RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	HOC1	P47124	396 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	TIM13	P53299	105 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	YMR099C	Q03161	297 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	DIG2	Q03373	323 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	VPS71	Q03433	280 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	RRP17	Q04031	235 aa	Predicted RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	YLR031W	Q07978	186 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	IRC23	Q08416	157 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	MCP1	Q12106	302 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	COA3	Q3E7B2	85 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	ACC1	Q00955	2233 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	POR1	P04840	283 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	HAP2	P06774	265 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	RPL27A	P0C2H6	136 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	RPS5	P26783	225 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	BMH2	P34730	273 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	YBR096W	P38256	230 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	HTD2	P38790	280 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	APS3	P47064	194 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	LSM7	P53905	115 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	YNL134C	P53912	376 aa	Known RBP	0.02	□□□□□ -2.41
RCO1	YMR075W	YLR460C	P54007	376 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	DAD4	P69851	72 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	BNA7	Q04066	261 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	UPS1	Q05776	175 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	LCL2	Q08045	131 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	YOR015W	Q12169	119 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	YOR342C	Q12182	319 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	YFR032C-B	Q8TGU2	87 aa		0.02	□□□□□ -2.41
RCO1	YMR075W	AQY2	P0CD90	149 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	SNF4	P12904	322 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YMR31	P19955	123 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	SEC14	P24280	304 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	YCR001W	P25347	104 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YBL010C	P32788	280 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	PTC1	P35182	281 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	UTP30	P36144	274 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	MIC12	P38341	106 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YHL018W	P38744	120 aa	Predicted RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	RPS29B	P41058	56 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	IRC18	P47056	224 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	SOL1	P50278	321 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	SBH1	P52870	82 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	GEP7	P53171	287 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	NOP19	P53317	196 aa	Predicted RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	RTC4	P53850	401 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YNL122C	P53921	115 aa	Predicted RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	COG5	P53951	403 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	VPS28	Q02767	242 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YDC1	Q02896	317 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YDR391C	Q04170	232 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	IRC21	Q04772	201 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YMR252C	Q04814	134 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YMR253C	Q04835	414 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	KAP95	Q06142	861 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	FIT2	Q08906	153 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YDL157C	Q12082	118 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	CCW12	Q12127	133 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	FCY1	Q12178	158 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YHR214C-E	Q8TGK0	99 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	THP2	O13539	261 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	MBF1	O14467	151 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	RPS22A	P0C0W1	130 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	COQ1	P18900	473 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	SEC17	P32602	292 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	PAM17	P36147	197 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	SRL3	P36167	246 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YBR242W	P38331	238 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YHL037C	P38733	133 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	NSA2	P40078	261 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	SER2	P42941	309 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	RPC17	P47076	161 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YNL033W	P53964	284 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	MGR2	Q02889	113 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	MRPS17	Q03246	237 aa	Predicted RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	YML079W	Q03629	201 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YDR249C	Q03787	373 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YLR283W	Q05867	314 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	KEI1	Q06346	221 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	NAT3	Q06504	195 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YOL014W	Q08110	124 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.01	□□□□□ -2.41
RCO1	YMR075W	COA6	Q3E846	104 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	YML100W-A	Q8TGT0	57 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	NCB2	Q92317	146 aa		0.01	□□□□□ -2.41
RCO1	YMR075W	CDC33	P07260	213 aa	Known RBP	0	□□□□□ -2.41
RCO1	YMR075W	MER1	P16523	270 aa		0	□□□□□ -2.41
RCO1	YMR075W	ATP15	P21306	62 aa		0	□□□□□ -2.41
RCO1	YMR075W	HYP2	P23301	157 aa	Known RBP	0	□□□□□ -2.41
RCO1	YMR075W	OCH1	P31755	480 aa		0	□□□□□ -2.41
RCO1	YMR075W	SPS18	P32572	300 aa		0	□□□□□ -2.41
RCO1	YMR075W	TCA17	P32613	152 aa		0	□□□□□ -2.41
RCO1	YMR075W	NTF2	P33331	125 aa	Known RBP	0	□□□□□ -2.41
RCO1	YMR075W	YKR070W	P36151	352 aa	Known RBP	0	□□□□□ -2.41
RCO1	YMR075W	SPC25	P40014	221 aa		0	□□□□□ -2.41
RCO1	YMR075W	YJR149W	P47177	404 aa		0	□□□□□ -2.41
RCO1	YMR075W	YGL235W	P53071	178 aa		0	□□□□□ -2.41
RCO1	YMR075W	ALG13	P53178	202 aa		0	□□□□□ -2.41
RCO1	YMR075W	CGR1	P53188	120 aa		0	□□□□□ -2.41
RCO1	YMR075W	YGR050C	P53231	118 aa		0	□□□□□ -2.41

Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms