RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeastyeast

Gene VAM10, Length 345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM10YOR068C VPS71Q03433 280 aa2.83□□□□□ -1.96
VAM10YOR068C ATG10Q07879 167 aa2.83□□□□□ -1.96
VAM10YOR068C SPC3Q12133 184 aa2.83□□□□□ -1.96
VAM10YOR068C PCL9Q12477 304 aa2.83□□□□□ -1.96
VAM10YOR068C YGL194C-AQ2V2P6 80 aa2.83□□□□□ -1.96
VAM10YOR068C MYO2P19524 1574 aaKnown RBP2.83□□□□□ -1.96
VAM10YOR068C YAL064W-BO13512 126 aa2.82□□□□□ -1.96
VAM10YOR068C RAD6P06104 172 aa2.82□□□□□ -1.96
VAM10YOR068C RPL30P14120 105 aaKnown RBP2.82□□□□□ -1.96
VAM10YOR068C ATG15P25641 520 aa2.82□□□□□ -1.96
VAM10YOR068C SRP21P32342 167 aa2.82□□□□□ -1.96
VAM10YOR068C SRB6P32570 121 aa2.82□□□□□ -1.96
VAM10YOR068C GPX2P38143 162 aa2.82□□□□□ -1.96
VAM10YOR068C ATG12P38316 186 aa2.82□□□□□ -1.96
VAM10YOR068C YHL044WP38727 235 aa2.82□□□□□ -1.96
VAM10YOR068C RPL14BP38754 138 aaKnown RBP2.82□□□□□ -1.96
VAM10YOR068C PTI1P39927 425 aaPredicted RBP2.82□□□□□ -1.96
VAM10YOR068C AVT6P40074 448 aa2.82□□□□□ -1.96
VAM10YOR068C YIL012WP40551 113 aa2.82□□□□□ -1.96
VAM10YOR068C GNA1P43577 159 aaPredicted RBP2.82□□□□□ -1.96
VAM10YOR068C SFT1P43682 97 aa2.82□□□□□ -1.96
VAM10YOR068C GPI2P46961 280 aa2.82□□□□□ -1.96
VAM10YOR068C TOS8P53147 276 aa2.82□□□□□ -1.96
VAM10YOR068C YGR015CP53208 328 aa2.82□□□□□ -1.96
VAM10YOR068C VHT1P53241 593 aa2.82□□□□□ -1.96
VAM10YOR068C SWS2P53937 143 aa2.82□□□□□ -1.96
VAM10YOR068C THI74Q04083 370 aa2.82□□□□□ -1.96
VAM10YOR068C RNH202Q05635 350 aa2.82□□□□□ -1.96
VAM10YOR068C GAT3Q07928 141 aa2.82□□□□□ -1.96
VAM10YOR068C IES4Q08561 116 aa2.82□□□□□ -1.96
VAM10YOR068C MCT1Q12283 360 aa2.82□□□□□ -1.96
VAM10YOR068C MPD1Q12404 318 aaKnown RBP2.82□□□□□ -1.96
VAM10YOR068C PRM4Q12498 284 aa2.82□□□□□ -1.96
VAM10YOR068C YSP2Q06681 1438 aa2.82□□□□□ -1.96
VAM10YOR068C BGL2P15703 313 aaKnown RBP2.81□□□□□ -1.96
VAM10YOR068C SPO13P23624 291 aa2.81□□□□□ -1.96
VAM10YOR068C YBR063CP38083 404 aa2.81□□□□□ -1.96
VAM10YOR068C YHR130CP38834 111 aa2.81□□□□□ -1.96
VAM10YOR068C SPC25P40014 221 aa2.81□□□□□ -1.96
VAM10YOR068C GON7P46984 123 aa2.81□□□□□ -1.96
VAM10YOR068C DIE2P50076 525 aa2.81□□□□□ -1.96
VAM10YOR068C YGR026WP53217 278 aa2.81□□□□□ -1.96
VAM10YOR068C CAB4P53332 305 aa2.81□□□□□ -1.96
VAM10YOR068C ALG9P53868 555 aaKnown RBP2.81□□□□□ -1.96
VAM10YOR068C YNL033WP53964 284 aa2.81□□□□□ -1.96
VAM10YOR068C YNL019CP53975 284 aa2.81□□□□□ -1.96
VAM10YOR068C INP1Q03694 420 aa2.81□□□□□ -1.96
VAM10YOR068C YLR177WQ06251 628 aa2.81□□□□□ -1.96
VAM10YOR068C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
VAM10YOR068C YOL160WQ08321 113 aa2.81□□□□□ -1.96
VAM10YOR068C HUT1Q12520 339 aa2.81□□□□□ -1.96
VAM10YOR068C RPL13AQ12690 199 aaPredicted RBP2.81□□□□□ -1.96
VAM10YOR068C YCL021W-AQ96VH3 125 aa2.81□□□□□ -1.96
VAM10YOR068C HHF1P02309 103 aaKnown RBP2.8□□□□□ -1.96
VAM10YOR068C RPB5P20434 215 aa2.8□□□□□ -1.96
VAM10YOR068C RPL16AP26784 199 aaKnown RBP2.8□□□□□ -1.96
VAM10YOR068C PTM1P32857 523 aa2.8□□□□□ -1.96
VAM10YOR068C AVT5P38176 459 aa2.8□□□□□ -1.96
VAM10YOR068C RPB11P38902 120 aa2.8□□□□□ -1.96
VAM10YOR068C IPT1P38954 527 aa2.8□□□□□ -1.96
VAM10YOR068C RPL13BP40212 199 aaKnown RBP2.8□□□□□ -1.96
VAM10YOR068C PRM5P40476 318 aa2.8□□□□□ -1.96
VAM10YOR068C YGR018CP53211 109 aa2.8□□□□□ -1.96
VAM10YOR068C FMP48P53233 369 aa2.8□□□□□ -1.96
VAM10YOR068C YGR164WP53291 111 aa2.8□□□□□ -1.96
VAM10YOR068C PGA1P53896 198 aa2.8□□□□□ -1.96
VAM10YOR068C YNL010WP53981 241 aaKnown RBP2.8□□□□□ -1.96
VAM10YOR068C PET191Q02772 108 aa2.8□□□□□ -1.96
VAM10YOR068C GRH1Q04410 372 aaKnown RBP2.8□□□□□ -1.96
VAM10YOR068C LOA1Q06508 300 aa2.8□□□□□ -1.96
VAM10YOR068C YOR376WQ08900 122 aa2.8□□□□□ -1.96
VAM10YOR068C FEX2Q08991 375 aa2.8□□□□□ -1.96
VAM10YOR068C RAD28Q12021 506 aa2.8□□□□□ -1.96
VAM10YOR068C YGK3Q12222 375 aaPredicted RBP2.8□□□□□ -1.96
VAM10YOR068C TSC3Q3E790 80 aa2.8□□□□□ -1.96
VAM10YOR068C YCR024C-BQ3E7Z8 88 aa2.8□□□□□ -1.96
VAM10YOR068C ISD11Q6Q560 94 aa2.8□□□□□ -1.96
VAM10YOR068C YRF1-3P0CX14 1859 aa2.79□□□□□ -1.96
VAM10YOR068C YRF1-7P0CX15 1859 aa2.79□□□□□ -1.96
VAM10YOR068C YRF1-6P53819 1859 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-LR1P0C2J3 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-FP0CX63 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-GR2P0CX64 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-CP25384 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-DR2Q03494 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-DR3Q07791 1770 aaKnown RBP2.79□□□□□ -1.96
VAM10YOR068C TY2B-OR1Q12113 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-DR1Q12472 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-BQ12491 1770 aa2.79□□□□□ -1.96
VAM10YOR068C TY2B-OR2Q12501 1770 aa2.79□□□□□ -1.96
VAM10YOR068C VPS15P22219 1454 aa2.79□□□□□ -1.96
VAM10YOR068C AUS1Q08409 1394 aa2.79□□□□□ -1.96
VAM10YOR068C MBF1O14467 151 aaKnown RBP2.79□□□□□ -1.96
VAM10YOR068C ADH1P00330 348 aaKnown RBP2.79□□□□□ -1.96
VAM10YOR068C SPS100P13130 326 aa2.79□□□□□ -1.96
VAM10YOR068C MRPL20P22354 195 aaPredicted RBP2.79□□□□□ -1.96
VAM10YOR068C YKR070WP36151 352 aaKnown RBP2.79□□□□□ -1.96
VAM10YOR068C PTH1P38876 190 aaKnown RBP2.79□□□□□ -1.96
VAM10YOR068C GAA1P39012 614 aa2.79□□□□□ -1.96
VAM10YOR068C AVT2P39981 480 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms