RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W TMA10Q06177 86 aa3.15□□□□□ -1.91
ROD1YOR018W RDL1Q12305 139 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W AIM45Q12480 344 aaKnown RBP3.15□□□□□ -1.91
ROD1YOR018W SPS4P09937 338 aa3.14□□□□□ -1.91
ROD1YOR018W MRS3P10566 314 aa3.14□□□□□ -1.91
ROD1YOR018W VMA11P32842 164 aa3.14□□□□□ -1.91
ROD1YOR018W YKR045CP36138 183 aa3.14□□□□□ -1.91
ROD1YOR018W IKI1P38874 309 aa3.14□□□□□ -1.91
ROD1YOR018W FLO5P38894 1075 aa3.14□□□□□ -1.91
ROD1YOR018W YEA6P39953 335 aa3.14□□□□□ -1.91
ROD1YOR018W SGN1P40561 250 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
ROD1YOR018W LSM1P47017 172 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W PKP2P53170 491 aa3.14□□□□□ -1.91
ROD1YOR018W YNR064CP53750 290 aa3.14□□□□□ -1.91
ROD1YOR018W YNL046WP53956 172 aa3.14□□□□□ -1.91
ROD1YOR018W MEH1Q02205 184 aa3.14□□□□□ -1.91
ROD1YOR018W ERP1Q05359 219 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W BER1Q06688 274 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W CSI2Q08054 341 aa3.14□□□□□ -1.91
ROD1YOR018W POC4Q12245 148 aaPredicted RBP3.14□□□□□ -1.91
ROD1YOR018W ROX3P25046 220 aa3.14□□□□□ -1.91
ROD1YOR018W YCR101CP25607 182 aa3.14□□□□□ -1.91
ROD1YOR018W ADH5P38113 351 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W ERV15P38312 142 aa3.14□□□□□ -1.91
ROD1YOR018W LSM12P38828 187 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W GCV3P39726 170 aaPredicted RBP3.14□□□□□ -1.91
ROD1YOR018W BMT5P40493 336 aa3.14□□□□□ -1.91
ROD1YOR018W ARP3P47117 449 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W TTI2P47168 421 aa3.14□□□□□ -1.91
ROD1YOR018W UBC11P52492 156 aa3.14□□□□□ -1.91
ROD1YOR018W GEP7P53171 287 aa3.14□□□□□ -1.91
ROD1YOR018W YGR151CP53287 111 aa3.14□□□□□ -1.91
ROD1YOR018W YIF1P53845 314 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W ACT1P60010 375 aaKnown RBP3.14□□□□□ -1.91
ROD1YOR018W DYN2Q02647 92 aa3.14□□□□□ -1.91
ROD1YOR018W YPL067CQ02754 198 aa3.14□□□□□ -1.91
ROD1YOR018W NOC4Q06512 552 aaPredicted RBP3.14□□□□□ -1.91
ROD1YOR018W ATG31Q12421 196 aa3.14□□□□□ -1.91
ROD1YOR018W BOL1Q3E793 110 aa3.14□□□□□ -1.91
ROD1YOR018W GDH1P07262 454 aaKnown RBP3.13□□□□□ -1.91
ROD1YOR018W YUH1P35127 236 aa3.13□□□□□ -1.91
ROD1YOR018W YKL162CP36052 402 aa3.13□□□□□ -1.91
ROD1YOR018W YIL077CP40508 320 aa3.13□□□□□ -1.91
ROD1YOR018W IRC23Q08416 157 aa3.13□□□□□ -1.91
ROD1YOR018W ATP10P18496 279 aa3.13□□□□□ -1.91
ROD1YOR018W MIA40P36046 403 aa3.13□□□□□ -1.91
ROD1YOR018W YJL163CP46996 555 aa3.13□□□□□ -1.91
ROD1YOR018W SNN1P48232 102 aa3.13□□□□□ -1.91
ROD1YOR018W PHO23P50947 330 aa3.13□□□□□ -1.91
ROD1YOR018W YGR050CP53231 118 aa3.13□□□□□ -1.91
ROD1YOR018W ADD37Q03233 198 aa3.13□□□□□ -1.91
ROD1YOR018W YMR082CQ04276 118 aa3.13□□□□□ -1.91
ROD1YOR018W FSH2Q05015 223 aa3.13□□□□□ -1.91
ROD1YOR018W IRC25Q07951 179 aa3.13□□□□□ -1.91
ROD1YOR018W YOR015WQ12169 119 aa3.13□□□□□ -1.91
ROD1YOR018W CPR5P35176 225 aa3.12□□□□□ -1.91
ROD1YOR018W ATP3P38077 311 aaKnown RBP3.12□□□□□ -1.91
ROD1YOR018W YPC1P38298 316 aa3.12□□□□□ -1.91
ROD1YOR018W ASP1P38986 381 aaPredicted RBP3.12□□□□□ -1.91
ROD1YOR018W COX18P53239 316 aa3.12□□□□□ -1.91
ROD1YOR018W SMM1P53720 384 aaKnown RBP3.12□□□□□ -1.91
ROD1YOR018W GPI15P53961 229 aa3.12□□□□□ -1.91
ROD1YOR018W YHP1Q04116 353 aa3.12□□□□□ -1.91
ROD1YOR018W PML1Q07930 204 aaPredicted RBP3.12□□□□□ -1.91
ROD1YOR018W YBR085C-AO43137 85 aa3.12□□□□□ -1.91
ROD1YOR018W FCY2P17064 533 aa3.12□□□□□ -1.91
ROD1YOR018W CDC50P25656 391 aa3.12□□□□□ -1.91
ROD1YOR018W VMA8P32610 256 aaKnown RBP3.12□□□□□ -1.91
ROD1YOR018W HCH1P53834 153 aa3.12□□□□□ -1.91
ROD1YOR018W MCH1Q07376 486 aa3.12□□□□□ -1.91
ROD1YOR018W YPD1Q07688 167 aa3.12□□□□□ -1.91
ROD1YOR018W IZH3Q07959 543 aa3.12□□□□□ -1.91
ROD1YOR018W PRR2Q12310 699 aa3.12□□□□□ -1.91
ROD1YOR018W YMR316C-AI2HB70 103 aa3.11□□□□□ -1.91
ROD1YOR018W MRP2P10663 115 aaPredicted RBP3.11□□□□□ -1.91
ROD1YOR018W NOP1P15646 327 aaKnown RBP3.11□□□□□ -1.91
ROD1YOR018W RPL14AP36105 138 aaKnown RBP3.11□□□□□ -1.91
ROD1YOR018W LAG1P38703 411 aa3.11□□□□□ -1.91
ROD1YOR018W RPL14BP38754 138 aaKnown RBP3.11□□□□□ -1.91
ROD1YOR018W YJL213WP40896 331 aa3.11□□□□□ -1.91
ROD1YOR018W YJR056CP47115 236 aa3.11□□□□□ -1.91
ROD1YOR018W SBH2P52871 88 aa3.11□□□□□ -1.91
ROD1YOR018W TIM11P81449 96 aaPredicted RBP3.11□□□□□ -1.91
ROD1YOR018W TIM44Q01852 431 aa3.11□□□□□ -1.91
ROD1YOR018W YMR090WQ04304 227 aaKnown RBP3.11□□□□□ -1.91
ROD1YOR018W RPL9AP05738 191 aaKnown RBP3.11□□□□□ -1.91
ROD1YOR018W UBI4P0CG63 381 aaKnown RBP3.11□□□□□ -1.91
ROD1YOR018W SPO13P23624 291 aa3.11□□□□□ -1.91
ROD1YOR018W ERV1P27882 189 aa3.11□□□□□ -1.91
ROD1YOR018W PMU1P36069 295 aa3.11□□□□□ -1.91
ROD1YOR018W SNX4P47057 423 aa3.11□□□□□ -1.91
ROD1YOR018W ODC1Q03028 310 aa3.11□□□□□ -1.91
ROD1YOR018W MIX17Q03667 156 aa3.11□□□□□ -1.91
ROD1YOR018W YMR166CQ03829 368 aa3.11□□□□□ -1.91
ROD1YOR018W LPP1Q04396 274 aa3.11□□□□□ -1.91
ROD1YOR018W PAM18Q07914 168 aa3.11□□□□□ -1.91
ROD1YOR018W GEP5Q12393 293 aa3.11□□□□□ -1.91
ROD1YOR018W RAX2Q12465 1220 aa3.11□□□□□ -1.91
ROD1YOR018W UPS2P35200 230 aa3.1□□□□□ -1.91
ROD1YOR018W WSS1P38838 269 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms