RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 TAF14P35189 244 aa-1.32□□□□□ -2.62
snR55snR55 COX15P40086 486 aa-1.32□□□□□ -2.62
snR55snR55 HHT1P61830 136 aa-1.32□□□□□ -2.62
snR55snR55 SRL4Q03085 281 aa-1.32□□□□□ -2.62
snR55snR55 MATALPHA1P0CY06 175 aa-1.33□□□□□ -2.62
snR55snR55 HMLALPHA1P0CY07 175 aa-1.33□□□□□ -2.62
snR55snR55 MER1P16523 270 aa-1.33□□□□□ -2.62
snR55snR55 HTD2P38790 280 aaKnown RBP-1.33□□□□□ -2.62
snR55snR55 AIM2P39721 246 aa-1.33□□□□□ -2.62
snR55snR55 RNH1Q04740 348 aa-1.33□□□□□ -2.62
snR55snR55 ATG41Q12048 136 aa-1.33□□□□□ -2.62
snR55snR55 RPL28P02406 149 aaKnown RBP-1.34□□□□□ -2.62
snR55snR55 RHO1P06780 209 aaKnown RBP-1.34□□□□□ -2.62
snR55snR55 YLR283WQ05867 314 aa-1.34□□□□□ -2.62
snR55snR55 DAS2Q12084 232 aa-1.34□□□□□ -2.62
snR55snR55 YML100W-AQ8TGT0 57 aa-1.34□□□□□ -2.62
snR55snR55 ATP20Q12233 115 aa-1.35□□□□□ -2.63
snR55snR55 YDR157WA0A023PZE8 133 aa-1.36□□□□□ -2.63
snR55snR55 YBR027CP38220 110 aa-1.36□□□□□ -2.63
snR55snR55 YFL019CP43576 117 aa-1.36□□□□□ -2.63
snR55snR55 BNI1P41832 1953 aa-1.36□□□□□ -2.63
snR55snR55 URA2P07259 2214 aaKnown RBP-1.36□□□□□ -2.63
snR55snR55 YMR31P19955 123 aa-1.37□□□□□ -2.63
snR55snR55 RFC2P40348 353 aa-1.37□□□□□ -2.63
snR55snR55 APS3P47064 194 aa-1.37□□□□□ -2.63
snR55snR55 MDM32Q12171 622 aa-1.37□□□□□ -2.63
snR55snR55 MBF1O14467 151 aaKnown RBP-1.38□□□□□ -2.63
snR55snR55 RPL24BP24000 155 aaKnown RBP-1.38□□□□□ -2.63
snR55snR55 NTG1P31378 399 aa-1.38□□□□□ -2.63
snR55snR55 RRT1P38192 103 aa-1.38□□□□□ -2.63
snR55snR55 MIC12P38341 106 aa-1.38□□□□□ -2.63
snR55snR55 FMC1P40491 155 aa-1.38□□□□□ -2.63
snR55snR55 IRC18P47056 224 aa-1.38□□□□□ -2.63
snR55snR55 ADO1P47143 340 aaKnown RBP-1.38□□□□□ -2.63
snR55snR55 FAS2P19097 1887 aaKnown RBP-1.39□□□□□ -2.63
snR55snR55 TRM5P38793 499 aa-1.39□□□□□ -2.63
snR55snR55 GPI17Q04080 534 aa-1.39□□□□□ -2.63
snR55snR55 YMR321CQ04898 105 aa-1.39□□□□□ -2.63
snR55snR55 FUS2Q05670 677 aa-1.39□□□□□ -2.63
snR55snR55 VAM10Q08474 114 aa-1.39□□□□□ -2.63
snR55snR55 YOR381W-AQ3E804 55 aa-1.39□□□□□ -2.63
snR55snR55 MYO1P08964 1928 aa-1.39□□□□□ -2.63
snR55snR55 VMA6P32366 345 aaKnown RBP-1.4□□□□□ -2.63
snR55snR55 SPS18P32572 300 aa-1.4□□□□□ -2.63
snR55snR55 FMP23P38231 175 aa-1.4□□□□□ -2.63
snR55snR55 RTC3P38804 111 aaPredicted RBP-1.4□□□□□ -2.63
snR55snR55 TAF2P23255 1407 aa-1.4□□□□□ -2.63
snR55snR55 THP2O13539 261 aaKnown RBP-1.41□□□□□ -2.64
snR55snR55 MVB12P42939 101 aa-1.41□□□□□ -2.64
snR55snR55 TDA4P47153 279 aa-1.41□□□□□ -2.64
snR55snR55 FMN1Q03778 218 aa-1.41□□□□□ -2.64
snR55snR55 RIM9Q04734 239 aa-1.41□□□□□ -2.64
snR55snR55 YMR315WQ04869 349 aaKnown RBP-1.41□□□□□ -2.64
snR55snR55 YLR036CQ07986 203 aa-1.41□□□□□ -2.64
snR55snR55 YKL183C-AQ3E765 70 aa-1.41□□□□□ -2.64
snR55snR55 YCR016WP25617 290 aaKnown RBP-1.42□□□□□ -2.64
snR55snR55 NSA2P40078 261 aaKnown RBP-1.42□□□□□ -2.64
snR55snR55 YRA2P36036 203 aaKnown RBP RIP-Chip data-1.43□□□□□ -2.64not detected
snR55snR55 YCR087C-AP37263 153 aa-1.43□□□□□ -2.64
snR55snR55 ATG8P38182 117 aaRIP-Chip data-1.43□□□□□ -2.64not detected
snR55snR55 RFC4P40339 323 aaKnown RBP-1.44□□□□□ -2.64
snR55snR55 SBH1P52870 82 aa-1.44□□□□□ -2.64
snR55snR55 PET117Q02771 107 aa-1.44□□□□□ -2.64
snR55snR55 GLC8P41818 229 aa-1.45□□□□□ -2.64
snR55snR55 YPR127WQ06494 345 aa-1.45□□□□□ -2.64
snR55snR55 RIB3Q99258 208 aa-1.45□□□□□ -2.64
snR55snR55 YBR121C-AP0C5L4 52 aa-1.46□□□□□ -2.64
snR55snR55 YUH1P35127 236 aa-1.46□□□□□ -2.64
snR55snR55 NRK1P53915 240 aa-1.46□□□□□ -2.64
snR55snR55 GAL83Q04739 417 aa-1.46□□□□□ -2.64
snR55snR55 YLR031WQ07978 186 aa-1.46□□□□□ -2.64
snR55snR55 YDL157CQ12082 118 aa-1.46□□□□□ -2.64
snR55snR55 RPS24AP0CX31 135 aaKnown RBP-1.47□□□□□ -2.64
snR55snR55 RPS24BP0CX32 135 aaKnown RBP-1.47□□□□□ -2.64
snR55snR55 HSL1P34244 1518 aa-1.47□□□□□ -2.64
snR55snR55 RPS25BP0C0T4 108 aaKnown RBP-1.48□□□□□ -2.65
snR55snR55 YNL194CP40169 301 aa-1.48□□□□□ -2.65
snR55snR55 RUD3Q12234 484 aaKnown RBP-1.48□□□□□ -2.65
snR55snR55 YLR412C-AQ3E742 68 aa-1.48□□□□□ -2.65
snR55snR55 RPS25AQ3E792 108 aaPredicted RBP-1.48□□□□□ -2.65
snR55snR55 CMC4Q3E7A9 73 aa-1.48□□□□□ -2.65
snR55snR55 HUG1Q6Q5K6 68 aa-1.48□□□□□ -2.65
snR55snR55 MATALPHA2P0CY08 210 aa-1.49□□□□□ -2.65
snR55snR55 HMLALPHA2P0CY09 210 aa-1.49□□□□□ -2.65
snR55snR55 PHO13P19881 312 aa-1.49□□□□□ -2.65
snR55snR55 CAF4P36130 643 aa-1.49□□□□□ -2.65
snR55snR55 RTR1P40084 226 aaPredicted RBP-1.49□□□□□ -2.65
snR55snR55 YGR269WP40326 108 aa-1.49□□□□□ -2.65
snR55snR55 GEP7P53171 287 aa-1.49□□□□□ -2.65
snR55snR55 MRS1P07266 363 aa-1.5□□□□□ -2.65
snR55snR55 GCY1P14065 312 aaKnown RBP RIP-Chip data-1.5□□□□□ -2.65not detected
snR55snR55 SPT14P32363 452 aa-1.5□□□□□ -2.65
snR55snR55 NSG1P38837 291 aa-1.5□□□□□ -2.65
snR55snR55 GRX5Q02784 150 aa-1.5□□□□□ -2.65
snR55snR55 PRP18P33411 251 aaPredicted RBP-1.51□□□□□ -2.65
snR55snR55 YRB1P41920 201 aaKnown RBP-1.51□□□□□ -2.65
snR55snR55 TMA22P47089 198 aaPredicted RBP-1.51□□□□□ -2.65
snR55snR55 PAC10P48363 199 aa-1.51□□□□□ -2.65
snR55snR55 SOL1P50278 321 aa-1.51□□□□□ -2.65
snR55snR55 GRE1Q08969 168 aa-1.51□□□□□ -2.65
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms