RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	RPA34	P47006	233 aa	Predicted RBP	3.19	□□□□□ -1.9
FDH1	YOR388C	SFH5	P47008	294 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	COX16	P47081	118 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	YJR012C	P47087	207 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	YLR460C	P54007	376 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	YMR181C	Q03231	154 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	YML018C	Q03730	393 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	YDR248C	Q03786	193 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	SEI1	Q06058	285 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	FRQ1	Q06389	190 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	TIM18	Q08749	192 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	REX3	Q12090	404 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	FYV7	Q12247	151 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	RAX2	Q12465	1220 aa		3.19	□□□□□ -1.9
FDH1	YOR388C	PAR32	Q12515	295 aa	Known RBP	3.19	□□□□□ -1.9
FDH1	YOR388C	RPS25A	Q3E792	108 aa	Predicted RBP	3.19	□□□□□ -1.9
FDH1	YOR388C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.19	□□□□□ -1.9
FDH1	YOR388C	SEC16	P48415	2195 aa	Known RBP	3.19	□□□□□ -1.9
FDH1	YOR388C	UTP20	P35194	2493 aa	Known RBP	3.19	□□□□□ -1.9
FDH1	YOR388C	CTA1	P15202	515 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	LSB5	P25369	354 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	ERG3	P32353	365 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	ARO4	P32449	370 aa	Known RBP	3.18	□□□□□ -1.9
FDH1	YOR388C	YOR062C	P36025	268 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	YKL071W	P36086	256 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	SLM6	P38343	150 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	WSS1	P38838	269 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	NSA2	P40078	261 aa	Known RBP	3.18	□□□□□ -1.9
FDH1	YOR388C	YFR054C	P43622	192 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	CCC1	P47818	322 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	ALG9	P53868	555 aa	Known RBP	3.18	□□□□□ -1.9
FDH1	YOR388C	NCE101	Q02820	53 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	PKR1	Q03880	122 aa	Known RBP	3.18	□□□□□ -1.9
FDH1	YOR388C	YMR082C	Q04276	118 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	MIX14	Q04341	121 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	TVP18	Q04767	167 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	FSH2	Q05015	223 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	COQ10	Q08058	207 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	POM33	Q12164	279 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	YCT1	Q12235	531 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	ATG5	Q12380	294 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	YOR032W-A	Q8TGS1	66 aa		3.18	□□□□□ -1.9
FDH1	YOR388C	QCR2	P07257	368 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	RPS8A	P0CX39	200 aa	Known RBP	3.17	□□□□□ -1.9
FDH1	YOR388C	RPS8B	P0CX40	200 aa	Known RBP	3.17	□□□□□ -1.9
FDH1	YOR388C	RNA15	P25299	296 aa	Predicted RBP	3.17	□□□□□ -1.9
FDH1	YOR388C	YBR292C	P38357	123 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	YEA4	P40004	342 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	YER188W	P40103	239 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	CDC40	P40968	455 aa	Predicted RBP	3.17	□□□□□ -1.9
FDH1	YOR388C	GLC8	P41818	229 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	NSA1	P53136	463 aa	Predicted RBP	3.17	□□□□□ -1.9
FDH1	YOR388C	SAE3	P89114	91 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	CWC27	Q02770	301 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	THI74	Q04083	370 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	SHH3	Q04487	196 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	MRX8	Q05473	314 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	HRT1	Q08273	121 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	VAM3	Q12241	283 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	MCT1	Q12283	360 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	YOP1	Q12402	180 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	COA2	Q3E823	68 aa		3.17	□□□□□ -1.9
FDH1	YOR388C	BLM10	P43583	2143 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	YHR214C-D	P0CX93	97 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	UPS2	P35200	230 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	PGU1	P47180	361 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	PAU4	P53427	120 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	YNR048W	P53740	393 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	YPL067C	Q02754	198 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	VPS28	Q02767	242 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	PET191	Q02772	108 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	CSI2	Q08054	341 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	NAT5	Q08689	176 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	Q0144	Q9ZZW2	109 aa		3.16	□□□□□ -1.9
FDH1	YOR388C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
FDH1	YOR388C	OPI3	P05375	206 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PAU1	P0CE88	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PAU14	P0CE89	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PAU6	P0CE90	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PAU18	P0CE91	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PAU8	P0CE92	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PAU11	P0CE93	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	NHP6A	P11632	93 aa	Known RBP	3.15	□□□□□ -1.91
FDH1	YOR388C	PDX1	P16451	410 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PRE1	P22141	198 aa	Known RBP	3.15	□□□□□ -1.91
FDH1	YOR388C	CPR2	P23285	205 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	YCR025C	P25352	136 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PEX4	P29340	183 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	AHT1	P29589	182 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	RPL14A	P36105	138 aa	Known RBP	3.15	□□□□□ -1.91
FDH1	YOR388C	POP7	P38291	140 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	SSH1	P38353	490 aa	Known RBP	3.15	□□□□□ -1.91
FDH1	YOR388C	CUE1	P38428	203 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	YMR262W	P38430	313 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	PAU13	P38725	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	RPL14B	P38754	138 aa	Known RBP	3.15	□□□□□ -1.91
FDH1	YOR388C	IRC22	P40006	225 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	RPL13B	P40212	199 aa	Known RBP	3.15	□□□□□ -1.91
FDH1	YOR388C	PAU10	Q03050	120 aa		3.15	□□□□□ -1.91
FDH1	YOR388C	SDC1	Q03323	175 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms