RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C MCH1Q07376 486 aa4.9□□□□□ -1.63
MDH3YDL078C RRS1Q08746 203 aaKnown RBP4.9□□□□□ -1.63
MDH3YDL078C RKI1Q12189 258 aa4.9□□□□□ -1.63
MDH3YDL078C RDL1Q12305 139 aaKnown RBP4.9□□□□□ -1.63
MDH3YDL078C PRR2Q12310 699 aa4.9□□□□□ -1.63
MDH3YDL078C YLR118CQ12354 227 aa4.9□□□□□ -1.63
MDH3YDL078C GEP5Q12393 293 aa4.9□□□□□ -1.63
MDH3YDL078C RPL11BQ3E757 174 aaPredicted RBP4.9□□□□□ -1.63
MDH3YDL078C TDH3P00359 332 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
MDH3YDL078C SEC22P22214 214 aa4.89□□□□□ -1.63
MDH3YDL078C PCL1P24867 279 aa4.89□□□□□ -1.63
MDH3YDL078C ELO2P25358 347 aa4.89□□□□□ -1.63
MDH3YDL078C POP5P28005 173 aa4.89□□□□□ -1.63
MDH3YDL078C GLC7P32598 312 aaKnown RBP4.89□□□□□ -1.63
MDH3YDL078C UTR5P32630 166 aa4.89□□□□□ -1.63
MDH3YDL078C DAD2P36162 133 aa4.89□□□□□ -1.63
MDH3YDL078C LSM2P38203 95 aaKnown RBP4.89□□□□□ -1.63
MDH3YDL078C PAC2P39937 518 aa4.89□□□□□ -1.63
MDH3YDL078C YEA6P39953 335 aa4.89□□□□□ -1.63
MDH3YDL078C YER121WP40076 114 aa4.89□□□□□ -1.63
MDH3YDL078C YER188WP40103 239 aa4.89□□□□□ -1.63
MDH3YDL078C MRPL35Q06678 367 aa4.89□□□□□ -1.63
MDH3YDL078C NAT5Q08689 176 aa4.89□□□□□ -1.63
MDH3YDL078C YCT1Q12235 531 aa4.89□□□□□ -1.63
MDH3YDL078C YOL114CQ12322 202 aa4.89□□□□□ -1.63
MDH3YDL078C FRE6Q12473 712 aa4.89□□□□□ -1.63
MDH3YDL078C AIM45Q12480 344 aaKnown RBP4.89□□□□□ -1.63
MDH3YDL078C YCR075W-AQ3E830 75 aa4.89□□□□□ -1.63
MDH3YDL078C URA2P07259 2214 aaKnown RBP4.89□□□□□ -1.63
MDH3YDL078C QCR7P00128 127 aa4.88□□□□□ -1.63
MDH3YDL078C TDH2P00358 332 aaKnown RBP4.88□□□□□ -1.63
MDH3YDL078C SEC4P07560 215 aaKnown RBP4.88□□□□□ -1.63
MDH3YDL078C RPS25BP0C0T4 108 aaKnown RBP4.88□□□□□ -1.63
MDH3YDL078C YER190C-BP0CX94 160 aa4.88□□□□□ -1.63
MDH3YDL078C YEL077W-AP0CX95 160 aa4.88□□□□□ -1.63
MDH3YDL078C YGR296C-BP0CX96 160 aa4.88□□□□□ -1.63
MDH3YDL078C YPL283W-BP0CX97 160 aa4.88□□□□□ -1.63
MDH3YDL078C YPR204C-AP0CX98 160 aa4.88□□□□□ -1.63
MDH3YDL078C NTF2P33331 125 aaKnown RBP4.88□□□□□ -1.63
MDH3YDL078C FRM2P37261 193 aa4.88□□□□□ -1.63
MDH3YDL078C DOG2P38773 246 aa4.88□□□□□ -1.63
MDH3YDL078C HTD2P38790 280 aaKnown RBP4.88□□□□□ -1.63
MDH3YDL078C ATF1P40353 525 aa4.88□□□□□ -1.63
MDH3YDL078C EGT2P42835 1041 aa4.88□□□□□ -1.63
MDH3YDL078C RPA43P46669 326 aa4.88□□□□□ -1.63
MDH3YDL078C YJL163CP46996 555 aa4.88□□□□□ -1.63
MDH3YDL078C RIB4P50861 169 aaPredicted RBP4.88□□□□□ -1.63
MDH3YDL078C YIF1P53845 314 aaKnown RBP4.88□□□□□ -1.63
MDH3YDL078C APJ1P53940 528 aa4.88□□□□□ -1.63
MDH3YDL078C YNL046WP53956 172 aa4.88□□□□□ -1.63
MDH3YDL078C GAT3Q07928 141 aa4.88□□□□□ -1.63
MDH3YDL078C CSI2Q08054 341 aa4.88□□□□□ -1.63
MDH3YDL078C FRE8Q12209 686 aa4.88□□□□□ -1.63
MDH3YDL078C RPS25AQ3E792 108 aaPredicted RBP4.88□□□□□ -1.63
MDH3YDL078C MES1P00958 751 aaKnown RBP4.87□□□□□ -1.63
MDH3YDL078C SAG1P20840 650 aa4.87□□□□□ -1.63
MDH3YDL078C OCH1P31755 480 aa4.87□□□□□ -1.63
MDH3YDL078C MRP49P32388 137 aa4.87□□□□□ -1.63
MDH3YDL078C MRPS9P38120 278 aa4.87□□□□□ -1.63
MDH3YDL078C DER1P38307 211 aa4.87□□□□□ -1.63
MDH3YDL078C CTK2P46962 323 aa4.87□□□□□ -1.63
MDH3YDL078C YNR048WP53740 393 aa4.87□□□□□ -1.63
MDH3YDL078C HHT1P61830 136 aa4.87□□□□□ -1.63
MDH3YDL078C MSS11Q03825 758 aa4.87□□□□□ -1.63
MDH3YDL078C LOA1Q06508 300 aa4.87□□□□□ -1.63
MDH3YDL078C USB1Q12208 290 aaKnown RBP4.87□□□□□ -1.63
MDH3YDL078C YPR071WQ12346 211 aa4.87□□□□□ -1.63
MDH3YDL078C SOD2P00447 233 aa4.86□□□□□ -1.63
MDH3YDL078C BGL2P15703 313 aaKnown RBP4.86□□□□□ -1.63
MDH3YDL078C PUB1P32588 453 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
MDH3YDL078C THI2P38141 450 aa4.86□□□□□ -1.63
MDH3YDL078C MIX23P38162 196 aa4.86□□□□□ -1.63
MDH3YDL078C DLS1P40366 167 aa4.86□□□□□ -1.63
MDH3YDL078C YIR020CP40575 100 aa4.86□□□□□ -1.63
MDH3YDL078C YFL054CP43549 646 aa4.86□□□□□ -1.63
MDH3YDL078C NCA3P46955 337 aa4.86□□□□□ -1.63
MDH3YDL078C PAU12P53343 120 aa4.86□□□□□ -1.63
MDH3YDL078C YLR152CP54072 576 aa4.86□□□□□ -1.63
MDH3YDL078C YDR415CQ04033 374 aaPredicted RBP4.86□□□□□ -1.63
MDH3YDL078C SCW10Q04951 389 aa4.86□□□□□ -1.63
MDH3YDL078C CTR3Q06686 241 aa4.86□□□□□ -1.63
MDH3YDL078C YPR053CQ6Q5F3 151 aa4.86□□□□□ -1.63
MDH3YDL078C COX9P07255 59 aa4.85□□□□□ -1.63
MDH3YDL078C MSI1P13712 422 aa4.85□□□□□ -1.63
MDH3YDL078C RPL30P14120 105 aaKnown RBP4.85□□□□□ -1.63
MDH3YDL078C UGX2P32772 223 aa4.85□□□□□ -1.63
MDH3YDL078C ARC40P38328 384 aaKnown RBP4.85□□□□□ -1.63
MDH3YDL078C NSA2P40078 261 aaKnown RBP4.85□□□□□ -1.63
MDH3YDL078C OST1P41543 476 aaKnown RBP4.85□□□□□ -1.63
MDH3YDL078C NIF3P53081 288 aa4.85□□□□□ -1.63
MDH3YDL078C SMM1P53720 384 aaKnown RBP4.85□□□□□ -1.63
MDH3YDL078C YPR098CQ06089 161 aa4.85□□□□□ -1.63
MDH3YDL078C ATG41Q12048 136 aa4.85□□□□□ -1.63
MDH3YDL078C YCR007CP25354 239 aa4.84□□□□□ -1.63
MDH3YDL078C REC114P32841 428 aa4.84□□□□□ -1.63
MDH3YDL078C PHD1P36093 366 aa4.84□□□□□ -1.63
MDH3YDL078C DOG1P38774 246 aa4.84□□□□□ -1.63
MDH3YDL078C SPC25P40014 221 aa4.84□□□□□ -1.63
MDH3YDL078C SGN1P40561 250 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
MDH3YDL078C PAU5P43575 122 aa4.84□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms