RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	COX5A	P00424	153 aa		4.07	□□□□□ -1.76
snR19	snR19	CUP2	P15315	225 aa		4.07	□□□□□ -1.76
snR19	snR19	MIG1	P27705	504 aa		4.07	□□□□□ -1.76
snR19	snR19	PPA2	P28239	310 aa		4.07	□□□□□ -1.76
snR19	snR19	YKL187C	P34231	750 aa		4.07	□□□□□ -1.76
snR19	snR19	ASC1	P38011	319 aa	Known RBP	4.07	□□□□□ -1.76
snR19	snR19	MRPS9	P38120	278 aa		4.07	□□□□□ -1.76
snR19	snR19	IML3	P38265	245 aa		4.07	□□□□□ -1.76
snR19	snR19	HTD2	P38790	280 aa	Known RBP	4.07	□□□□□ -1.76
snR19	snR19	IRC22	P40006	225 aa		4.07	□□□□□ -1.76
snR19	snR19	RPL13B	P40212	199 aa	Known RBP	4.07	□□□□□ -1.76
snR19	snR19	PRM5	P40476	318 aa		4.07	□□□□□ -1.76
snR19	snR19	RPR2	P40571	144 aa		4.07	□□□□□ -1.76
snR19	snR19	POP1	P41812	875 aa		4.07	□□□□□ -1.76
snR19	snR19	SMD3	P43321	101 aa	Known RBP	4.07	□□□□□ -1.76
snR19	snR19	ERJ5	P43613	295 aa	Predicted RBP	4.07	□□□□□ -1.76
snR19	snR19	YGR149W	P48236	432 aa		4.07	□□□□□ -1.76
snR19	snR19	YGR015C	P53208	328 aa		4.07	□□□□□ -1.76
snR19	snR19	RNH201	P53942	307 aa		4.07	□□□□□ -1.76
snR19	snR19	LSM3	P57743	89 aa	Known RBP	4.07	□□□□□ -1.76
snR19	snR19	MRX8	Q05473	314 aa		4.07	□□□□□ -1.76
snR19	snR19	NOC4	Q06512	552 aa	Predicted RBP	4.07	□□□□□ -1.76
snR19	snR19	YLL056C	Q12177	298 aa		4.07	□□□□□ -1.76
snR19	snR19	COX19	Q3E731	98 aa		4.07	□□□□□ -1.76
snR19	snR19	YOR338W	Q99326	363 aa		4.07	□□□□□ -1.76
snR19	snR19	YCR022C	P25620	114 aa		4.06	□□□□□ -1.76
snR19	snR19	OAC1	P32332	324 aa		4.06	□□□□□ -1.76
snR19	snR19	DAD2	P36162	133 aa		4.06	□□□□□ -1.76
snR19	snR19	LSM2	P38203	95 aa	Known RBP	4.06	□□□□□ -1.76
snR19	snR19	NSA2	P40078	261 aa	Known RBP	4.06	□□□□□ -1.76
snR19	snR19	PAU5	P43575	122 aa		4.06	□□□□□ -1.76
snR19	snR19	YFL012W	P43580	148 aa		4.06	□□□□□ -1.76
snR19	snR19	HIT1	P46973	164 aa		4.06	□□□□□ -1.76
snR19	snR19	SFH5	P47008	294 aa		4.06	□□□□□ -1.76
snR19	snR19	YHC3	P47040	408 aa		4.06	□□□□□ -1.76
snR19	snR19	STE24	P47154	453 aa		4.06	□□□□□ -1.76
snR19	snR19	BNS1	P50084	137 aa		4.06	□□□□□ -1.76
snR19	snR19	PNC1	P53184	216 aa	Known RBP	4.06	□□□□□ -1.76
snR19	snR19	IGO1	P53897	168 aa		4.06	□□□□□ -1.76
snR19	snR19	UBC7	Q02159	165 aa		4.06	□□□□□ -1.76
snR19	snR19	EST3	Q03096	181 aa		4.06	□□□□□ -1.76
snR19	snR19	AYT1	Q12226	474 aa		4.06	□□□□□ -1.76
snR19	snR19	SEC4	P07560	215 aa	Known RBP	4.05	□□□□□ -1.76
snR19	snR19	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
snR19	snR19	YCR090C	P25654	182 aa	Known RBP	4.05	□□□□□ -1.76
snR19	snR19	RPL14B	P38754	138 aa	Known RBP	4.05	□□□□□ -1.76
snR19	snR19	COA1	P40452	197 aa		4.05	□□□□□ -1.76
snR19	snR19	PHS1	P40857	217 aa		4.05	□□□□□ -1.76
snR19	snR19	CDC40	P40968	455 aa	Predicted RBP	4.05	□□□□□ -1.76
snR19	snR19	PFS2	P42841	465 aa	Known RBP	4.05	□□□□□ -1.76
snR19	snR19	LST7	P53237	242 aa		4.05	□□□□□ -1.76
snR19	snR19	AIM34	Q03673	198 aa		4.05	□□□□□ -1.76
snR19	snR19	YMR166C	Q03829	368 aa		4.05	□□□□□ -1.76
snR19	snR19	CAB5	Q03941	241 aa		4.05	□□□□□ -1.76
snR19	snR19	GRX8	Q05926	109 aa		4.05	□□□□□ -1.76
snR19	snR19	KEI1	Q06346	221 aa		4.05	□□□□□ -1.76
snR19	snR19	PPT2	Q12036	173 aa		4.05	□□□□□ -1.76
snR19	snR19	BTS1	Q12051	335 aa		4.05	□□□□□ -1.76
snR19	snR19	YDL157C	Q12082	118 aa		4.05	□□□□□ -1.76
snR19	snR19	MCP1	Q12106	302 aa		4.05	□□□□□ -1.76
snR19	snR19	YOR097C	Q12274	175 aa	Predicted RBP	4.05	□□□□□ -1.76
snR19	snR19	DET1	Q99288	334 aa	Known RBP	4.05	□□□□□ -1.76
snR19	snR19	RAS2	P01120	322 aa	Known RBP	4.04	□□□□□ -1.76
snR19	snR19	VAR1	P02381	398 aa		4.04	□□□□□ -1.76
snR19	snR19	CYC3	P06182	269 aa		4.04	□□□□□ -1.76
snR19	snR19	RPL20A	P0CX23	172 aa	Known RBP	4.04	□□□□□ -1.76
snR19	snR19	RPL20B	P0CX24	172 aa	Predicted RBP	4.04	□□□□□ -1.76
snR19	snR19	COX10	P21592	462 aa		4.04	□□□□□ -1.76
snR19	snR19	FUN19	P28003	413 aa	Predicted RBP	4.04	□□□□□ -1.76
snR19	snR19	ZRT1	P32804	376 aa		4.04	□□□□□ -1.76
snR19	snR19	MIX23	P38162	196 aa		4.04	□□□□□ -1.76
snR19	snR19	YHR130C	P38834	111 aa		4.04	□□□□□ -1.76
snR19	snR19	YJL213W	P40896	331 aa		4.04	□□□□□ -1.76
snR19	snR19	YDL186W	P48568	277 aa		4.04	□□□□□ -1.76
snR19	snR19	CDC14	Q00684	551 aa		4.04	□□□□□ -1.76
snR19	snR19	HRI1	Q05905	244 aa	Known RBP	4.04	□□□□□ -1.76
snR19	snR19	YPR174C	Q06616	221 aa	Predicted RBP	4.04	□□□□□ -1.76
snR19	snR19	PRM3	Q08931	133 aa		4.04	□□□□□ -1.76
snR19	snR19	FCY22	Q12119	530 aa		4.04	□□□□□ -1.76
snR19	snR19	MDN1	Q12019	4910 aa	Known RBP	4.03	□□□□□ -1.76
snR19	snR19	YSR3	P23501	404 aa		4.03	□□□□□ -1.76
snR19	snR19	PCL1	P24867	279 aa		4.03	□□□□□ -1.76
snR19	snR19	TIP1	P27654	210 aa	Predicted RBP	4.03	□□□□□ -1.76
snR19	snR19	RAD23	P32628	398 aa	Known RBP	4.03	□□□□□ -1.76
snR19	snR19	PAU16	P35994	123 aa		4.03	□□□□□ -1.76
snR19	snR19	CBP4	P37267	147 aa		4.03	□□□□□ -1.76
snR19	snR19	ECM33	P38248	429 aa	Known RBP	4.03	□□□□□ -1.76
snR19	snR19	OXA1	P39952	402 aa		4.03	□□□□□ -1.76
snR19	snR19	YEL073C	P39974	107 aa		4.03	□□□□□ -1.76
snR19	snR19	PRE5	P40302	234 aa	Known RBP	4.03	□□□□□ -1.76
snR19	snR19	AYR1	P40471	297 aa		4.03	□□□□□ -1.76
snR19	snR19	RPA43	P46669	326 aa		4.03	□□□□□ -1.76
snR19	snR19	YGL262W	P53054	175 aa		4.03	□□□□□ -1.76
snR19	snR19	PDR16	P53860	351 aa	Known RBP	4.03	□□□□□ -1.76
snR19	snR19	YNL140C	P53910	189 aa		4.03	□□□□□ -1.76
snR19	snR19	THI74	Q04083	370 aa		4.03	□□□□□ -1.76
snR19	snR19	PAM18	Q07914	168 aa		4.03	□□□□□ -1.76
snR19	snR19	YOR385W	Q08909	290 aa		4.03	□□□□□ -1.76
snR19	snR19	TIR4	Q12218	487 aa	Predicted RBP	4.03	□□□□□ -1.76
snR19	snR19	YPL247C	Q12523	523 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms