RNA–Protein interactions for RNA: YFL045C

SEC53, Transcript of Phosphomannomutase, yeast

Gene SEC53, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC53	YFL045C	TVP18	Q04767	167 aa		3.12	□□□□□ -1.91
SEC53	YFL045C	CNL1	Q06333	122 aa		3.12	□□□□□ -1.91
SEC53	YFL045C	PAU23	Q07987	124 aa		3.12	□□□□□ -1.91
SEC53	YFL045C	LDS2	Q08218	356 aa		3.12	□□□□□ -1.91
SEC53	YFL045C	PAU17	Q12370	124 aa		3.12	□□□□□ -1.91
SEC53	YFL045C	MPD1	Q12404	318 aa	Known RBP	3.12	□□□□□ -1.91
SEC53	YFL045C	RPS22B	Q3E7Y3	130 aa	Known RBP	3.12	□□□□□ -1.91
SEC53	YFL045C	TAO3	P40468	2376 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	RPL9A	P05738	191 aa	Known RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	HMRA1	P0CY11	126 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	YMR31	P19955	123 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	DER1	P38307	211 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	DOG1	P38774	246 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	CDC40	P40968	455 aa	Predicted RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	OST1	P41543	476 aa	Known RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	RPA43	P46669	326 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	XPT1	P47165	209 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	MIC27	P50945	234 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	RPL9B	P51401	191 aa	Known RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	MOT3	P54785	490 aa	Known RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	RPL21A	Q02753	160 aa	Known RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	YMR007W	Q03675	126 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	YMR166C	Q03829	368 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	NAT3	Q06504	195 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	LOA1	Q06508	300 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	YOL024W	Q08172	172 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	YOL118C	Q08259	102 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	YOR376W	Q08900	122 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	AKR2	Q12013	749 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	SWT1	Q12104	458 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	TPT1	Q12272	230 aa	Known RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	RPL21B	Q12672	160 aa	Known RBP	3.11	□□□□□ -1.91
SEC53	YFL045C	YOR192C-C	Q3E736	78 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	YGL258W-A	Q3E740	77 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	YIL046W-A	Q3E7Z4	54 aa		3.11	□□□□□ -1.91
SEC53	YFL045C	ROX3	P25046	220 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	PMU1	P36069	295 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	SRP14	P38985	146 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	SAS2	P40963	338 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	EGT2	P42835	1041 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	CPD1	P53314	239 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	YPL067C	Q02754	198 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	ATG21	Q02887	496 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	IZH1	Q03419	316 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	NUP53	Q03790	475 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	LIP2	Q06005	328 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	SRL1	Q08673	210 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	NAT5	Q08689	176 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	FIT3	Q08907	204 aa		3.1	□□□□□ -1.91
SEC53	YFL045C	SOD1	P00445	154 aa	Known RBP	3.09	□□□□□ -1.91
SEC53	YFL045C	TOM40	P23644	387 aa	Known RBP	3.09	□□□□□ -1.91
SEC53	YFL045C	QRI5	P32344	111 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	RAD23	P32628	398 aa	Known RBP	3.09	□□□□□ -1.91
SEC53	YFL045C	MRPL39	P36533	70 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	PRE5	P40302	234 aa	Known RBP	3.09	□□□□□ -1.91
SEC53	YFL045C	SEC24	P40482	926 aa	Known RBP	3.09	□□□□□ -1.91
SEC53	YFL045C	DFG10	P40526	253 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	YJR015W	P47090	510 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	DSK2	P48510	373 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	UBC13	P52490	153 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	WSC2	P53832	503 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	HSK3	P69852	69 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	MIX14	Q04341	121 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	SHH3	Q04487	196 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	NDE2	Q07500	545 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	RRS1	Q08746	203 aa	Known RBP	3.09	□□□□□ -1.91
SEC53	YFL045C	DAP1	Q12091	152 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	NCE102	Q12207	173 aa	RIP-Chip data	3.09	□□□□□ -1.91	not detected
SEC53	YFL045C	YIL002W-A	Q3E7Z5	69 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	YCR024C-B	Q3E7Z8	88 aa		3.09	□□□□□ -1.91
SEC53	YFL045C	VPS13	Q07878	3144 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YFL068W	P0CX99	160 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YLL066W-A	P0CY00	160 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YLL067W-A	P0CY01	160 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	UTR5	P32630	166 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YOX1	P34161	385 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	FYV4	P38783	130 aa	Predicted RBP	3.08	□□□□□ -1.92
SEC53	YFL045C	TEM1	P38987	245 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	UME6	P39001	836 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YAR068W	P39564	161 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YER134C	P40081	178 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YPS6	P40583	537 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	ECO1	P43605	281 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YGL118C	P53132	145 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	THG1	P53215	237 aa	Known RBP	3.08	□□□□□ -1.92
SEC53	YFL045C	SSU72	P53538	206 aa	Predicted RBP	3.08	□□□□□ -1.92
SEC53	YFL045C	ATP19	P81451	68 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	LPP1	Q04396	274 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YPL162C	Q12042	273 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	YDL157C	Q12082	118 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	POC4	Q12245	148 aa	Predicted RBP	3.08	□□□□□ -1.92
SEC53	YFL045C	YDL180W	Q12301	547 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	GEP5	Q12393	293 aa		3.08	□□□□□ -1.92
SEC53	YFL045C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
SEC53	YFL045C	TIR1	P10863	254 aa		3.07	□□□□□ -1.92
SEC53	YFL045C	PRE1	P22141	198 aa	Known RBP	3.07	□□□□□ -1.92
SEC53	YFL045C	HSP12	P22943	109 aa	Known RBP	3.07	□□□□□ -1.92
SEC53	YFL045C	GSP1	P32835	219 aa	Known RBP	3.07	□□□□□ -1.92
SEC53	YFL045C	GSP2	P32836	220 aa	Known RBP	3.07	□□□□□ -1.92
SEC53	YFL045C	MTR2	P34232	184 aa	Known RBP	3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms