGK0	99 aa		4.09	□□□□□ -1.76
SEC9	YGR009C	ARO1	P08566	1588 aa	Known RBP	4.08	□□□□□ -1.76
SEC9	YGR009C	SMP1	P38128	452 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms