RNA–Protein interactions for RNA: YJR063W

RPA12, Transcript of RNA polymerase I subunit A12.2, yeastyeast

Gene RPA12, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA12YJR063W SHH3Q04487 196 aa1.88□□□□□ -2.11
RPA12YJR063W FLO9P39712 1322 aa1.88□□□□□ -2.11
RPA12YJR063W FAS1P07149 2051 aaKnown RBP1.87□□□□□ -2.11
RPA12YJR063W DUR1,2P32528 1835 aaKnown RBP1.87□□□□□ -2.11
RPA12YJR063W UBI4P0CG63 381 aaKnown RBP1.87□□□□□ -2.11
RPA12YJR063W RPL2AP0CX45 254 aaKnown RBP1.87□□□□□ -2.11
RPA12YJR063W RPL2BP0CX46 254 aaKnown RBP1.87□□□□□ -2.11
RPA12YJR063W YBR209WP38311 105 aa1.87□□□□□ -2.11
RPA12YJR063W DSE2P38844 325 aa1.87□□□□□ -2.11
RPA12YJR063W KNH1P50112 268 aa1.87□□□□□ -2.11
RPA12YJR063W ORM1P53224 222 aa1.87□□□□□ -2.11
RPA12YJR063W YLR422WQ06409 1932 aa1.87□□□□□ -2.11
RPA12YJR063W IDP1P21954 428 aaKnown RBP1.86□□□□□ -2.11
RPA12YJR063W PEX34P25584 144 aa1.86□□□□□ -2.11
RPA12YJR063W FYV4P38783 130 aaPredicted RBP1.86□□□□□ -2.11
RPA12YJR063W NSA2P40078 261 aaKnown RBP1.86□□□□□ -2.11
RPA12YJR063W YPL073CP40323 161 aa1.86□□□□□ -2.11
RPA12YJR063W NQM1P53228 333 aaPredicted RBP1.86□□□□□ -2.11
RPA12YJR063W SAY1P53324 424 aa1.86□□□□□ -2.11
RPA12YJR063W YNL033WP53964 284 aa1.86□□□□□ -2.11
RPA12YJR063W CUE4Q04201 117 aaPredicted RBP1.86□□□□□ -2.11
RPA12YJR063W ATP20Q12233 115 aa1.86□□□□□ -2.11
RPA12YJR063W YOR214CQ12282 236 aa1.86□□□□□ -2.11
RPA12YJR063W PET54P10834 293 aa1.85□□□□□ -2.11
RPA12YJR063W YKR045CP36138 183 aa1.85□□□□□ -2.11
RPA12YJR063W YBR220CP38318 560 aa1.85□□□□□ -2.11
RPA12YJR063W TIM13P53299 105 aa1.85□□□□□ -2.11
RPA12YJR063W LSM3P57743 89 aaKnown RBP1.85□□□□□ -2.11
RPA12YJR063W VPS28Q02767 242 aa1.85□□□□□ -2.11
RPA12YJR063W RNH202Q05635 350 aa1.85□□□□□ -2.11
RPA12YJR063W YLR046CQ12253 270 aa1.85□□□□□ -2.11
RPA12YJR063W MSB2P32334 1306 aa1.85□□□□□ -2.11
RPA12YJR063W SEC11P15367 167 aa1.84□□□□□ -2.11
RPA12YJR063W MDH2P22133 377 aa1.84□□□□□ -2.11
RPA12YJR063W YNL200CP40165 246 aaKnown RBP1.84□□□□□ -2.11
RPA12YJR063W POP3P53833 195 aaPredicted RBP1.84□□□□□ -2.11
RPA12YJR063W YDC1Q02896 317 aa1.84□□□□□ -2.11
RPA12YJR063W YPR013CQ12145 317 aa1.84□□□□□ -2.11
RPA12YJR063W EFG1Q3E705 233 aaKnown RBP1.84□□□□□ -2.11
RPA12YJR063W RPL30P14120 105 aaKnown RBP1.83□□□□□ -2.12
RPA12YJR063W SFK1P35735 353 aa1.83□□□□□ -2.12
RPA12YJR063W SRP102P36057 244 aaPredicted RBP1.83□□□□□ -2.12
RPA12YJR063W RRT1P38192 103 aa1.83□□□□□ -2.12
RPA12YJR063W PEP8P40335 379 aa1.83□□□□□ -2.12
RPA12YJR063W AYR1P40471 297 aa1.83□□□□□ -2.12
RPA12YJR063W XPT1P47165 209 aa1.83□□□□□ -2.12
RPA12YJR063W YKR005CQ02203 525 aa1.83□□□□□ -2.12
RPA12YJR063W YPR174CQ06616 221 aaPredicted RBP1.83□□□□□ -2.12
RPA12YJR063W HSP30P25619 332 aa1.82□□□□□ -2.12
RPA12YJR063W TFC1P32367 649 aa1.82□□□□□ -2.12
RPA12YJR063W PTC1P35182 281 aa1.82□□□□□ -2.12
RPA12YJR063W YBR219CP38317 127 aa1.82□□□□□ -2.12
RPA12YJR063W YEL028WP39989 153 aa1.82□□□□□ -2.12
RPA12YJR063W APQ12P40532 138 aa1.82□□□□□ -2.12
RPA12YJR063W GLR1P41921 483 aaKnown RBP1.82□□□□□ -2.12
RPA12YJR063W ANT1Q06497 328 aa1.82□□□□□ -2.12
RPA12YJR063W PST2Q12335 198 aaKnown RBP1.82□□□□□ -2.12
RPA12YJR063W BOL1Q3E793 110 aa1.82□□□□□ -2.12
RPA12YJR063W YOR1P53049 1477 aa1.82□□□□□ -2.12
RPA12YJR063W PHO85P17157 305 aa1.81□□□□□ -2.12
RPA12YJR063W UBC8P28263 218 aa1.81□□□□□ -2.12
RPA12YJR063W YHL018WP38744 120 aaPredicted RBP1.81□□□□□ -2.12
RPA12YJR063W YER135CP40082 130 aa1.81□□□□□ -2.12
RPA12YJR063W RIO2P40160 425 aaKnown RBP1.81□□□□□ -2.12
RPA12YJR063W YGL193CP53097 103 aa1.81□□□□□ -2.12
RPA12YJR063W HHT1P61830 136 aa1.81□□□□□ -2.12
RPA12YJR063W BUD25P85052 153 aa1.81□□□□□ -2.12
RPA12YJR063W PRP11Q07350 266 aaPredicted RBP1.81□□□□□ -2.12
RPA12YJR063W TRM3Q07527 1436 aa1.81□□□□□ -2.12
RPA12YJR063W COX8P04039 78 aa1.8□□□□□ -2.12
RPA12YJR063W RAD6P06104 172 aa1.8□□□□□ -2.12
RPA12YJR063W ATP5P09457 212 aa1.8□□□□□ -2.12
RPA12YJR063W PBI2P0CT04 75 aaKnown RBP1.8□□□□□ -2.12
RPA12YJR063W YAP3P38749 330 aa1.8□□□□□ -2.12
RPA12YJR063W FIP1P45976 327 aa1.8□□□□□ -2.12
RPA12YJR063W LSM1P47017 172 aaKnown RBP1.8□□□□□ -2.12
RPA12YJR063W YJR015WP47090 510 aa1.8□□□□□ -2.12
RPA12YJR063W IGO1P53897 168 aa1.8□□□□□ -2.12
RPA12YJR063W PIR1Q03178 341 aa1.8□□□□□ -2.12
RPA12YJR063W RRP17Q04031 235 aaPredicted RBP1.8□□□□□ -2.12
RPA12YJR063W RIM9Q04734 239 aa1.8□□□□□ -2.12
RPA12YJR063W FIT2Q08906 153 aa1.8□□□□□ -2.12
RPA12YJR063W NUF2P33895 451 aa1.79□□□□□ -2.12
RPA12YJR063W SOK1P40317 901 aa1.79□□□□□ -2.12
RPA12YJR063W SYM1Q06563 197 aa1.79□□□□□ -2.12
RPA12YJR063W CSI2Q08054 341 aa1.79□□□□□ -2.12
RPA12YJR063W GSP2P32836 220 aaKnown RBP1.78□□□□□ -2.12
RPA12YJR063W TMA19P35691 167 aaKnown RBP1.78□□□□□ -2.12
RPA12YJR063W DLS1P40366 167 aa1.78□□□□□ -2.12
RPA12YJR063W CCC1P47818 322 aa1.78□□□□□ -2.12
RPA12YJR063W HTD2P38790 280 aaKnown RBP1.77□□□□□ -2.13
RPA12YJR063W IPI1P38803 334 aaPredicted RBP1.77□□□□□ -2.13
RPA12YJR063W MOG1P47123 218 aa1.77□□□□□ -2.13
RPA12YJR063W THG1P53215 237 aaKnown RBP1.77□□□□□ -2.13
RPA12YJR063W YLR162WQ06235 118 aa1.77□□□□□ -2.13
RPA12YJR063W CYR1P08678 2026 aaKnown RBP1.77□□□□□ -2.13
RPA12YJR063W QCR8P08525 94 aa1.76□□□□□ -2.13
RPA12YJR063W YJL218WP40892 196 aaKnown RBP1.76□□□□□ -2.13
RPA12YJR063W DAD4P69851 72 aa1.76□□□□□ -2.13
RPA12YJR063W RAV2Q03956 351 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms