RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W EFG1Q3E705 233 aaKnown RBP2.44□□□□□ -2.02
CTK1YKL139W YHR086W-AQ3E746 53 aa2.44□□□□□ -2.02
CTK1YKL139W UBI4P0CG63 381 aaKnown RBP2.44□□□□□ -2.02
CTK1YKL139W NRG2P38082 220 aa2.44□□□□□ -2.02
CTK1YKL139W DSE2P38844 325 aa2.44□□□□□ -2.02
CTK1YKL139W NSA2P40078 261 aaKnown RBP2.44□□□□□ -2.02
CTK1YKL139W NQM1P53228 333 aaPredicted RBP2.44□□□□□ -2.02
CTK1YKL139W GAL83Q04739 417 aa2.44□□□□□ -2.02
CTK1YKL139W SML1Q04964 104 aa2.44□□□□□ -2.02
CTK1YKL139W IDP1P21954 428 aaKnown RBP2.43□□□□□ -2.02
CTK1YKL139W FYV4P38783 130 aaPredicted RBP2.43□□□□□ -2.02
CTK1YKL139W VMA22P38784 181 aa2.43□□□□□ -2.02
CTK1YKL139W YNL200CP40165 246 aaKnown RBP2.43□□□□□ -2.02
CTK1YKL139W SAY1P53324 424 aa2.43□□□□□ -2.02
CTK1YKL139W CUE4Q04201 117 aaPredicted RBP2.43□□□□□ -2.02
CTK1YKL139W RAD28Q12021 506 aa2.43□□□□□ -2.02
CTK1YKL139W ATP20Q12233 115 aa2.43□□□□□ -2.02
CTK1YKL139W STP22P25604 385 aa2.42□□□□□ -2.02
CTK1YKL139W SRP102P36057 244 aaPredicted RBP2.42□□□□□ -2.02
CTK1YKL139W KNH1P50112 268 aa2.42□□□□□ -2.02
CTK1YKL139W YOR214CQ12282 236 aa2.42□□□□□ -2.02
CTK1YKL139W RPL2AP0CX45 254 aaKnown RBP2.41□□□□□ -2.02
CTK1YKL139W RPL2BP0CX46 254 aaKnown RBP2.41□□□□□ -2.02
CTK1YKL139W ORM1P53224 222 aa2.41□□□□□ -2.02
CTK1YKL139W TIM13P53299 105 aa2.41□□□□□ -2.02
CTK1YKL139W POP3P53833 195 aaPredicted RBP2.41□□□□□ -2.02
CTK1YKL139W YNL033WP53964 284 aa2.41□□□□□ -2.02
CTK1YKL139W LSM3P57743 89 aaKnown RBP2.41□□□□□ -2.02
CTK1YKL139W PET54P10834 293 aa2.4□□□□□ -2.02
CTK1YKL139W MDH2P22133 377 aa2.4□□□□□ -2.02
CTK1YKL139W PEX34P25584 144 aa2.4□□□□□ -2.02
CTK1YKL139W TFC1P32367 649 aa2.4□□□□□ -2.02
CTK1YKL139W VPS28Q02767 242 aa2.4□□□□□ -2.02
CTK1YKL139W YDC1Q02896 317 aa2.4□□□□□ -2.02
CTK1YKL139W YLR046CQ12253 270 aa2.4□□□□□ -2.02
CTK1YKL139W SEC11P15367 167 aa2.4□□□□□ -2.03
CTK1YKL139W PHO85P17157 305 aa2.4□□□□□ -2.03
CTK1YKL139W NUF2P33895 451 aa2.4□□□□□ -2.03
CTK1YKL139W YBR220CP38318 560 aa2.4□□□□□ -2.03
CTK1YKL139W YKR005CQ02203 525 aa2.4□□□□□ -2.03
CTK1YKL139W BOL1Q3E793 110 aa2.4□□□□□ -2.03
CTK1YKL139W PBI2P0CT04 75 aaKnown RBP2.39□□□□□ -2.03
CTK1YKL139W HSP30P25619 332 aa2.39□□□□□ -2.03
CTK1YKL139W RRT1P38192 103 aa2.39□□□□□ -2.03
CTK1YKL139W YPL073CP40323 161 aa2.39□□□□□ -2.03
CTK1YKL139W PEP8P40335 379 aa2.39□□□□□ -2.03
CTK1YKL139W AYR1P40471 297 aa2.39□□□□□ -2.03
CTK1YKL139W APQ12P40532 138 aa2.39□□□□□ -2.03
CTK1YKL139W LSM1P47017 172 aaKnown RBP2.39□□□□□ -2.03
CTK1YKL139W RNH202Q05635 350 aa2.39□□□□□ -2.03
CTK1YKL139W UBC8P28263 218 aa2.38□□□□□ -2.03
CTK1YKL139W BUD25P85052 153 aa2.38□□□□□ -2.03
CTK1YKL139W ANT1Q06497 328 aa2.38□□□□□ -2.03
CTK1YKL139W RPL30P14120 105 aaKnown RBP2.37□□□□□ -2.03
CTK1YKL139W GLR1P41921 483 aaKnown RBP2.37□□□□□ -2.03
CTK1YKL139W MOG1P47123 218 aa2.37□□□□□ -2.03
CTK1YKL139W RRP17Q04031 235 aaPredicted RBP2.37□□□□□ -2.03
CTK1YKL139W YPR013CQ12145 317 aa2.37□□□□□ -2.03
CTK1YKL139W FLO9P39712 1322 aa2.37□□□□□ -2.03
CTK1YKL139W YKR045CP36138 183 aa2.36□□□□□ -2.03
CTK1YKL139W DLS1P40366 167 aa2.36□□□□□ -2.03
CTK1YKL139W HHT1P61830 136 aa2.36□□□□□ -2.03
CTK1YKL139W YPR174CQ06616 221 aaPredicted RBP2.36□□□□□ -2.03
CTK1YKL139W RAD6P06104 172 aa2.36□□□□□ -2.03
CTK1YKL139W ATP5P09457 212 aa2.36□□□□□ -2.03
CTK1YKL139W PTC1P35182 281 aa2.35□□□□□ -2.03
CTK1YKL139W YAP3P38749 330 aa2.35□□□□□ -2.03
CTK1YKL139W YEL028WP39989 153 aa2.35□□□□□ -2.03
CTK1YKL139W SYM1Q06563 197 aa2.35□□□□□ -2.03
CTK1YKL139W PRP11Q07350 266 aaPredicted RBP2.35□□□□□ -2.03
CTK1YKL139W TRM3Q07527 1436 aa2.35□□□□□ -2.03
CTK1YKL139W MSB2P32334 1306 aa2.34□□□□□ -2.03
CTK1YKL139W TMA19P35691 167 aaKnown RBP2.34□□□□□ -2.03
CTK1YKL139W SFK1P35735 353 aa2.34□□□□□ -2.03
CTK1YKL139W YHL018WP38744 120 aaPredicted RBP2.34□□□□□ -2.03
CTK1YKL139W RIO2P40160 425 aaKnown RBP2.34□□□□□ -2.03
CTK1YKL139W SOK1P40317 901 aa2.34□□□□□ -2.03
CTK1YKL139W FIP1P45976 327 aa2.34□□□□□ -2.03
CTK1YKL139W PKR1Q03880 122 aaKnown RBP2.34□□□□□ -2.03
CTK1YKL139W YOR1P53049 1477 aa2.34□□□□□ -2.04
CTK1YKL139W YBR219CP38317 127 aa2.33□□□□□ -2.04
CTK1YKL139W IPI1P38803 334 aaPredicted RBP2.33□□□□□ -2.04
CTK1YKL139W YER135CP40082 130 aa2.33□□□□□ -2.04
CTK1YKL139W PIR1Q03178 341 aa2.33□□□□□ -2.04
CTK1YKL139W PST2Q12335 198 aaKnown RBP2.33□□□□□ -2.04
CTK1YKL139W COX8P04039 78 aa2.32□□□□□ -2.04
CTK1YKL139W ACP1P32463 125 aa2.32□□□□□ -2.04
CTK1YKL139W GSP2P32836 220 aaKnown RBP2.32□□□□□ -2.04
CTK1YKL139W THG1P53215 237 aaKnown RBP2.32□□□□□ -2.04
CTK1YKL139W DAD4P69851 72 aa2.32□□□□□ -2.04
CTK1YKL139W RAV2Q03956 351 aa2.32□□□□□ -2.04
CTK1YKL139W RIM9Q04734 239 aa2.32□□□□□ -2.04
CTK1YKL139W YOR015WQ12169 119 aa2.32□□□□□ -2.04
CTK1YKL139W YOR381W-AQ3E804 55 aa2.32□□□□□ -2.04
CTK1YKL139W YJR015WP47090 510 aa2.32□□□□□ -2.04
CTK1YKL139W FIT2Q08906 153 aa2.32□□□□□ -2.04
CTK1YKL139W YPR117WQ06116 2489 aa2.31□□□□□ -2.04
CTK1YKL139W HTD2P38790 280 aaKnown RBP2.31□□□□□ -2.04
CTK1YKL139W YEL073CP39974 107 aa2.31□□□□□ -2.04
CTK1YKL139W CCC1P47818 322 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms