RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeast

Gene CDC28, Length 897 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC28	YBR160W	ICS2	P38284	255 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	FYV4	P38783	130 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC28	YBR160W	PRE5	P40302	234 aa	Known RBP	4.11	□□□□□ -1.75
CDC28	YBR160W	YJL028W	P47062	111 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	YIP5	P53108	310 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	YNR061C	P53747	219 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	YNR064C	P53750	290 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	RPL21A	Q02753	160 aa	Known RBP	4.11	□□□□□ -1.75
CDC28	YBR160W	PKR1	Q03880	122 aa	Known RBP	4.11	□□□□□ -1.75
CDC28	YBR160W	RUB1	Q03919	77 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	LDS2	Q08218	356 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	YPL162C	Q12042	273 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	PRP46	Q12417	451 aa	Predicted RBP	4.11	□□□□□ -1.75
CDC28	YBR160W	RPL21B	Q12672	160 aa	Known RBP	4.11	□□□□□ -1.75
CDC28	YBR160W	YCR024C-B	Q3E7Z8	88 aa		4.11	□□□□□ -1.75
CDC28	YBR160W	ADH2	P00331	348 aa	Known RBP	4.1	□□□□□ -1.75
CDC28	YBR160W	SOD1	P00445	154 aa	Known RBP	4.1	□□□□□ -1.75
CDC28	YBR160W	MSI1	P13712	422 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	HMX1	P32339	317 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	SRX1	P36077	127 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	DER1	P38307	211 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	SHO1	P40073	367 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	DFG10	P40526	253 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	YIL029C	P40538	142 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	CIS3	P47001	227 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	ARP3	P47117	449 aa	Known RBP	4.1	□□□□□ -1.75
CDC28	YBR160W	GLO1	P50107	326 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	YGL230C	P53074	147 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	THG1	P53215	237 aa	Known RBP	4.1	□□□□□ -1.75
CDC28	YBR160W	CPD1	P53314	239 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	UPS1	Q05776	175 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	CSI2	Q08054	341 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	YOL118C	Q08259	102 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	FIT3	Q08907	204 aa		4.1	□□□□□ -1.75
CDC28	YBR160W	RPL7A	P05737	244 aa	Known RBP	4.09	□□□□□ -1.75
CDC28	YBR160W	QRI5	P32344	111 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	MRP49	P32388	137 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	GSP1	P32835	219 aa	Known RBP	4.09	□□□□□ -1.75
CDC28	YBR160W	GSP2	P32836	220 aa	Known RBP	4.09	□□□□□ -1.75
CDC28	YBR160W	SOF1	P33750	489 aa	Known RBP	4.09	□□□□□ -1.75
CDC28	YBR160W	YKL097C	P34245	136 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	TEM1	P38987	245 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	SEC24	P40482	926 aa	Known RBP	4.09	□□□□□ -1.75
CDC28	YBR160W	PGU1	P47180	361 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	YGL118C	P53132	145 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	YDR391C	Q04170	232 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	RIM9	Q04734	239 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	RPL7B	Q12213	244 aa	Known RBP	4.09	□□□□□ -1.75
CDC28	YBR160W	MPD1	Q12404	318 aa	Known RBP	4.09	□□□□□ -1.75
CDC28	YBR160W	YOR192C-C	Q3E736	78 aa		4.09	□□□□□ -1.75
CDC28	YBR160W	VPS63	O13549	108 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	COX2	P00410	251 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	DDI2	P0CH63	225 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	DDI3	P0CH64	225 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	SEC11	P15367	167 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	MDM10	P18409	493 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	YMR31	P19955	123 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	PCL7	P40186	285 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	SAS2	P40963	338 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	HAC1	P41546	238 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	MIC26	P50087	233 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	MIC27	P50945	234 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	YNL092W	P53934	400 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	ATP19	P81451	68 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	MSC3	Q05812	728 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	YFH1	Q07540	174 aa		4.08	□□□□□ -1.76
CDC28	YBR160W	MBF1	O14467	151 aa	Known RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	RPS16A	P0CX51	143 aa	Known RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	RPS16B	P0CX52	143 aa	Known RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	YHR214C-D	P0CX93	97 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	TIR1	P10863	254 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	CPR1	P14832	162 aa	Known RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	ROX3	P25046	220 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	IMP1	P28627	190 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	MCH2	P36032	473 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	HOT13	P36078	116 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	PAM17	P36147	197 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	RPF1	P38805	295 aa	Known RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	YHR138C	P38841	114 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	YER079W	P40052	210 aa	Known RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	YIL163C	P40448	117 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	DSK2	P48510	373 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	YGR017W	P53210	297 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	UPS3	Q04006	179 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	LPP1	Q04396	274 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	YPR098C	Q06089	161 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	POC4	Q12245	148 aa	Predicted RBP	4.07	□□□□□ -1.76
CDC28	YBR160W	YGL258W-A	Q3E740	77 aa		4.07	□□□□□ -1.76
CDC28	YBR160W	FAB1	P34756	2278 aa		4.06	□□□□□ -1.76
CDC28	YBR160W	CUP2	P15315	225 aa		4.06	□□□□□ -1.76
CDC28	YBR160W	TOM40	P23644	387 aa	Known RBP	4.06	□□□□□ -1.76
CDC28	YBR160W	YCR006C	P25350	157 aa		4.06	□□□□□ -1.76
CDC28	YBR160W	FPR2	P32472	135 aa		4.06	□□□□□ -1.76
CDC28	YBR160W	RAD23	P32628	398 aa	Known RBP	4.06	□□□□□ -1.76
CDC28	YBR160W	YAR068W	P39564	161 aa		4.06	□□□□□ -1.76
CDC28	YBR160W	MSL1	P40567	111 aa	Predicted RBP	4.06	□□□□□ -1.76
CDC28	YBR160W	REE1	P40893	198 aa		4.06	□□□□□ -1.76
CDC28	YBR160W	OST1	P41543	476 aa	Known RBP	4.06	□□□□□ -1.76
CDC28	YBR160W	YFL015C	P43578	164 aa		4.06	□□□□□ -1.76
CDC28	YBR160W	YJR015W	P47090	510 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms