RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C TSC11P40061 1430 aa2.8□□□□□ -1.96
NFI1YOR156C ARP3P47117 449 aaKnown RBP2.8□□□□□ -1.96
NFI1YOR156C UBC12P52491 188 aa2.8□□□□□ -1.96
NFI1YOR156C YNL184CP53876 108 aa2.8□□□□□ -1.96
NFI1YOR156C PDR18P53756 1333 aa2.79□□□□□ -1.96
NFI1YOR156C YBR285WP38354 144 aa2.79□□□□□ -1.96
NFI1YOR156C GLE2P40066 365 aa2.79□□□□□ -1.96
NFI1YOR156C HNT1Q04344 158 aaKnown RBP2.79□□□□□ -1.96
NFI1YOR156C CKS1P20486 150 aaKnown RBP2.78□□□□□ -1.96
NFI1YOR156C SML1Q04964 104 aa2.78□□□□□ -1.96
NFI1YOR156C TY1B-JR2P47100 1755 aaKnown RBP2.78□□□□□ -1.96
NFI1YOR156C TY1B-ER2Q03619 1755 aa2.78□□□□□ -1.96
NFI1YOR156C TY1B-MR1Q04214 1755 aa2.78□□□□□ -1.96
NFI1YOR156C TY1B-MR2Q04670 1755 aaKnown RBP2.78□□□□□ -1.96
NFI1YOR156C TY1B-LR1Q12088 1755 aaKnown RBP2.78□□□□□ -1.96
NFI1YOR156C TY1B-NL1Q12112 1755 aa2.78□□□□□ -1.96
NFI1YOR156C TY1B-GR1Q12141 1755 aa2.78□□□□□ -1.96
NFI1YOR156C TY1B-BLQ12490 1755 aa2.78□□□□□ -1.96
NFI1YOR156C MBF1O14467 151 aaKnown RBP2.78□□□□□ -1.96
NFI1YOR156C CPA1P07258 411 aaKnown RBP2.78□□□□□ -1.96
NFI1YOR156C MDH2P22133 377 aa2.78□□□□□ -1.96
NFI1YOR156C IGO2Q9P305 131 aa2.78□□□□□ -1.96
NFI1YOR156C MDS3P53094 1487 aa2.78□□□□□ -1.96
NFI1YOR156C GCN2P15442 1659 aa2.78□□□□□ -1.97
NFI1YOR156C YIL177CP40434 1758 aa2.77□□□□□ -1.97
NFI1YOR156C YJL225CP40889 1758 aa2.77□□□□□ -1.97
NFI1YOR156C ATP7P30902 174 aa2.77□□□□□ -1.97
NFI1YOR156C OCH1P31755 480 aa2.77□□□□□ -1.97
NFI1YOR156C RIO1Q12196 484 aaKnown RBP2.77□□□□□ -1.97
NFI1YOR156C IRC20Q06554 1556 aa2.77□□□□□ -1.97
NFI1YOR156C PDR5P33302 1511 aaKnown RBP2.77□□□□□ -1.97
NFI1YOR156C SKI6P46948 246 aaPredicted RBP2.77□□□□□ -1.97
NFI1YOR156C DNF1P32660 1571 aa2.76□□□□□ -1.97
NFI1YOR156C VPS15P22219 1454 aa2.76□□□□□ -1.97
NFI1YOR156C NUP159P40477 1460 aa2.76□□□□□ -1.97
NFI1YOR156C FZF1P32805 299 aa2.76□□□□□ -1.97
NFI1YOR156C SHE2P36068 246 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
NFI1YOR156C GAA1P39012 614 aa2.76□□□□□ -1.97
NFI1YOR156C HOP2P53187 214 aa2.76□□□□□ -1.97
NFI1YOR156C TLG1Q03322 224 aa2.76□□□□□ -1.97
NFI1YOR156C NOC4Q06512 552 aaPredicted RBP2.76□□□□□ -1.97
NFI1YOR156C SNT2P53127 1403 aa2.76□□□□□ -1.97
NFI1YOR156C YLR419WQ06698 1435 aaKnown RBP2.76□□□□□ -1.97
NFI1YOR156C PDS1P40316 373 aaPredicted RBP2.76□□□□□ -1.97
NFI1YOR156C RTC4P53850 401 aa2.76□□□□□ -1.97
NFI1YOR156C BUD25P85052 153 aa2.76□□□□□ -1.97
NFI1YOR156C FUS2Q05670 677 aa2.76□□□□□ -1.97
NFI1YOR156C YOL024WQ08172 172 aa2.76□□□□□ -1.97
NFI1YOR156C ODC2Q99297 307 aa2.76□□□□□ -1.97
NFI1YOR156C SRB8P25648 1427 aa2.75□□□□□ -1.97
NFI1YOR156C VTH1P40438 1549 aa2.75□□□□□ -1.97
NFI1YOR156C VTH2P40890 1549 aa2.75□□□□□ -1.97
NFI1YOR156C KDX1P36005 433 aa2.75□□□□□ -1.97
NFI1YOR156C AVT2P39981 480 aa2.75□□□□□ -1.97
NFI1YOR156C OPY1P38271 328 aa2.74□□□□□ -1.97
NFI1YOR156C VTC1P40046 129 aaRIP-Chip data2.74□□□□□ -1.97not detected
NFI1YOR156C LSM4P40070 187 aaKnown RBP2.74□□□□□ -1.97
NFI1YOR156C CAF4P36130 643 aa2.74□□□□□ -1.97
NFI1YOR156C NRK1P53915 240 aa2.74□□□□□ -1.97
NFI1YOR156C FMP23P38231 175 aa2.73□□□□□ -1.97
NFI1YOR156C DGA1Q08650 418 aa2.73□□□□□ -1.97
NFI1YOR156C GRE1Q08969 168 aa2.73□□□□□ -1.97
NFI1YOR156C TAH1P25638 111 aaPredicted RBP2.73□□□□□ -1.97
NFI1YOR156C BAT2P47176 376 aaKnown RBP2.73□□□□□ -1.97
NFI1YOR156C ARO8P53090 500 aaKnown RBP2.73□□□□□ -1.97
NFI1YOR156C MPC3P53311 146 aa2.73□□□□□ -1.97
NFI1YOR156C SNO1Q03144 224 aa2.73□□□□□ -1.97
NFI1YOR156C ATG40Q99325 256 aa2.73□□□□□ -1.97
NFI1YOR156C RPO21P04050 1733 aaKnown RBP2.73□□□□□ -1.97
NFI1YOR156C CAT8P39113 1433 aa2.72□□□□□ -1.97
NFI1YOR156C YCR090CP25654 182 aaKnown RBP2.72□□□□□ -1.97
NFI1YOR156C SHG1P38337 142 aa2.72□□□□□ -1.97
NFI1YOR156C YJR111CP47148 283 aaKnown RBP2.72□□□□□ -1.97
NFI1YOR156C SAC3P46674 1301 aa2.72□□□□□ -1.97
NFI1YOR156C SNF4P12904 322 aa2.71□□□□□ -1.97
NFI1YOR156C YEA4P40004 342 aa2.71□□□□□ -1.97
NFI1YOR156C SER2P42941 309 aa2.71□□□□□ -1.97
NFI1YOR156C POP3P53833 195 aaPredicted RBP2.71□□□□□ -1.97
NFI1YOR156C NTE1Q04958 1679 aa2.71□□□□□ -1.98
NFI1YOR156C CDC25P04821 1589 aa2.71□□□□□ -1.98
NFI1YOR156C ARO1P08566 1588 aaKnown RBP2.71□□□□□ -1.98
NFI1YOR156C YLR031WQ07978 186 aa2.71□□□□□ -1.98
NFI1YOR156C PDR12Q02785 1511 aa2.71□□□□□ -1.98
NFI1YOR156C YLR236CA0A023PZG4 107 aa2.7□□□□□ -1.98
NFI1YOR156C YKR041WP36134 250 aa2.7□□□□□ -1.98
NFI1YOR156C YBR209WP38311 105 aa2.7□□□□□ -1.98
NFI1YOR156C YBR219CP38317 127 aa2.7□□□□□ -1.98
NFI1YOR156C YFR054CP43622 192 aa2.7□□□□□ -1.98
NFI1YOR156C GRX8Q05926 109 aa2.7□□□□□ -1.98
NFI1YOR156C YDL085C-AQ3E7B7 68 aaKnown RBP2.7□□□□□ -1.98
NFI1YOR156C GEA2P39993 1459 aaKnown RBP2.7□□□□□ -1.98
NFI1YOR156C POR1P04840 283 aaKnown RBP2.7□□□□□ -1.98
NFI1YOR156C PAN3P36102 679 aaPredicted RBP2.7□□□□□ -1.98
NFI1YOR156C TY3B-IQ7LHG5 1498 aaKnown RBP2.7□□□□□ -1.98
NFI1YOR156C RPA190P10964 1664 aaKnown RBP2.7□□□□□ -1.98
NFI1YOR156C TRX3P25372 127 aa2.69□□□□□ -1.98
NFI1YOR156C SEC72P39742 193 aaKnown RBP2.69□□□□□ -1.98
NFI1YOR156C BEM2P39960 2167 aaKnown RBP2.69□□□□□ -1.98
NFI1YOR156C YER135CP40082 130 aa2.69□□□□□ -1.98
NFI1YOR156C YMR315WQ04869 349 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms