RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RPS1AP33442 255 aaKnown RBP2.55□□□□□ -2
USB1YLR132C YKL102CP34249 101 aa2.55□□□□□ -2
USB1YLR132C COX15P40086 486 aa2.55□□□□□ -2
USB1YLR132C ARC15P40518 154 aaRIP-Chip data2.55□□□□□ -2not detected
USB1YLR132C RGM1Q00453 211 aa2.55□□□□□ -2
USB1YLR132C YDR249CQ03787 373 aa2.55□□□□□ -2
USB1YLR132C RAF1Q06891 181 aa2.55□□□□□ -2
USB1YLR132C YET3Q07451 203 aa2.55□□□□□ -2
USB1YLR132C YPL257WQ08974 193 aa2.55□□□□□ -2
USB1YLR132C GET4Q12125 312 aa2.55□□□□□ -2
USB1YLR132C YLR126CQ12288 251 aa2.55□□□□□ -2
USB1YLR132C SGA1P08019 549 aa2.54□□□□□ -2
USB1YLR132C CCA1P21269 546 aa2.54□□□□□ -2
USB1YLR132C MDH2P22133 377 aa2.54□□□□□ -2
USB1YLR132C RPL24BP24000 155 aaKnown RBP2.54□□□□□ -2
USB1YLR132C RAD51P25454 400 aa2.54□□□□□ -2
USB1YLR132C PBN1P25580 416 aa2.54□□□□□ -2
USB1YLR132C ETR1P38071 380 aa2.54□□□□□ -2
USB1YLR132C MRPL49P40858 161 aaPredicted RBP2.54□□□□□ -2
USB1YLR132C YGL034CP53186 121 aa2.54□□□□□ -2
USB1YLR132C SLM2P53955 656 aa2.54□□□□□ -2
USB1YLR132C NCE101Q02820 53 aa2.54□□□□□ -2
USB1YLR132C MET31Q03081 177 aa2.54□□□□□ -2
USB1YLR132C SNF6P18888 332 aa2.53□□□□□ -2
USB1YLR132C PPA2P28239 310 aa2.53□□□□□ -2
USB1YLR132C ERG24P32462 438 aaKnown RBP2.53□□□□□ -2
USB1YLR132C SCM4P32564 187 aa2.53□□□□□ -2
USB1YLR132C YKL075CP36083 450 aa2.53□□□□□ -2
USB1YLR132C YCR087C-AP37263 153 aa2.53□□□□□ -2
USB1YLR132C AIM2P39721 246 aa2.53□□□□□ -2
USB1YLR132C AIF1P52923 378 aa2.53□□□□□ -2
USB1YLR132C YGR026WP53217 278 aa2.53□□□□□ -2
USB1YLR132C YMR279CQ03263 540 aa2.53□□□□□ -2
USB1YLR132C YML108WQ03759 105 aa2.53□□□□□ -2
USB1YLR132C HTL1Q9URQ5 78 aa2.53□□□□□ -2
USB1YLR132C URA2P07259 2214 aaKnown RBP2.52□□□□□ -2.01
USB1YLR132C SSO1P32867 290 aa2.52□□□□□ -2.01
USB1YLR132C YBR220CP38318 560 aa2.52□□□□□ -2.01
USB1YLR132C NSG1P38837 291 aa2.52□□□□□ -2.01
USB1YLR132C AYR1P40471 297 aa2.52□□□□□ -2.01
USB1YLR132C YIR020CP40575 100 aa2.52□□□□□ -2.01
USB1YLR132C FMP32P43557 207 aa2.52□□□□□ -2.01
USB1YLR132C HAM1P47119 197 aaKnown RBP2.52□□□□□ -2.01
USB1YLR132C RPS12P48589 143 aaKnown RBP2.52□□□□□ -2.01
USB1YLR132C YGL159WP53110 370 aa2.52□□□□□ -2.01
USB1YLR132C YNL046WP53956 172 aa2.52□□□□□ -2.01
USB1YLR132C SWP1Q02795 286 aa2.52□□□□□ -2.01
USB1YLR132C SML1Q04964 104 aa2.52□□□□□ -2.01
USB1YLR132C YDL180WQ12301 547 aa2.52□□□□□ -2.01
USB1YLR132C MATALPHA1P0CY06 175 aa2.51□□□□□ -2.01
USB1YLR132C HMLALPHA1P0CY07 175 aa2.51□□□□□ -2.01
USB1YLR132C MSA2P36157 363 aa2.51□□□□□ -2.01
USB1YLR132C PEP8P40335 379 aa2.51□□□□□ -2.01
USB1YLR132C YFR054CP43622 192 aa2.51□□□□□ -2.01
USB1YLR132C YJR146WP47174 117 aa2.51□□□□□ -2.01
USB1YLR132C SBH2P52871 88 aa2.51□□□□□ -2.01
USB1YLR132C NSA1P53136 463 aaPredicted RBP2.51□□□□□ -2.01
USB1YLR132C GTR2P53290 341 aa2.51□□□□□ -2.01
USB1YLR132C PRM15Q03262 622 aa2.51□□□□□ -2.01
USB1YLR132C SSQ1Q05931 657 aaPredicted RBP2.51□□□□□ -2.01
USB1YLR132C GRE1Q08969 168 aa2.51□□□□□ -2.01
USB1YLR132C YOR020W-AQ3E824 90 aa2.51□□□□□ -2.01
USB1YLR132C RHO1P06780 209 aaKnown RBP2.5□□□□□ -2.01
USB1YLR132C DSF1P0CX08 502 aa2.5□□□□□ -2.01
USB1YLR132C YNR073CP0CX09 502 aa2.5□□□□□ -2.01
USB1YLR132C KSS1P14681 368 aa2.5□□□□□ -2.01
USB1YLR132C NMT1P14743 455 aa2.5□□□□□ -2.01
USB1YLR132C RPO26P20435 155 aa2.5□□□□□ -2.01
USB1YLR132C SCO1P23833 295 aa2.5□□□□□ -2.01
USB1YLR132C CDC10P25342 322 aaKnown RBP2.5□□□□□ -2.01
USB1YLR132C VMA6P32366 345 aaKnown RBP2.5□□□□□ -2.01
USB1YLR132C VMA11P32842 164 aa2.5□□□□□ -2.01
USB1YLR132C YOR062CP36025 268 aa2.5□□□□□ -2.01
USB1YLR132C YHR125WP38831 101 aa2.5□□□□□ -2.01
USB1YLR132C SNX4P47057 423 aa2.5□□□□□ -2.01
USB1YLR132C MCM22P47167 239 aa2.5□□□□□ -2.01
USB1YLR132C COS6P53344 381 aa2.5□□□□□ -2.01
USB1YLR132C YLR036CQ07986 203 aa2.5□□□□□ -2.01
USB1YLR132C YOR283WQ12040 230 aaKnown RBP2.5□□□□□ -2.01
USB1YLR132C RIO1Q12196 484 aaKnown RBP2.5□□□□□ -2.01
USB1YLR132C RTR2Q12378 196 aa2.5□□□□□ -2.01
USB1YLR132C EMC6Q12431 108 aa2.5□□□□□ -2.01
USB1YLR132C Q0255P03881 472 aa2.49□□□□□ -2.01
USB1YLR132C PUT1P09368 476 aa2.49□□□□□ -2.01
USB1YLR132C ERD2P18414 219 aa2.49□□□□□ -2.01
USB1YLR132C BUB2P26448 306 aaPredicted RBP2.49□□□□□ -2.01
USB1YLR132C RFC4P40339 323 aaKnown RBP2.49□□□□□ -2.01
USB1YLR132C RPS5P26783 225 aaKnown RBP2.48□□□□□ -2.01
USB1YLR132C YAR068WP39564 161 aa2.48□□□□□ -2.01
USB1YLR132C CAT5P41735 233 aa2.48□□□□□ -2.01
USB1YLR132C GCN20P43535 752 aaKnown RBP2.48□□□□□ -2.01
USB1YLR132C SIP18P50263 79 aa2.48□□□□□ -2.01
USB1YLR132C SED1Q01589 338 aa2.48□□□□□ -2.01
USB1YLR132C ABF2Q02486 183 aa2.48□□□□□ -2.01
USB1YLR132C RCE1Q03530 315 aa2.48□□□□□ -2.01
USB1YLR132C YMD8Q03697 442 aa2.48□□□□□ -2.01
USB1YLR132C ATG39Q06159 398 aa2.48□□□□□ -2.01
USB1YLR132C HEM25Q07534 307 aa2.48□□□□□ -2.01
USB1YLR132C YPR202WQ08993 238 aa2.48□□□□□ -2.01
USB1YLR132C THP2O13539 261 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms