RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W ATP20Q12233 115 aa1.48□□□□□ -2.17
UBC9YDL064W DGK1Q12382 290 aa1.48□□□□□ -2.17
UBC9YDL064W MPD1Q12404 318 aaKnown RBP1.48□□□□□ -2.17
UBC9YDL064W YPR014CQ6B0W2 109 aa1.48□□□□□ -2.17
UBC9YDL064W VAR1P02381 398 aa1.47□□□□□ -2.17
UBC9YDL064W YCL042WP25572 119 aa1.47□□□□□ -2.17
UBC9YDL064W SEC72P39742 193 aaKnown RBP1.47□□□□□ -2.17
UBC9YDL064W HPA3P39979 161 aa1.47□□□□□ -2.17
UBC9YDL064W EDC3P39998 551 aaKnown RBP1.47□□□□□ -2.17
UBC9YDL064W FMP32P43557 207 aa1.47□□□□□ -2.17
UBC9YDL064W YIP3P53633 176 aa1.47□□□□□ -2.17
UBC9YDL064W GPI17Q04080 534 aa1.47□□□□□ -2.17
UBC9YDL064W GAL83Q04739 417 aa1.47□□□□□ -2.17
UBC9YDL064W YHR212W-AP0CX91 67 aa1.46□□□□□ -2.18
UBC9YDL064W NVJ1P38881 321 aa1.46□□□□□ -2.18
UBC9YDL064W NSA2P40078 261 aaKnown RBP1.46□□□□□ -2.18
UBC9YDL064W YLR412C-AQ3E742 68 aa1.46□□□□□ -2.18
UBC9YDL064W STP22P25604 385 aa1.45□□□□□ -2.18
UBC9YDL064W ARO7P32178 256 aa1.45□□□□□ -2.18
UBC9YDL064W GSP2P32836 220 aaKnown RBP1.45□□□□□ -2.18
UBC9YDL064W RPB7P34087 171 aa1.45□□□□□ -2.18
UBC9YDL064W SFK1P35735 353 aa1.45□□□□□ -2.18
UBC9YDL064W YET3Q07451 203 aa1.45□□□□□ -2.18
UBC9YDL064W DAS2Q12084 232 aa1.45□□□□□ -2.18
UBC9YDL064W SOK1P40317 901 aa1.44□□□□□ -2.18
UBC9YDL064W JAC1P53193 184 aa1.44□□□□□ -2.18
UBC9YDL064W CHD1P32657 1468 aa1.43□□□□□ -2.18
UBC9YDL064W RRT1P38192 103 aa1.43□□□□□ -2.18
UBC9YDL064W RFC2P40348 353 aa1.43□□□□□ -2.18
UBC9YDL064W YCR023CP25351 611 aa1.42□□□□□ -2.18
UBC9YDL064W TRR1P29509 319 aaKnown RBP1.42□□□□□ -2.18
UBC9YDL064W FYV4P38783 130 aaPredicted RBP1.42□□□□□ -2.18
UBC9YDL064W SRP14P38985 146 aa1.42□□□□□ -2.18
UBC9YDL064W ALB1P47019 175 aaPredicted RBP1.42□□□□□ -2.18
UBC9YDL064W UPS3Q04006 179 aa1.42□□□□□ -2.18
UBC9YDL064W MAK5P38112 773 aaPredicted RBP1.41□□□□□ -2.18
UBC9YDL064W CSH1P38287 376 aa1.41□□□□□ -2.18
UBC9YDL064W EGD2P38879 174 aaKnown RBP1.41□□□□□ -2.18
UBC9YDL064W YNL200CP40165 246 aaKnown RBP1.41□□□□□ -2.18
UBC9YDL064W YGL235WP53071 178 aa1.41□□□□□ -2.18
UBC9YDL064W YLR460CP54007 376 aa1.41□□□□□ -2.18
UBC9YDL064W PIR1Q03178 341 aa1.41□□□□□ -2.18
UBC9YDL064W RRP17Q04031 235 aaPredicted RBP1.41□□□□□ -2.18
UBC9YDL064W PEX11Q12462 236 aa1.41□□□□□ -2.18
UBC9YDL064W COA3Q3E7B2 85 aa1.41□□□□□ -2.18
UBC9YDL064W SEC14P24280 304 aaKnown RBP1.4□□□□□ -2.19
UBC9YDL064W MPM1P40364 252 aa1.4□□□□□ -2.19
UBC9YDL064W HPT1Q04178 221 aaKnown RBP1.4□□□□□ -2.19
UBC9YDL064W UPS1Q05776 175 aa1.4□□□□□ -2.19
UBC9YDL064W YLR422WQ06409 1932 aa1.39□□□□□ -2.19
UBC9YDL064W NSE4P43124 402 aa1.39□□□□□ -2.19
UBC9YDL064W TTI2P47168 421 aa1.39□□□□□ -2.19
UBC9YDL064W MET31Q03081 177 aa1.39□□□□□ -2.19
UBC9YDL064W ACC1Q00955 2233 aaKnown RBP1.38□□□□□ -2.19
UBC9YDL064W RPL35AP0CX84 120 aaKnown RBP1.38□□□□□ -2.19
UBC9YDL064W RPL35BP0CX85 120 aaKnown RBP1.38□□□□□ -2.19
UBC9YDL064W SEN2P16658 377 aa1.38□□□□□ -2.19
UBC9YDL064W STF2P16965 84 aa1.38□□□□□ -2.19
UBC9YDL064W RPL37AP49166 88 aaKnown RBP1.38□□□□□ -2.19
UBC9YDL064W RIM9Q04734 239 aa1.38□□□□□ -2.19
UBC9YDL064W ELP6Q04868 273 aa1.38□□□□□ -2.19
UBC9YDL064W YOR015WQ12169 119 aa1.38□□□□□ -2.19
UBC9YDL064W TAR1Q8TGM6 124 aa1.38□□□□□ -2.19
UBC9YDL064W RAD51P25454 400 aa1.37□□□□□ -2.19
UBC9YDL064W HUA1P40325 198 aa1.37□□□□□ -2.19
UBC9YDL064W YNL140CP53910 189 aa1.37□□□□□ -2.19
UBC9YDL064W YHP1Q04116 353 aa1.37□□□□□ -2.19
UBC9YDL064W YOR381W-AQ3E804 55 aa1.37□□□□□ -2.19
UBC9YDL064W HSP30P25619 332 aa1.36□□□□□ -2.19
UBC9YDL064W VPS28Q02767 242 aa1.36□□□□□ -2.19
UBC9YDL064W DML1Q03652 475 aa1.36□□□□□ -2.19
UBC9YDL064W ATG41Q12048 136 aa1.36□□□□□ -2.19
UBC9YDL064W YOR214CQ12282 236 aa1.36□□□□□ -2.19
UBC9YDL064W HSK3P69852 69 aa1.35□□□□□ -2.19
UBC9YDL064W YKR005CQ02203 525 aa1.35□□□□□ -2.19
UBC9YDL064W GIM5Q04493 163 aa1.35□□□□□ -2.19
UBC9YDL064W YPR127WQ06494 345 aa1.35□□□□□ -2.19
UBC9YDL064W YLR050CQ12155 161 aaKnown RBP1.35□□□□□ -2.19
UBC9YDL064W YER121WP40076 114 aa1.34□□□□□ -2.19
UBC9YDL064W SAC3P46674 1301 aa1.34□□□□□ -2.2
UBC9YDL064W ETR1P38071 380 aa1.33□□□□□ -2.2
UBC9YDL064W THI74Q04083 370 aa1.33□□□□□ -2.2
UBC9YDL064W YDR391CQ04170 232 aa1.33□□□□□ -2.2
UBC9YDL064W YBL010CP32788 280 aa1.32□□□□□ -2.2
UBC9YDL064W CCS1P40202 249 aaKnown RBP1.32□□□□□ -2.2
UBC9YDL064W TIM13P53299 105 aa1.32□□□□□ -2.2
UBC9YDL064W RAD6P06104 172 aa1.31□□□□□ -2.2
UBC9YDL064W YEL028WP39989 153 aa1.31□□□□□ -2.2
UBC9YDL064W AVO2Q04749 426 aa1.31□□□□□ -2.2
UBC9YDL064W YPR203WQ08994 102 aa1.31□□□□□ -2.2
UBC9YDL064W DUR1,2P32528 1835 aaKnown RBP1.31□□□□□ -2.2
UBC9YDL064W CMD1P06787 147 aaKnown RBP1.3□□□□□ -2.2
UBC9YDL064W MRPL15P36523 253 aa1.3□□□□□ -2.2
UBC9YDL064W YBR242WP38331 238 aa1.3□□□□□ -2.2
UBC9YDL064W YMR007WQ03675 126 aa1.3□□□□□ -2.2
UBC9YDL064W YMR030W-AQ3E760 96 aa1.3□□□□□ -2.2
UBC9YDL064W SLH1P53327 1967 aaKnown RBP1.3□□□□□ -2.2
UBC9YDL064W MAK31P23059 88 aa1.29□□□□□ -2.2
UBC9YDL064W RME1P32338 300 aaKnown RBP1.29□□□□□ -2.2
UBC9YDL064W YHL037CP38733 133 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 81.9 ms