RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C SWD3P38123 315 aa2.54□□□□□ -2
HRD1YOL013C FMP23P38231 175 aa2.54□□□□□ -2
HRD1YOL013C YHI9P38765 294 aa2.54□□□□□ -2
HRD1YOL013C UFD1P53044 361 aa2.54□□□□□ -2
HRD1YOL013C RIM15P43565 1770 aa2.54□□□□□ -2
HRD1YOL013C UBI4P0CG63 381 aaKnown RBP2.53□□□□□ -2
HRD1YOL013C COX10P21592 462 aa2.53□□□□□ -2
HRD1YOL013C MRPS28P21771 286 aa2.53□□□□□ -2
HRD1YOL013C MAG1P22134 296 aaKnown RBP2.53□□□□□ -2
HRD1YOL013C RPF1P38805 295 aaKnown RBP2.53□□□□□ -2
HRD1YOL013C ASP1P38986 381 aaPredicted RBP2.53□□□□□ -2
HRD1YOL013C HPT1Q04178 221 aaKnown RBP2.53□□□□□ -2
HRD1YOL013C YPL264CQ08980 353 aa2.53□□□□□ -2
HRD1YOL013C YOL085CQ99345 113 aa2.53□□□□□ -2
HRD1YOL013C PDR18P53756 1333 aa2.53□□□□□ -2
HRD1YOL013C YRF1-3P0CX14 1859 aa2.53□□□□□ -2
HRD1YOL013C YRF1-7P0CX15 1859 aa2.53□□□□□ -2
HRD1YOL013C YRF1-6P53819 1859 aa2.53□□□□□ -2
HRD1YOL013C YLR462WO13556 202 aa2.53□□□□□ -2
HRD1YOL013C PET9P18239 318 aaKnown RBP2.53□□□□□ -2
HRD1YOL013C PEX34P25584 144 aa2.53□□□□□ -2
HRD1YOL013C SEC17P32602 292 aa2.53□□□□□ -2
HRD1YOL013C VMA22P38784 181 aa2.53□□□□□ -2
HRD1YOL013C YEL075CP39972 122 aa2.53□□□□□ -2
HRD1YOL013C UFE1P41834 346 aa2.53□□□□□ -2
HRD1YOL013C YJR015WP47090 510 aa2.53□□□□□ -2
HRD1YOL013C VMA10P48836 114 aaKnown RBP2.53□□□□□ -2
HRD1YOL013C ORM1P53224 222 aa2.53□□□□□ -2
HRD1YOL013C YDR249CQ03787 373 aa2.53□□□□□ -2
HRD1YOL013C YMR320WQ04897 101 aa2.53□□□□□ -2
HRD1YOL013C SLD7Q08457 257 aa2.53□□□□□ -2
HRD1YOL013C YDL211CQ12121 372 aa2.53□□□□□ -2
HRD1YOL013C RAD50P12753 1312 aa2.53□□□□□ -2
HRD1YOL013C UTP10P42945 1769 aaKnown RBP2.52□□□□□ -2.01
HRD1YOL013C CKS1P20486 150 aaKnown RBP2.52□□□□□ -2.01
HRD1YOL013C ARO2P28777 376 aaKnown RBP2.52□□□□□ -2.01
HRD1YOL013C TVP38P36164 337 aa2.52□□□□□ -2.01
HRD1YOL013C YGL101WP53144 215 aa2.52□□□□□ -2.01
HRD1YOL013C CAX4P53223 239 aa2.52□□□□□ -2.01
HRD1YOL013C PGA1P53896 198 aa2.52□□□□□ -2.01
HRD1YOL013C DID2P69771 204 aa2.52□□□□□ -2.01
HRD1YOL013C YMD8Q03697 442 aa2.52□□□□□ -2.01
HRD1YOL013C PKR1Q03880 122 aaKnown RBP2.52□□□□□ -2.01
HRD1YOL013C TRM12Q04235 462 aa2.52□□□□□ -2.01
HRD1YOL013C MRX8Q05473 314 aa2.52□□□□□ -2.01
HRD1YOL013C BBP1Q12365 385 aa2.52□□□□□ -2.01
HRD1YOL013C MRPL27P36526 146 aaPredicted RBP2.51□□□□□ -2.01
HRD1YOL013C YBR063CP38083 404 aa2.51□□□□□ -2.01
HRD1YOL013C YDR476CQ03362 224 aa2.51□□□□□ -2.01
HRD1YOL013C TVP15Q03860 143 aa2.51□□□□□ -2.01
HRD1YOL013C TSA2Q04120 196 aa2.51□□□□□ -2.01
HRD1YOL013C YPL257WQ08974 193 aa2.51□□□□□ -2.01
HRD1YOL013C YOR342CQ12182 319 aa2.51□□□□□ -2.01
HRD1YOL013C PST1Q12355 444 aa2.51□□□□□ -2.01
HRD1YOL013C MPD1Q12404 318 aaKnown RBP2.51□□□□□ -2.01
HRD1YOL013C COX4P04037 155 aa2.5□□□□□ -2.01
HRD1YOL013C TOM40P23644 387 aaKnown RBP2.5□□□□□ -2.01
HRD1YOL013C SFC1P33303 322 aa2.5□□□□□ -2.01
HRD1YOL013C YBR285WP38354 144 aa2.5□□□□□ -2.01
HRD1YOL013C PRS3P38689 320 aaKnown RBP2.5□□□□□ -2.01
HRD1YOL013C TEM1P38987 245 aa2.5□□□□□ -2.01
HRD1YOL013C MIC19P43594 170 aa2.5□□□□□ -2.01
HRD1YOL013C SDT1P53078 280 aa2.5□□□□□ -2.01
HRD1YOL013C PLP1Q04004 230 aa2.5□□□□□ -2.01
HRD1YOL013C THI74Q04083 370 aa2.5□□□□□ -2.01
HRD1YOL013C DAS2Q12084 232 aa2.5□□□□□ -2.01
HRD1YOL013C MCP1Q12106 302 aa2.5□□□□□ -2.01
HRD1YOL013C GEP5Q12393 293 aa2.5□□□□□ -2.01
HRD1YOL013C YOR020W-AQ3E824 90 aa2.5□□□□□ -2.01
HRD1YOL013C ADE6P38972 1358 aaKnown RBP2.5□□□□□ -2.01
HRD1YOL013C Q0255P03881 472 aa2.5□□□□□ -2.01
HRD1YOL013C YLR156WP0CE96 114 aa2.5□□□□□ -2.01
HRD1YOL013C YLR159WP0CE97 114 aa2.5□□□□□ -2.01
HRD1YOL013C YLR161WP0CE98 114 aa2.5□□□□□ -2.01
HRD1YOL013C SPO13P23624 291 aa2.5□□□□□ -2.01
HRD1YOL013C YIL054WP40524 105 aa2.5□□□□□ -2.01
HRD1YOL013C CIN5P40917 295 aa2.5□□□□□ -2.01
HRD1YOL013C LSM3P57743 89 aaKnown RBP2.5□□□□□ -2.01
HRD1YOL013C TMA20P89886 181 aaPredicted RBP2.5□□□□□ -2.01
HRD1YOL013C DYN2Q02647 92 aa2.5□□□□□ -2.01
HRD1YOL013C RSM10Q03201 203 aa2.5□□□□□ -2.01
HRD1YOL013C SMT3Q12306 101 aaKnown RBP2.5□□□□□ -2.01
HRD1YOL013C TSC3Q3E790 80 aa2.5□□□□□ -2.01
HRD1YOL013C NHP6AP11632 93 aaKnown RBP2.49□□□□□ -2.01
HRD1YOL013C RNP1P32385 249 aa2.49□□□□□ -2.01
HRD1YOL013C CPR5P35176 225 aa2.49□□□□□ -2.01
HRD1YOL013C RCN1P36054 211 aa2.49□□□□□ -2.01
HRD1YOL013C POP4P38336 279 aa2.49□□□□□ -2.01
HRD1YOL013C YEA4P40004 342 aa2.49□□□□□ -2.01
HRD1YOL013C APQ12P40532 138 aa2.49□□□□□ -2.01
HRD1YOL013C GPI14P47088 403 aaKnown RBP2.49□□□□□ -2.01
HRD1YOL013C RBL2P48606 106 aaKnown RBP2.49□□□□□ -2.01
HRD1YOL013C TIM8P57744 87 aa2.49□□□□□ -2.01
HRD1YOL013C YML108WQ03759 105 aa2.49□□□□□ -2.01
HRD1YOL013C RAV2Q03956 351 aa2.49□□□□□ -2.01
HRD1YOL013C CSN9Q03981 162 aa2.49□□□□□ -2.01
HRD1YOL013C PST2Q12335 198 aaKnown RBP2.49□□□□□ -2.01
HRD1YOL013C RPO41P13433 1351 aaKnown RBP2.48□□□□□ -2.01
HRD1YOL013C RPB3P16370 318 aaKnown RBP2.48□□□□□ -2.01
HRD1YOL013C GPI18P38211 433 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms