RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C TFC1P32367 649 aa1.35□□□□□ -2.19
UBP11YKR098C PAM17P36147 197 aa1.35□□□□□ -2.19
UBP11YKR098C PEP8P40335 379 aa1.35□□□□□ -2.19
UBP11YKR098C XPT1P47165 209 aa1.35□□□□□ -2.19
UBP11YKR098C SAY1P53324 424 aa1.35□□□□□ -2.19
UBP11YKR098C BUD25P85052 153 aa1.35□□□□□ -2.19
UBP11YKR098C TMA20P89886 181 aaPredicted RBP1.35□□□□□ -2.19
UBP11YKR098C YMR253CQ04835 414 aa1.35□□□□□ -2.19
UBP11YKR098C MET5P47169 1442 aa1.35□□□□□ -2.19
UBP11YKR098C CYR1P08678 2026 aaKnown RBP1.35□□□□□ -2.19
UBP11YKR098C YLR422WQ06409 1932 aa1.34□□□□□ -2.19
UBP11YKR098C UBI4P0CG63 381 aaKnown RBP1.34□□□□□ -2.19
UBP11YKR098C SLM6P38343 150 aa1.34□□□□□ -2.19
UBP11YKR098C NSA2P40078 261 aaKnown RBP1.34□□□□□ -2.19
UBP11YKR098C YGL101WP53144 215 aa1.34□□□□□ -2.19
UBP11YKR098C YNL033WP53964 284 aa1.34□□□□□ -2.19
UBP11YKR098C MAK3Q03503 176 aa1.34□□□□□ -2.19
UBP11YKR098C THI74Q04083 370 aa1.34□□□□□ -2.19
UBP11YKR098C GAL83Q04739 417 aa1.34□□□□□ -2.19
UBP11YKR098C YOR214CQ12282 236 aa1.34□□□□□ -2.19
UBP11YKR098C PET20Q99373 253 aa1.34□□□□□ -2.19
UBP11YKR098C SBH1P52870 82 aa1.34□□□□□ -2.2
UBP11YKR098C SBH2P52871 88 aa1.34□□□□□ -2.2
UBP11YKR098C RNH202Q05635 350 aa1.34□□□□□ -2.2
UBP11YKR098C YPR127WQ06494 345 aa1.34□□□□□ -2.2
UBP11YKR098C ANT1Q06497 328 aa1.34□□□□□ -2.2
UBP11YKR098C YPR202WQ08993 238 aa1.34□□□□□ -2.2
UBP11YKR098C EFG1Q3E705 233 aaKnown RBP1.34□□□□□ -2.2
UBP11YKR098C YKR045CP36138 183 aa1.33□□□□□ -2.2
UBP11YKR098C STP22P25604 385 aa1.32□□□□□ -2.2
UBP11YKR098C TMA19P35691 167 aaKnown RBP1.32□□□□□ -2.2
UBP11YKR098C RRT1P38192 103 aa1.32□□□□□ -2.2
UBP11YKR098C YPL073CP40323 161 aa1.32□□□□□ -2.2
UBP11YKR098C ORM1P53224 222 aa1.32□□□□□ -2.2
UBP11YKR098C FLO9P39712 1322 aa1.32□□□□□ -2.2
UBP11YKR098C HSP30P25619 332 aa1.32□□□□□ -2.2
UBP11YKR098C NUF2P33895 451 aa1.32□□□□□ -2.2
UBP11YKR098C YBR219CP38317 127 aa1.32□□□□□ -2.2
UBP11YKR098C YBR220CP38318 560 aa1.32□□□□□ -2.2
UBP11YKR098C NQM1P53228 333 aaPredicted RBP1.32□□□□□ -2.2
UBP11YKR098C TIM13P53299 105 aa1.32□□□□□ -2.2
UBP11YKR098C LSM3P57743 89 aaKnown RBP1.32□□□□□ -2.2
UBP11YKR098C YKR005CQ02203 525 aa1.32□□□□□ -2.2
UBP11YKR098C YPR013CQ12145 317 aa1.32□□□□□ -2.2
UBP11YKR098C YLR046CQ12253 270 aa1.32□□□□□ -2.2
UBP11YKR098C BUB2P26448 306 aaPredicted RBP1.31□□□□□ -2.2
UBP11YKR098C DAD4P69851 72 aa1.31□□□□□ -2.2
UBP11YKR098C VPS28Q02767 242 aa1.31□□□□□ -2.2
UBP11YKR098C YDR476CQ03362 224 aa1.31□□□□□ -2.2
UBP11YKR098C YPR174CQ06616 221 aaPredicted RBP1.31□□□□□ -2.2
UBP11YKR098C RPL2AP0CX45 254 aaKnown RBP1.31□□□□□ -2.2
UBP11YKR098C RPL2BP0CX46 254 aaKnown RBP1.31□□□□□ -2.2
UBP11YKR098C YHL018WP38744 120 aaPredicted RBP1.31□□□□□ -2.2
UBP11YKR098C APQ12P40532 138 aa1.31□□□□□ -2.2
UBP11YKR098C GLR1P41921 483 aaKnown RBP1.31□□□□□ -2.2
UBP11YKR098C THG1P53215 237 aaKnown RBP1.31□□□□□ -2.2
UBP11YKR098C YDC1Q02896 317 aa1.31□□□□□ -2.2
UBP11YKR098C YLR162WQ06235 118 aa1.31□□□□□ -2.2
UBP11YKR098C PRP11Q07350 266 aaPredicted RBP1.31□□□□□ -2.2
UBP11YKR098C BEM2P39960 2167 aaKnown RBP1.3□□□□□ -2.2
UBP11YKR098C UBC8P28263 218 aa1.3□□□□□ -2.2
UBP11YKR098C SRP102P36057 244 aaPredicted RBP1.3□□□□□ -2.2
UBP11YKR098C DLS1P40366 167 aa1.3□□□□□ -2.2
UBP11YKR098C PST2Q12335 198 aaKnown RBP1.3□□□□□ -2.2
UBP11YKR098C RAD6P06104 172 aa1.3□□□□□ -2.2
UBP11YKR098C PET54P10834 293 aa1.3□□□□□ -2.2
UBP11YKR098C RPL30P14120 105 aaKnown RBP1.3□□□□□ -2.2
UBP11YKR098C PEX34P25584 144 aa1.3□□□□□ -2.2
UBP11YKR098C YEL028WP39989 153 aa1.3□□□□□ -2.2
UBP11YKR098C CSI2Q08054 341 aa1.3□□□□□ -2.2
UBP11YKR098C YOR381W-AQ3E804 55 aa1.3□□□□□ -2.2
UBP11YKR098C MSB2P32334 1306 aa1.29□□□□□ -2.2
UBP11YKR098C COX8P04039 78 aa1.29□□□□□ -2.2
UBP11YKR098C ATP5P09457 212 aa1.29□□□□□ -2.2
UBP11YKR098C GSP2P32836 220 aaKnown RBP1.29□□□□□ -2.2
UBP11YKR098C YER135CP40082 130 aa1.29□□□□□ -2.2
UBP11YKR098C MOG1P47123 218 aa1.29□□□□□ -2.2
UBP11YKR098C PIR1Q03178 341 aa1.29□□□□□ -2.2
UBP11YKR098C SYM1Q06563 197 aa1.29□□□□□ -2.2
UBP11YKR098C YOR015WQ12169 119 aa1.29□□□□□ -2.2
UBP11YKR098C DUR1,2P32528 1835 aaKnown RBP1.29□□□□□ -2.2
UBP11YKR098C MDM35O60200 86 aa1.28□□□□□ -2.2
UBP11YKR098C PBI2P0CT04 75 aaKnown RBP1.28□□□□□ -2.2
UBP11YKR098C SFK1P35735 353 aa1.28□□□□□ -2.2
UBP11YKR098C RIO2P40160 425 aaKnown RBP1.28□□□□□ -2.2
UBP11YKR098C DML1Q03652 475 aa1.28□□□□□ -2.2
UBP11YKR098C RIM9Q04734 239 aa1.28□□□□□ -2.2
UBP11YKR098C TRM3Q07527 1436 aa1.28□□□□□ -2.2
UBP11YKR098C YEL073CP39974 107 aa1.28□□□□□ -2.2
UBP11YKR098C FIP1P45976 327 aa1.28□□□□□ -2.2
UBP11YKR098C LSM1P47017 172 aaKnown RBP1.28□□□□□ -2.2
UBP11YKR098C YHR007C-AQ07074 71 aa1.28□□□□□ -2.2
UBP11YKR098C FIT2Q08906 153 aa1.28□□□□□ -2.2
UBP11YKR098C HHT1P61830 136 aa1.27□□□□□ -2.21
UBP11YKR098C PKR1Q03880 122 aaKnown RBP1.27□□□□□ -2.21
UBP11YKR098C UPS1Q05776 175 aa1.27□□□□□ -2.21
UBP11YKR098C ATG41Q12048 136 aa1.27□□□□□ -2.21
UBP11YKR098C PTC1P35182 281 aa1.27□□□□□ -2.21
UBP11YKR098C UPS2P35200 230 aa1.27□□□□□ -2.21
UBP11YKR098C IPI1P38803 334 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 792.9 ms