RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W GAA1P39012 614 aa2.91□□□□□ -1.94
PRE2YPR103W BUD25P85052 153 aa2.91□□□□□ -1.94
PRE2YPR103W VPS13Q07878 3144 aa2.9□□□□□ -1.94
PRE2YPR103W YPR117WQ06116 2489 aa2.9□□□□□ -1.95
PRE2YPR103W YBR219CP38317 127 aa2.89□□□□□ -1.95
PRE2YPR103W YBR285WP38354 144 aa2.89□□□□□ -1.95
PRE2YPR103W BEM2P39960 2167 aaKnown RBP2.89□□□□□ -1.95
PRE2YPR103W YER135CP40082 130 aa2.89□□□□□ -1.95
PRE2YPR103W ARO80Q04052 950 aa2.89□□□□□ -1.95
PRE2YPR103W CKS1P20486 150 aaKnown RBP2.88□□□□□ -1.95
PRE2YPR103W HNT1Q04344 158 aaKnown RBP2.88□□□□□ -1.95
PRE2YPR103W YDR034W-BQ6Q5X2 51 aa2.88□□□□□ -1.95
PRE2YPR103W ATG40Q99325 256 aa2.88□□□□□ -1.95
PRE2YPR103W SAC3P46674 1301 aa2.88□□□□□ -1.95
PRE2YPR103W MBF1O14467 151 aaKnown RBP2.87□□□□□ -1.95
PRE2YPR103W OCH1P31755 480 aa2.87□□□□□ -1.95
PRE2YPR103W GLE2P40066 365 aa2.87□□□□□ -1.95
PRE2YPR103W FLO9P39712 1322 aa2.87□□□□□ -1.95
PRE2YPR103W YKR045CP36138 183 aa2.86□□□□□ -1.95
PRE2YPR103W ARP3P47117 449 aaKnown RBP2.86□□□□□ -1.95
PRE2YPR103W UBC12P52491 188 aa2.86□□□□□ -1.95
PRE2YPR103W POP3P53833 195 aaPredicted RBP2.86□□□□□ -1.95
PRE2YPR103W YNL247WP53852 767 aaKnown RBP2.86□□□□□ -1.95
PRE2YPR103W YLR162WQ06235 118 aa2.86□□□□□ -1.95
PRE2YPR103W TAO3P40468 2376 aa2.86□□□□□ -1.95
PRE2YPR103W KDX1P36005 433 aa2.85□□□□□ -1.95
PRE2YPR103W SHE2P36068 246 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
PRE2YPR103W VMA22P38784 181 aa2.85□□□□□ -1.95
PRE2YPR103W MPC3P53311 146 aa2.85□□□□□ -1.95
PRE2YPR103W YNL184CP53876 108 aa2.85□□□□□ -1.95
PRE2YPR103W CSI2Q08054 341 aa2.85□□□□□ -1.95
PRE2YPR103W IGO2Q9P305 131 aa2.84□□□□□ -1.95
PRE2YPR103W YLR236CA0A023PZG4 107 aa2.83□□□□□ -1.96
PRE2YPR103W SKI6P46948 246 aaPredicted RBP2.83□□□□□ -1.96
PRE2YPR103W ANT1Q06497 328 aa2.83□□□□□ -1.96
PRE2YPR103W YBR209WP38311 105 aa2.82□□□□□ -1.96
PRE2YPR103W YEA4P40004 342 aa2.82□□□□□ -1.96
PRE2YPR103W YFH7P43591 353 aa2.82□□□□□ -1.96
PRE2YPR103W YJR111CP47148 283 aaKnown RBP2.82□□□□□ -1.96
PRE2YPR103W KNH1P50112 268 aa2.82□□□□□ -1.96
PRE2YPR103W GIM3P53900 129 aa2.82□□□□□ -1.96
PRE2YPR103W RIO1Q12196 484 aaKnown RBP2.82□□□□□ -1.96
PRE2YPR103W ODC2Q99297 307 aa2.82□□□□□ -1.96
PRE2YPR103W POR1P04840 283 aaKnown RBP2.81□□□□□ -1.96
PRE2YPR103W ARO8P53090 500 aaKnown RBP2.81□□□□□ -1.96
PRE2YPR103W YCR090CP25654 182 aaKnown RBP2.8□□□□□ -1.96
PRE2YPR103W PAN3P36102 679 aaPredicted RBP2.8□□□□□ -1.96
PRE2YPR103W SER2P42941 309 aa2.8□□□□□ -1.96
PRE2YPR103W ERJ5P43613 295 aaPredicted RBP2.8□□□□□ -1.96
PRE2YPR103W SAY1P53324 424 aa2.8□□□□□ -1.96
PRE2YPR103W YOL162WP0CF19 215 aa2.79□□□□□ -1.96
PRE2YPR103W CUP1-1P0CX80 61 aa2.79□□□□□ -1.96
PRE2YPR103W CUP1-2P0CX81 61 aa2.79□□□□□ -1.96
PRE2YPR103W SPO13P23624 291 aa2.79□□□□□ -1.96
PRE2YPR103W ARC19P33204 171 aaKnown RBP2.79□□□□□ -1.96
PRE2YPR103W FMP23P38231 175 aa2.79□□□□□ -1.96
PRE2YPR103W FUS2Q05670 677 aa2.79□□□□□ -1.96
PRE2YPR103W NOC4Q06512 552 aaPredicted RBP2.79□□□□□ -1.96
PRE2YPR103W DGA1Q08650 418 aa2.79□□□□□ -1.96
PRE2YPR103W YDR524C-BQ3E6R4 66 aa2.79□□□□□ -1.96
PRE2YPR103W DUR1,2P32528 1835 aaKnown RBP2.79□□□□□ -1.96
PRE2YPR103W YGL010WP25338 174 aa2.78□□□□□ -1.96
PRE2YPR103W TFC1P32367 649 aa2.78□□□□□ -1.96
PRE2YPR103W YBR220CP38318 560 aa2.78□□□□□ -1.96
PRE2YPR103W PDS1P40316 373 aaPredicted RBP2.78□□□□□ -1.96
PRE2YPR103W YOL024WQ08172 172 aa2.78□□□□□ -1.96
PRE2YPR103W UBR2Q07963 1872 aa2.77□□□□□ -1.97
PRE2YPR103W RAD50P12753 1312 aa2.77□□□□□ -1.97
PRE2YPR103W RPL2AP0CX45 254 aaKnown RBP2.77□□□□□ -1.97
PRE2YPR103W RPL2BP0CX46 254 aaKnown RBP2.77□□□□□ -1.97
PRE2YPR103W TAH1P25638 111 aaPredicted RBP2.77□□□□□ -1.97
PRE2YPR103W NUF2P33895 451 aa2.77□□□□□ -1.97
PRE2YPR103W UPS2P35200 230 aa2.77□□□□□ -1.97
PRE2YPR103W TMA19P35691 167 aaKnown RBP2.77□□□□□ -1.97
PRE2YPR103W RTC4P53850 401 aa2.77□□□□□ -1.97
PRE2YPR103W NUP49Q02199 472 aa2.77□□□□□ -1.97
PRE2YPR103W ATG38Q05789 226 aaKnown RBP2.77□□□□□ -1.97
PRE2YPR103W GRX8Q05926 109 aa2.77□□□□□ -1.97
PRE2YPR103W YOL014WQ08110 124 aa2.77□□□□□ -1.97
PRE2YPR103W GRE1Q08969 168 aa2.77□□□□□ -1.97
PRE2YPR103W YMR099CQ03161 297 aaKnown RBP2.76□□□□□ -1.97
PRE2YPR103W NAT3Q06504 195 aa2.76□□□□□ -1.97
PRE2YPR103W RAD28Q12021 506 aa2.76□□□□□ -1.97
PRE2YPR103W ECM29P38737 1868 aa2.75□□□□□ -1.97
PRE2YPR103W SNF4P12904 322 aa2.75□□□□□ -1.97
PRE2YPR103W SEC11P15367 167 aa2.75□□□□□ -1.97
PRE2YPR103W YER034WP40022 185 aaKnown RBP2.75□□□□□ -1.97
PRE2YPR103W RIO2P40160 425 aaKnown RBP2.75□□□□□ -1.97
PRE2YPR103W RPL13BP40212 199 aaKnown RBP2.75□□□□□ -1.97
PRE2YPR103W NRK1P53915 240 aa2.75□□□□□ -1.97
PRE2YPR103W SNO1Q03144 224 aa2.75□□□□□ -1.97
PRE2YPR103W CUE4Q04201 117 aaPredicted RBP2.75□□□□□ -1.97
PRE2YPR103W SMD2Q06217 110 aaKnown RBP2.75□□□□□ -1.97
PRE2YPR103W RPL13AQ12690 199 aaPredicted RBP2.75□□□□□ -1.97
PRE2YPR103W TOR1P35169 2470 aa2.74□□□□□ -1.97
PRE2YPR103W YAR023CD6VPM8 179 aa2.74□□□□□ -1.97
PRE2YPR103W ATP7P30902 174 aa2.74□□□□□ -1.97
PRE2YPR103W AIM2P39721 246 aa2.74□□□□□ -1.97
PRE2YPR103W HOP2P53187 214 aa2.74□□□□□ -1.97
PRE2YPR103W RPL40AP0CH08 128 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 108.8 ms