RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	MDM35	O60200	86 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	RPL28	P02406	149 aa	Known RBP	0.42	□□□□□ -2.34
UBC7	YMR022W	SRY1	P36007	326 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	RMD6	P39975	231 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	PEX17	P40155	199 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	YFL051C	P43552	160 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	HOC1	P47124	396 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	MCM22	P47167	239 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	LPP1	Q04396	274 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	CDC123	Q05791	360 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	ATG31	Q12421	196 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	RRP36	Q12481	300 aa	Predicted RBP	0.42	□□□□□ -2.34
UBC7	YMR022W	YPL229W	Q99395	206 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	Q0144	Q9ZZW2	109 aa		0.42	□□□□□ -2.34
UBC7	YMR022W	YFR010W-A	P0C5N0	62 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	URA6	P15700	204 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	RPL24B	P24000	155 aa	Known RBP	0.41	□□□□□ -2.34
UBC7	YMR022W	PPA2	P28239	310 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	BMH2	P34730	273 aa	Known RBP	0.41	□□□□□ -2.34
UBC7	YMR022W	APS1	P35181	156 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	RPS27A	P35997	82 aa	Known RBP	0.41	□□□□□ -2.34
UBC7	YMR022W	VPS21	P36017	210 aa	Known RBP	0.41	□□□□□ -2.34
UBC7	YMR022W	YKL075C	P36083	450 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	OPY1	P38271	328 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	POP4	P38336	279 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	URA8	P38627	578 aa	Predicted RBP	0.41	□□□□□ -2.34
UBC7	YMR022W	RPS27B	P38711	82 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	YFR035C	P43608	114 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	BXI1	P48558	297 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	KNH1	P50112	268 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	YNR077C	P53758	84 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	POP3	P53833	195 aa	Predicted RBP	0.41	□□□□□ -2.34
UBC7	YMR022W	FYV6	P53913	173 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	YNL010W	P53981	241 aa	Known RBP	0.41	□□□□□ -2.34
UBC7	YMR022W	DID2	P69771	204 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	SRL4	Q03085	281 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	YPR114W	Q06107	315 aa		0.41	□□□□□ -2.34
UBC7	YMR022W	REP2	P03872	296 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	RHO1	P06780	209 aa	Known RBP	0.4	□□□□□ -2.35
UBC7	YMR022W	MATALPHA1	P0CY06	175 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	HMLALPHA1	P0CY07	175 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	SEC14	P24280	304 aa	Known RBP	0.4	□□□□□ -2.35
UBC7	YMR022W	VMA6	P32366	345 aa	Known RBP	0.4	□□□□□ -2.35
UBC7	YMR022W	MGM101	P32787	269 aa	Known RBP	0.4	□□□□□ -2.35
UBC7	YMR022W	ECM4	P36156	370 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	MIC12	P38341	106 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	CYC2	P38909	366 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	YJR149W	P47177	404 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	CWC27	Q02770	301 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	DIG2	Q03373	323 aa	Known RBP	0.4	□□□□□ -2.35
UBC7	YMR022W	TRM12	Q04235	462 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	SMD2	Q06217	110 aa	Known RBP	0.4	□□□□□ -2.35
UBC7	YMR022W	JLP1	Q12358	412 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	TDA8	Q6B2U8	126 aa		0.4	□□□□□ -2.35
UBC7	YMR022W	CDC28	P00546	298 aa	Known RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	RPL25	P04456	142 aa	Known RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	SPT3	P06844	337 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	YLR156W	P0CE96	114 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	YLR159W	P0CE97	114 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	YLR161W	P0CE98	114 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	URA5	P13298	226 aa	Known RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	PTM1	P32857	523 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	YEL073C	P39974	107 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	FLX1	P40464	311 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	RPS29A	P41057	56 aa	Known RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	YRB1	P41920	201 aa	Known RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	YAE1	P47118	141 aa	Predicted RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	ADO1	P47143	340 aa	Known RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	MIC26	P50087	233 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	SOL1	P50278	321 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	SWP1	Q02795	286 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	CUE4	Q04201	117 aa	Predicted RBP	0.39	□□□□□ -2.35
UBC7	YMR022W	YLR283W	Q05867	314 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	RAF1	Q06891	181 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	NCB2	Q92317	146 aa		0.39	□□□□□ -2.35
UBC7	YMR022W	THP2	O13539	261 aa	Known RBP	0.38	□□□□□ -2.35
UBC7	YMR022W	TIM9	O74700	87 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	AQY2	P0CD90	149 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	YHR212W-A	P0CX91	67 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	NHP6B	P11633	99 aa	Known RBP	0.38	□□□□□ -2.35
UBC7	YMR022W	KSS1	P14681	368 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	STE18	P18852	110 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	YMR31	P19955	123 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	CKS1	P20486	150 aa	Known RBP	0.38	□□□□□ -2.35
UBC7	YMR022W	MAG1	P22134	296 aa	Known RBP	0.38	□□□□□ -2.35
UBC7	YMR022W	BET1	P22804	142 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.38	□□□□□ -2.35	not detected
UBC7	YMR022W	NTF2	P33331	125 aa	Known RBP	0.38	□□□□□ -2.35
UBC7	YMR022W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.38	□□□□□ -2.35	not detected
UBC7	YMR022W	MRPL17	P36528	281 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	FMP23	P38231	175 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	YBR285W	P38354	144 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	TRM5	P38793	499 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	IRC22	P40006	225 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	YER085C	P40058	173 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	GVP36	P40531	326 aa	Known RBP	0.38	□□□□□ -2.35
UBC7	YMR022W	FAR7	P43592	221 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	BRR6	P53062	197 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	ALG13	P53178	202 aa		0.38	□□□□□ -2.35
UBC7	YMR022W	PGA2	P53903	129 aa		0.38	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 8287.9 ms