RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 MET16P18408 261 aaPredicted RBP-3.7□□□□□ -3
snR53snR53 BET1P22804 142 aa-3.7□□□□□ -3
snR53snR53 RMD6P39975 231 aa-3.7□□□□□ -3
snR53snR53 YNL033WP53964 284 aa-3.7□□□□□ -3
snR53snR53 APS3P47064 194 aa-3.71□□□□□ -3
snR53snR53 YDL121CQ07541 149 aa-3.71□□□□□ -3
snR53snR53 DGK1Q12382 290 aa-3.71□□□□□ -3
snR53snR53 LSO2Q3E772 92 aaKnown RBP-3.71□□□□□ -3
snR53snR53 HIS1P00498 297 aaKnown RBP-3.72□□□□□ -3
snR53snR53 GPI14P47088 403 aaKnown RBP-3.72□□□□□ -3
snR53snR53 YNL260CP53846 198 aa-3.72□□□□□ -3
snR53snR53 PDR16P53860 351 aaKnown RBP-3.72□□□□□ -3
snR53snR53 RRG8Q06109 277 aa-3.72□□□□□ -3
snR53snR53 YMR295CQ03559 197 aa-3.73□□□□□ -3.01
snR53snR53 OST6Q03723 332 aa-3.73□□□□□ -3.01
snR53snR53 FIT3Q08907 204 aa-3.73□□□□□ -3.01
snR53snR53 REX3Q12090 404 aa-3.73□□□□□ -3.01
snR53snR53 BUB2P26448 306 aaPredicted RBP-3.74□□□□□ -3.01
snR53snR53 SRB4P32569 687 aa-3.74□□□□□ -3.01
snR53snR53 VMA8P32610 256 aaKnown RBP-3.74□□□□□ -3.01
snR53snR53 MRPL24P36525 258 aaPredicted RBP-3.74□□□□□ -3.01
snR53snR53 ATX1P38636 73 aa-3.74□□□□□ -3.01
snR53snR53 SEC16P48415 2195 aaKnown RBP-3.74□□□□□ -3.01
snR53snR53 CUR1Q06469 252 aa-3.74□□□□□ -3.01
snR53snR53 ADF1Q2V2Q1 113 aa-3.74□□□□□ -3.01
snR53snR53 DRS2P39524 1355 aa-3.75□□□□□ -3.01
snR53snR53 COA1P40452 197 aa-3.75□□□□□ -3.01
snR53snR53 YDR249CQ03787 373 aa-3.75□□□□□ -3.01
snR53snR53 GPI17Q04080 534 aa-3.75□□□□□ -3.01
snR53snR53 LRP1P38801 184 aaKnown RBP-3.76□□□□□ -3.01
snR53snR53 MRX5P47007 382 aa-3.76□□□□□ -3.01
snR53snR53 ADO1P47143 340 aaKnown RBP-3.76□□□□□ -3.01
snR53snR53 PIR1Q03178 341 aa-3.76□□□□□ -3.01
snR53snR53 YHP1Q04116 353 aa-3.76□□□□□ -3.01
snR53snR53 SHH3Q04487 196 aa-3.76□□□□□ -3.01
snR53snR53 BCP1Q06338 283 aa-3.76□□□□□ -3.01
snR53snR53 HSL1P34244 1518 aa-3.76□□□□□ -3.01
snR53snR53 IKI3Q06706 1349 aaKnown RBP-3.76□□□□□ -3.01
snR53snR53 RPB3P16370 318 aaKnown RBP-3.77□□□□□ -3.01
snR53snR53 NSA1P53136 463 aaPredicted RBP-3.77□□□□□ -3.01
snR53snR53 KSS1P14681 368 aa-3.78□□□□□ -3.01
snR53snR53 BFR1P38934 470 aaKnown RBP RIP-Chip data-3.78□□□□□ -3.01not detected
snR53snR53 SSO2P39926 295 aa-3.78□□□□□ -3.01
snR53snR53 USE1P53146 245 aa-3.78□□□□□ -3.01
snR53snR53 TAF2P23255 1407 aa-3.78□□□□□ -3.02
snR53snR53 PRS2P38620 318 aaKnown RBP-3.79□□□□□ -3.02
snR53snR53 YFR035CP43608 114 aa-3.79□□□□□ -3.02
snR53snR53 MRPL50P53724 139 aa-3.79□□□□□ -3.02
snR53snR53 YNL134CP53912 376 aaKnown RBP-3.79□□□□□ -3.02
snR53snR53 RRP36Q12481 300 aaPredicted RBP-3.79□□□□□ -3.02
snR53snR53 NSE4P43124 402 aa-3.8□□□□□ -3.02
snR53snR53 YMR099CQ03161 297 aaKnown RBP-3.8□□□□□ -3.02
snR53snR53 YOL107WQ12239 342 aa-3.8□□□□□ -3.02
snR53snR53 YLR126CQ12288 251 aa-3.8□□□□□ -3.02
snR53snR53 SNU23Q12368 194 aaPredicted RBP-3.8□□□□□ -3.02
snR53snR53 GIS3Q12418 502 aa-3.8□□□□□ -3.02
snR53snR53 TCP1P12612 559 aaKnown RBP-3.81□□□□□ -3.02
snR53snR53 SNF4P12904 322 aa-3.81□□□□□ -3.02
snR53snR53 POR2P40478 281 aa-3.81□□□□□ -3.02
snR53snR53 SGF11Q03067 99 aa-3.81□□□□□ -3.02
snR53snR53 YDR209CQ03480 137 aa-3.81□□□□□ -3.02
snR53snR53 YOR015WQ12169 119 aa-3.81□□□□□ -3.02
snR53snR53 CKS1P20486 150 aaKnown RBP-3.82□□□□□ -3.02
snR53snR53 MAK31P23059 88 aa-3.82□□□□□ -3.02
snR53snR53 PTM1P32857 523 aa-3.82□□□□□ -3.02
snR53snR53 ECM31P38122 312 aa-3.82□□□□□ -3.02
snR53snR53 YMR253CQ04835 414 aa-3.82□□□□□ -3.02
snR53snR53 BTS1Q12051 335 aa-3.82□□□□□ -3.02
snR53snR53 RSF2P46974 1380 aa-3.83□□□□□ -3.02
snR53snR53 CDC33P07260 213 aaKnown RBP-3.83□□□□□ -3.02
snR53snR53 ATG8P38182 117 aaRIP-Chip data-3.83□□□□□ -3.02not detected
snR53snR53 FMP33P46998 180 aa-3.83□□□□□ -3.02
snR53snR53 PDS1P40316 373 aaPredicted RBP-3.84□□□□□ -3.02
snR53snR53 YGR269WP40326 108 aa-3.84□□□□□ -3.02
snR53snR53 IRC21Q04772 201 aa-3.84□□□□□ -3.02
snR53snR53 BRX1Q08235 291 aaKnown RBP-3.84□□□□□ -3.02
snR53snR53 YKL075CP36083 450 aa-3.85□□□□□ -3.03
snR53snR53 CDC123Q05791 360 aa-3.85□□□□□ -3.03
snR53snR53 CDC39P25655 2108 aaKnown RBP-3.85□□□□□ -3.03
snR53snR53 GMC2Q06201 188 aa-3.86□□□□□ -3.03
snR53snR53 ATG41Q12048 136 aa-3.86□□□□□ -3.03
snR53snR53 YJR149WP47177 404 aa-3.87□□□□□ -3.03
snR53snR53 RIB3Q99258 208 aa-3.87□□□□□ -3.03
snR53snR53 TIR1P10863 254 aa-3.88□□□□□ -3.03
snR53snR53 IDP1P21954 428 aaKnown RBP-3.88□□□□□ -3.03
snR53snR53 RME1P32338 300 aaKnown RBP-3.88□□□□□ -3.03
snR53snR53 IPI1P38803 334 aaPredicted RBP-3.88□□□□□ -3.03
snR53snR53 YJR128WP47162 119 aa-3.88□□□□□ -3.03
snR53snR53 HNT1Q04344 158 aaKnown RBP-3.88□□□□□ -3.03
snR53snR53 ATG31Q12421 196 aa-3.88□□□□□ -3.03
snR53snR53 RHO1P06780 209 aaKnown RBP-3.89□□□□□ -3.03
snR53snR53 TCA17P32613 152 aa-3.89□□□□□ -3.03
snR53snR53 DML1Q03652 475 aa-3.89□□□□□ -3.03
snR53snR53 YCR090CP25654 182 aaKnown RBP-3.9□□□□□ -3.03
snR53snR53 PET100P38958 111 aa-3.9□□□□□ -3.03
snR53snR53 NAS2P40555 220 aa-3.9□□□□□ -3.03
snR53snR53 YAR1P46683 200 aa-3.9□□□□□ -3.03
snR53snR53 MCM22P47167 239 aa-3.9□□□□□ -3.03
snR53snR53 GEP7P53171 287 aa-3.9□□□□□ -3.03
snR53snR53 MRP1P10662 321 aaKnown RBP-3.91□□□□□ -3.04
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms