RNA–Protein interactions for RNA: YGL129C

RSM23, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM23, Length 1,353 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM23	YGL129C	MOB1	P40484	314 aa		1.08	□□□□□ -2.24
RSM23	YGL129C	KEI1	Q06346	221 aa		1.08	□□□□□ -2.24
RSM23	YGL129C	RAD6	P06104	172 aa		1.08	□□□□□ -2.24
RSM23	YGL129C	YOL013W-A	P0C272	63 aa	Predicted RBP	1.08	□□□□□ -2.24
RSM23	YGL129C	YEL028W	P39989	153 aa		1.08	□□□□□ -2.24
RSM23	YGL129C	YDC1	Q02896	317 aa		1.08	□□□□□ -2.24
RSM23	YGL129C	TRR1	P29509	319 aa	Known RBP	1.07	□□□□□ -2.24
RSM23	YGL129C	YGR269W	P40326	108 aa		1.07	□□□□□ -2.24
RSM23	YGL129C	NQM1	P53228	333 aa	Predicted RBP	1.07	□□□□□ -2.24
RSM23	YGL129C	YIP3	P53633	176 aa		1.07	□□□□□ -2.24
RSM23	YGL129C	PEX11	Q12462	236 aa		1.07	□□□□□ -2.24
RSM23	YGL129C	TMA23	Q03525	211 aa		1.06	□□□□□ -2.24
RSM23	YGL129C	SYM1	Q06563	197 aa		1.06	□□□□□ -2.24
RSM23	YGL129C	TIM13	P53299	105 aa		1.05	□□□□□ -2.24
RSM23	YGL129C	YDL241W	Q07738	123 aa		1.05	□□□□□ -2.24
RSM23	YGL129C	YDL157C	Q12082	118 aa		1.05	□□□□□ -2.24
RSM23	YGL129C	FCY1	Q12178	158 aa		1.05	□□□□□ -2.24
RSM23	YGL129C	YML079W	Q03629	201 aa		1.04	□□□□□ -2.24
RSM23	YGL129C	KIN28	P06242	306 aa		1.03	□□□□□ -2.24
RSM23	YGL129C	GLR1	P41921	483 aa	Known RBP	1.03	□□□□□ -2.24
RSM23	YGL129C	TRM3	Q07527	1436 aa		1.03	□□□□□ -2.24
RSM23	YGL129C	YCR001W	P25347	104 aa		1.02	□□□□□ -2.25
RSM23	YGL129C	XPT1	P47165	209 aa		1.02	□□□□□ -2.25
RSM23	YGL129C	HSK3	P69852	69 aa		1.02	□□□□□ -2.25
RSM23	YGL129C	THI74	Q04083	370 aa		1.02	□□□□□ -2.25
RSM23	YGL129C	RAD51	P25454	400 aa		1.01	□□□□□ -2.25
RSM23	YGL129C	NUF2	P33895	451 aa		1.01	□□□□□ -2.25
RSM23	YGL129C	SPS2	P08459	502 aa		1	□□□□□ -2.25
RSM23	YGL129C	INO4	P13902	151 aa		1	□□□□□ -2.25
RSM23	YGL129C	SEC72	P39742	193 aa	Known RBP	1	□□□□□ -2.25
RSM23	YGL129C	RPS25B	P0C0T4	108 aa	Known RBP	0.99	□□□□□ -2.25
RSM23	YGL129C	PRE1	P22141	198 aa	Known RBP	0.99	□□□□□ -2.25
RSM23	YGL129C	GIM3	P53900	129 aa		0.99	□□□□□ -2.25
RSM23	YGL129C	LIP1	Q03579	150 aa		0.99	□□□□□ -2.25
RSM23	YGL129C	RPS25A	Q3E792	108 aa	Predicted RBP	0.99	□□□□□ -2.25
RSM23	YGL129C	CMC4	Q3E7A9	73 aa		0.99	□□□□□ -2.25
RSM23	YGL129C	RIF1	P29539	1916 aa		0.99	□□□□□ -2.25
RSM23	YGL129C	TAF2	P23255	1407 aa		0.99	□□□□□ -2.25
RSM23	YGL129C	HRD1	Q08109	551 aa		0.98	□□□□□ -2.25
RSM23	YGL129C	YLR050C	Q12155	161 aa	Known RBP	0.97	□□□□□ -2.25
RSM23	YGL129C	HHY1	P39982	102 aa		0.96	□□□□□ -2.26
RSM23	YGL129C	GLC8	P41818	229 aa		0.96	□□□□□ -2.26
RSM23	YGL129C	YPR114W	Q06107	315 aa		0.96	□□□□□ -2.26
RSM23	YGL129C	SPT14	P32363	452 aa		0.96	□□□□□ -2.26
RSM23	YGL129C	PTC1	P35182	281 aa		0.95	□□□□□ -2.26
RSM23	YGL129C	SRP14	P38985	146 aa		0.95	□□□□□ -2.26
RSM23	YGL129C	ATG10	Q07879	167 aa		0.95	□□□□□ -2.26
RSM23	YGL129C	RPL35A	P0CX84	120 aa	Known RBP	0.94	□□□□□ -2.26
RSM23	YGL129C	RPL35B	P0CX85	120 aa	Known RBP	0.94	□□□□□ -2.26
RSM23	YGL129C	HFA1	P32874	2273 aa		0.93	□□□□□ -2.26
RSM23	YGL129C	YNL140C	P53910	189 aa		0.93	□□□□□ -2.26
RSM23	YGL129C	YBR027C	P38220	110 aa		0.92	□□□□□ -2.26
RSM23	YGL129C	YPT31	P38555	223 aa	Known RBP	0.92	□□□□□ -2.26
RSM23	YGL129C	EGD2	P38879	174 aa	Known RBP	0.92	□□□□□ -2.26
RSM23	YGL129C	APS3	P47064	194 aa		0.92	□□□□□ -2.26
RSM23	YGL129C	GEP7	P53171	287 aa		0.92	□□□□□ -2.26
RSM23	YGL129C	UIP4	Q08926	304 aa		0.92	□□□□□ -2.26
RSM23	YGL129C	PRP8	P33334	2413 aa	Known RBP	0.92	□□□□□ -2.26
RSM23	YGL129C	YDR102C	Q03864	110 aa		0.91	□□□□□ -2.26
RSM23	YGL129C	CIN5	P40917	295 aa		0.9	□□□□□ -2.27
RSM23	YGL129C	HSP150	P32478	413 aa		0.89	□□□□□ -2.27
RSM23	YGL129C	YEL014C	P39999	101 aa		0.89	□□□□□ -2.27
RSM23	YGL129C	YNR064C	P53750	290 aa		0.89	□□□□□ -2.27
RSM23	YGL129C	PLP1	Q04004	230 aa		0.89	□□□□□ -2.27
RSM23	YGL129C	CCC1	P47818	322 aa		0.88	□□□□□ -2.27
RSM23	YGL129C	CMD1	P06787	147 aa	Known RBP	0.87	□□□□□ -2.27
RSM23	YGL129C	YHR213W-B	Q8TGK1	99 aa		0.87	□□□□□ -2.27
RSM23	YGL129C	ORM1	P53224	222 aa		0.86	□□□□□ -2.27
RSM23	YGL129C	ROM2	P51862	1356 aa	Known RBP	0.86	□□□□□ -2.27
RSM23	YGL129C	ATG8	P38182	117 aa	RIP-Chip data	0.85	□□□□□ -2.27	not detected
RSM23	YGL129C	ATG38	Q05789	226 aa	Known RBP	0.85	□□□□□ -2.27
RSM23	YGL129C	VAM10	Q08474	114 aa		0.85	□□□□□ -2.27
RSM23	YGL129C	MRS4	P23500	304 aa		0.84	□□□□□ -2.27
RSM23	YGL129C	ADE6	P38972	1358 aa	Known RBP	0.83	□□□□□ -2.28
RSM23	YGL129C	ATP5	P09457	212 aa		0.83	□□□□□ -2.28
RSM23	YGL129C	YGL101W	P53144	215 aa		0.83	□□□□□ -2.28
RSM23	YGL129C	YNL122C	P53921	115 aa	Predicted RBP	0.83	□□□□□ -2.28
RSM23	YGL129C	SED1	Q01589	338 aa		0.83	□□□□□ -2.28
RSM23	YGL129C	SRP102	P36057	244 aa	Predicted RBP	0.82	□□□□□ -2.28
RSM23	YGL129C	YER121W	P40076	114 aa		0.82	□□□□□ -2.28
RSM23	YGL129C	IPT1	P38954	527 aa		0.81	□□□□□ -2.28
RSM23	YGL129C	YLR046C	Q12253	270 aa		0.81	□□□□□ -2.28
RSM23	YGL129C	HTD2	P38790	280 aa	Known RBP	0.8	□□□□□ -2.28
RSM23	YGL129C	UBI4	P0CG63	381 aa	Known RBP	0.79	□□□□□ -2.28
RSM23	YGL129C	RIB3	Q99258	208 aa		0.79	□□□□□ -2.28
RSM23	YGL129C	SPA2	P23201	1466 aa	Known RBP	0.79	□□□□□ -2.28
RSM23	YGL129C	TMA20	P89886	181 aa	Predicted RBP	0.78	□□□□□ -2.28
RSM23	YGL129C	MGR2	Q02889	113 aa		0.78	□□□□□ -2.28
RSM23	YGL129C	SEN15	Q04675	128 aa		0.78	□□□□□ -2.28
RSM23	YGL129C	NMA1	Q06178	401 aa	Known RBP	0.78	□□□□□ -2.28
RSM23	YGL129C	LSM3	P57743	89 aa	Known RBP	0.76	□□□□□ -2.29
RSM23	YGL129C	FMN1	Q03778	218 aa		0.76	□□□□□ -2.29
RSM23	YGL129C	GIM5	Q04493	163 aa		0.76	□□□□□ -2.29
RSM23	YGL129C	CHD1	P32657	1468 aa		0.75	□□□□□ -2.29
RSM23	YGL129C	HSL1	P34244	1518 aa		0.75	□□□□□ -2.29
RSM23	YGL129C	ECM31	P38122	312 aa		0.75	□□□□□ -2.29
RSM23	YGL129C	RDI1	Q12434	202 aa		0.75	□□□□□ -2.29
RSM23	YGL129C	UBC6	P33296	250 aa	Predicted RBP	0.74	□□□□□ -2.29
RSM23	YGL129C	IRC19	Q07843	230 aa		0.74	□□□□□ -2.29
RSM23	YGL129C	HAP2	P06774	265 aa		0.73	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms