RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	RRT5	P43607	289 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	CIN2	P46670	268 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	UBC11	P52492	156 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	SBH1	P52870	82 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	SCS22	Q6Q595	175 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	UBA3	Q99344	299 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	YDR157W	A0A023PZE8	133 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	RPS13	P05756	151 aa	Known RBP	6.21	□□□□□ -1.42
MSB3	YNL293W	MSI1	P13712	422 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	BET2	P20133	325 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	NFS1	P25374	497 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	ERG24	P32462	438 aa	Known RBP	6.21	□□□□□ -1.42
MSB3	YNL293W	APQ12	P40532	138 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	AIM11	P87275	137 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	RAV2	Q03956	351 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	YMR082C	Q04276	118 aa		6.21	□□□□□ -1.42
MSB3	YNL293W	CPR2	P23285	205 aa		6.2	□□□□□ -1.42
MSB3	YNL293W	PRE2	P30656	287 aa	Known RBP	6.2	□□□□□ -1.42
MSB3	YNL293W	AIM26	P32858	118 aa		6.2	□□□□□ -1.42
MSB3	YNL293W	FSH2	Q05015	223 aa		6.2	□□□□□ -1.42
MSB3	YNL293W	FCF1	Q05498	189 aa	Predicted RBP	6.2	□□□□□ -1.42
MSB3	YNL293W	STP4	Q07351	490 aa		6.2	□□□□□ -1.42
MSB3	YNL293W	YPL264C	Q08980	353 aa		6.2	□□□□□ -1.42
MSB3	YNL293W	SLM3	Q12093	417 aa		6.2	□□□□□ -1.42
MSB3	YNL293W	HIP1	P06775	603 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	YMC1	P32331	307 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	IXR1	P33417	597 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	MRPL27	P36526	146 aa	Predicted RBP	6.19	□□□□□ -1.42
MSB3	YNL293W	TOS2	P50078	622 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU4	P53427	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	EFM6	P53970	246 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	YMR320W	Q04897	101 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	HRT1	Q08273	121 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PEX11	Q12462	236 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU1	P0CE88	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU14	P0CE89	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU6	P0CE90	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU18	P0CE91	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU8	P0CE92	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU11	P0CE93	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	KRE1	P17260	313 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	GLN3	P18494	730 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	YGL010W	P25338	174 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU13	P38725	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	GZF3	P42944	551 aa	Known RBP	6.19	□□□□□ -1.42
MSB3	YNL293W	YFR045W	P43617	309 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PGA1	P53896	198 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU10	Q03050	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PAU20	Q08322	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	SME1	Q12330	94 aa	Predicted RBP	6.19	□□□□□ -1.42
MSB3	YNL293W	PAU9	Q3E770	120 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	YCR024C-B	Q3E7Z8	88 aa		6.19	□□□□□ -1.42
MSB3	YNL293W	PHO85	P17157	305 aa		6.18	□□□□□ -1.42
MSB3	YNL293W	YMR31	P19955	123 aa		6.18	□□□□□ -1.42
MSB3	YNL293W	MRP21	P38175	177 aa		6.18	□□□□□ -1.42
MSB3	YNL293W	ECM14	P38836	430 aa		6.18	□□□□□ -1.42
MSB3	YNL293W	NCE103	P53615	221 aa		6.18	□□□□□ -1.42
MSB3	YNL293W	FUB1	P25659	250 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	ARC40	P38328	384 aa	Known RBP	6.17	□□□□□ -1.42
MSB3	YNL293W	YGP1	P38616	354 aa	Known RBP	6.17	□□□□□ -1.42
MSB3	YNL293W	YFR020W	P43600	232 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	RPL21A	Q02753	160 aa	Known RBP	6.17	□□□□□ -1.42
MSB3	YNL293W	UPS1	Q05776	175 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	YDR029W	Q12111	104 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	YPR071W	Q12346	211 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	RPL21B	Q12672	160 aa	Known RBP	6.17	□□□□□ -1.42
MSB3	YNL293W	TAD3	Q9URQ3	322 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	OPI3	P05375	206 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	CHO1	P08456	276 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	MKK1	P32490	508 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	IML3	P38265	245 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	YEL028W	P39989	153 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	GON7	P46984	123 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	LCB3	P47013	409 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	SCW4	P53334	386 aa	Known RBP	6.17	□□□□□ -1.42
MSB3	YNL293W	RIM9	Q04734	239 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	YDL218W	Q07629	317 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	YOL073C	Q08232	322 aa		6.17	□□□□□ -1.42
MSB3	YNL293W	MRH1	Q12117	320 aa	Predicted RBP	6.17	□□□□□ -1.42
MSB3	YNL293W	ECM12	O13529	151 aa		6.16	□□□□□ -1.42
MSB3	YNL293W	HEM4	P06174	275 aa		6.16	□□□□□ -1.42
MSB3	YNL293W	ERV1	P27882	189 aa		6.16	□□□□□ -1.42
MSB3	YNL293W	GPX1	P36014	167 aa		6.16	□□□□□ -1.42
MSB3	YNL293W	XBP1	P40489	647 aa		6.16	□□□□□ -1.42
MSB3	YNL293W	ERG13	P54839	491 aa	Known RBP	6.16	□□□□□ -1.42
MSB3	YNL293W	CDC21	P06785	304 aa		6.15	□□□□□ -1.42
MSB3	YNL293W	YCR100C	P25606	316 aa		6.15	□□□□□ -1.42
MSB3	YNL293W	SPS18	P32572	300 aa		6.15	□□□□□ -1.42
MSB3	YNL293W	PRS4	P38063	326 aa	Predicted RBP	6.15	□□□□□ -1.42
MSB3	YNL293W	YMR090W	Q04304	227 aa	Known RBP	6.15	□□□□□ -1.42
MSB3	YNL293W	HNT3	Q08702	217 aa		6.15	□□□□□ -1.42
MSB3	YNL293W	RDL2	Q08742	149 aa	Known RBP	6.15	□□□□□ -1.42
MSB3	YNL293W	FIT3	Q08907	204 aa		6.15	□□□□□ -1.42
MSB3	YNL293W	YDR215C	Q12240	137 aa		6.15	□□□□□ -1.42
MSB3	YNL293W	KTI11	Q3E840	82 aa		6.15	□□□□□ -1.42
MSB3	YNL293W	ECM29	P38737	1868 aa		6.15	□□□□□ -1.43
MSB3	YNL293W	FMP49	A0A023PZB3	126 aa		6.15	□□□□□ -1.43
MSB3	YNL293W	COX9	P07255	59 aa		6.15	□□□□□ -1.43
MSB3	YNL293W	SWD2	P36104	329 aa	Predicted RBP	6.15	□□□□□ -1.43
MSB3	YNL293W	VID24	P38263	362 aa		6.15	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms