RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	GRE1	Q08969	168 aa		0.86	□□□□□ -2.27
REF2	YDR195W	YOR342C	Q12182	319 aa		0.86	□□□□□ -2.27
REF2	YDR195W	ATP20	Q12233	115 aa		0.86	□□□□□ -2.27
REF2	YDR195W	YLR412C-A	Q3E742	68 aa		0.86	□□□□□ -2.27
REF2	YDR195W	YPR014C	Q6B0W2	109 aa		0.86	□□□□□ -2.27
REF2	YDR195W	RPS24A	P0CX31	135 aa	Known RBP	0.86	□□□□□ -2.27
REF2	YDR195W	RPS24B	P0CX32	135 aa	Known RBP	0.86	□□□□□ -2.27
REF2	YDR195W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
REF2	YDR195W	ARO7	P32178	256 aa		0.86	□□□□□ -2.27
REF2	YDR195W	CLG1	P35190	452 aa		0.86	□□□□□ -2.27
REF2	YDR195W	SHH4	Q06236	168 aa		0.86	□□□□□ -2.27
REF2	YDR195W	YET3	Q07451	203 aa		0.86	□□□□□ -2.27
REF2	YDR195W	DAS2	Q12084	232 aa		0.86	□□□□□ -2.27
REF2	YDR195W	ACC1	Q00955	2233 aa	Known RBP	0.85	□□□□□ -2.27
REF2	YDR195W	YHR212W-A	P0CX91	67 aa		0.85	□□□□□ -2.27
REF2	YDR195W	GSP2	P32836	220 aa	Known RBP	0.85	□□□□□ -2.27
REF2	YDR195W	YKL102C	P34249	101 aa		0.85	□□□□□ -2.27
REF2	YDR195W	NSA2	P40078	261 aa	Known RBP	0.85	□□□□□ -2.27
REF2	YDR195W	POG1	P40473	351 aa		0.85	□□□□□ -2.27
REF2	YDR195W	ALB1	P47019	175 aa	Predicted RBP	0.85	□□□□□ -2.27
REF2	YDR195W	GPI17	Q04080	534 aa		0.85	□□□□□ -2.27
REF2	YDR195W	PST2	Q12335	198 aa	Known RBP	0.85	□□□□□ -2.27
REF2	YDR195W	DGK1	Q12382	290 aa		0.85	□□□□□ -2.27
REF2	YDR195W	YCL042W	P25572	119 aa		0.84	□□□□□ -2.28
REF2	YDR195W	RRT1	P38192	103 aa		0.84	□□□□□ -2.28
REF2	YDR195W	NVJ1	P38881	321 aa		0.84	□□□□□ -2.28
REF2	YDR195W	SEC72	P39742	193 aa	Known RBP	0.84	□□□□□ -2.28
REF2	YDR195W	SBH1	P52870	82 aa		0.84	□□□□□ -2.28
REF2	YDR195W	JAC1	P53193	184 aa		0.84	□□□□□ -2.28
REF2	YDR195W	UPS3	Q04006	179 aa		0.84	□□□□□ -2.28
REF2	YDR195W	ATG38	Q05789	226 aa	Known RBP	0.84	□□□□□ -2.28
REF2	YDR195W	SLH1	P53327	1967 aa	Known RBP	0.84	□□□□□ -2.28
REF2	YDR195W	YCR023C	P25351	611 aa		0.83	□□□□□ -2.28
REF2	YDR195W	CPR5	P35176	225 aa		0.83	□□□□□ -2.28
REF2	YDR195W	YNL200C	P40165	246 aa	Known RBP	0.83	□□□□□ -2.28
REF2	YDR195W	GAL83	Q04739	417 aa		0.83	□□□□□ -2.28
REF2	YDR195W	YOR015W	Q12169	119 aa		0.83	□□□□□ -2.28
REF2	YDR195W	COA3	Q3E7B2	85 aa		0.83	□□□□□ -2.28
REF2	YDR195W	STP22	P25604	385 aa		0.82	□□□□□ -2.28
REF2	YDR195W	MAK5	P38112	773 aa	Predicted RBP	0.82	□□□□□ -2.28
REF2	YDR195W	FYV4	P38783	130 aa	Predicted RBP	0.82	□□□□□ -2.28
REF2	YDR195W	RFC2	P40348	353 aa		0.82	□□□□□ -2.28
REF2	YDR195W	MPM1	P40364	252 aa		0.82	□□□□□ -2.28
REF2	YDR195W	SOL1	P50278	321 aa		0.82	□□□□□ -2.28
REF2	YDR195W	YIP3	P53633	176 aa		0.82	□□□□□ -2.28
REF2	YDR195W	YLR460C	P54007	376 aa		0.82	□□□□□ -2.28
REF2	YDR195W	PIR1	Q03178	341 aa		0.82	□□□□□ -2.28
REF2	YDR195W	RRP17	Q04031	235 aa	Predicted RBP	0.82	□□□□□ -2.28
REF2	YDR195W	HPT1	Q04178	221 aa	Known RBP	0.82	□□□□□ -2.28
REF2	YDR195W	SEC14	P24280	304 aa	Known RBP	0.82	□□□□□ -2.28
REF2	YDR195W	TRR1	P29509	319 aa	Known RBP	0.82	□□□□□ -2.28
REF2	YDR195W	YGL235W	P53071	178 aa		0.82	□□□□□ -2.28
REF2	YDR195W	YHP1	Q04116	353 aa		0.82	□□□□□ -2.28
REF2	YDR195W	UPS1	Q05776	175 aa		0.82	□□□□□ -2.28
REF2	YDR195W	SEN2	P16658	377 aa		0.81	□□□□□ -2.28
REF2	YDR195W	EGD2	P38879	174 aa	Known RBP	0.81	□□□□□ -2.28
REF2	YDR195W	TTI2	P47168	421 aa		0.81	□□□□□ -2.28
REF2	YDR195W	DML1	Q03652	475 aa		0.81	□□□□□ -2.28
REF2	YDR195W	YOR381W-A	Q3E804	55 aa		0.81	□□□□□ -2.28
REF2	YDR195W	STF2	P16965	84 aa		0.8	□□□□□ -2.28
REF2	YDR195W	HSP30	P25619	332 aa		0.8	□□□□□ -2.28
REF2	YDR195W	NSE4	P43124	402 aa		0.8	□□□□□ -2.28
REF2	YDR195W	MET31	Q03081	177 aa		0.8	□□□□□ -2.28
REF2	YDR195W	YDR391C	Q04170	232 aa		0.8	□□□□□ -2.28
REF2	YDR195W	ATG41	Q12048	136 aa		0.8	□□□□□ -2.28
REF2	YDR195W	YOR214C	Q12282	236 aa		0.8	□□□□□ -2.28
REF2	YDR195W	TAR1	Q8TGM6	124 aa		0.8	□□□□□ -2.28
REF2	YDR195W	RPL35A	P0CX84	120 aa	Known RBP	0.79	□□□□□ -2.28
REF2	YDR195W	RPL35B	P0CX85	120 aa	Known RBP	0.79	□□□□□ -2.28
REF2	YDR195W	MAK31	P23059	88 aa		0.79	□□□□□ -2.28
REF2	YDR195W	RAD51	P25454	400 aa		0.79	□□□□□ -2.28
REF2	YDR195W	YBL010C	P32788	280 aa		0.79	□□□□□ -2.28
REF2	YDR195W	ETR1	P38071	380 aa		0.79	□□□□□ -2.28
REF2	YDR195W	YBR242W	P38331	238 aa		0.79	□□□□□ -2.28
REF2	YDR195W	SRP14	P38985	146 aa		0.79	□□□□□ -2.28
REF2	YDR195W	RIM9	Q04734	239 aa		0.79	□□□□□ -2.28
REF2	YDR195W	ELP6	Q04868	273 aa		0.79	□□□□□ -2.28
REF2	YDR195W	YPR127W	Q06494	345 aa		0.79	□□□□□ -2.28
REF2	YDR195W	PEX11	Q12462	236 aa		0.79	□□□□□ -2.28
REF2	YDR195W	MRPL15	P36523	253 aa		0.78	□□□□□ -2.28
REF2	YDR195W	CCS1	P40202	249 aa	Known RBP	0.78	□□□□□ -2.28
REF2	YDR195W	YNL140C	P53910	189 aa		0.78	□□□□□ -2.28
REF2	YDR195W	YKR005C	Q02203	525 aa		0.78	□□□□□ -2.28
REF2	YDR195W	VPS28	Q02767	242 aa		0.78	□□□□□ -2.28
REF2	YDR195W	YPR203W	Q08994	102 aa		0.78	□□□□□ -2.28
REF2	YDR195W	YLR050C	Q12155	161 aa	Known RBP	0.78	□□□□□ -2.28
REF2	YDR195W	UBC8	P28263	218 aa		0.78	□□□□□ -2.29
REF2	YDR195W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.29	not detected
REF2	YDR195W	CSH1	P38287	376 aa		0.78	□□□□□ -2.29
REF2	YDR195W	GRX5	Q02784	150 aa		0.78	□□□□□ -2.29
REF2	YDR195W	YMR030W-A	Q3E760	96 aa		0.78	□□□□□ -2.29
REF2	YDR195W	CHD1	P32657	1468 aa		0.77	□□□□□ -2.29
REF2	YDR195W	XPT1	P47165	209 aa		0.77	□□□□□ -2.29
REF2	YDR195W	TIM13	P53299	105 aa		0.77	□□□□□ -2.29
REF2	YDR195W	HSK3	P69852	69 aa		0.77	□□□□□ -2.29
REF2	YDR195W	PLP1	Q04004	230 aa		0.77	□□□□□ -2.29
REF2	YDR195W	GIM5	Q04493	163 aa		0.77	□□□□□ -2.29
REF2	YDR195W	LCL2	Q08045	131 aa		0.77	□□□□□ -2.29
REF2	YDR195W	YHL037C	P38733	133 aa		0.76	□□□□□ -2.29
REF2	YDR195W	YEL073C	P39974	107 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms