RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C SYG1P40528 902 aa8.49□□□□□ -1.05
SHM2YLR058C BNA1P47096 177 aa8.49□□□□□ -1.05
SHM2YLR058C PUS4P48567 403 aaKnown RBP8.49□□□□□ -1.05
SHM2YLR058C YGL258W-AQ3E740 77 aa8.49□□□□□ -1.05
SHM2YLR058C YER145C-AA0A023PYF4 145 aa8.48□□□□□ -1.05
SHM2YLR058C YBR085C-AO43137 85 aa8.48□□□□□ -1.05
SHM2YLR058C YCR025CP25352 136 aa8.48□□□□□ -1.05
SHM2YLR058C SIT1P39980 628 aa8.48□□□□□ -1.05
SHM2YLR058C NOP16P40007 231 aaKnown RBP8.48□□□□□ -1.05
SHM2YLR058C HCH1P53834 153 aa8.48□□□□□ -1.05
SHM2YLR058C DYN2Q02647 92 aa8.48□□□□□ -1.05
SHM2YLR058C DAL4Q04895 635 aa8.48□□□□□ -1.05
SHM2YLR058C RRP15Q06511 250 aaPredicted RBP8.48□□□□□ -1.05
SHM2YLR058C AGC1Q12482 902 aa8.48□□□□□ -1.05
SHM2YLR058C PIC2P40035 300 aa8.47□□□□□ -1.05
SHM2YLR058C COX15P40086 486 aa8.47□□□□□ -1.05
SHM2YLR058C DCS1Q06151 350 aa8.47□□□□□ -1.05
SHM2YLR058C PRR2Q12310 699 aa8.47□□□□□ -1.05
SHM2YLR058C JID1Q12350 301 aa8.47□□□□□ -1.05
SHM2YLR058C PHO85P17157 305 aa8.46□□□□□ -1.05
SHM2YLR058C YKR045CP36138 183 aa8.46□□□□□ -1.05
SHM2YLR058C YBR184WP38299 523 aa8.46□□□□□ -1.05
SHM2YLR058C PSD1P39006 500 aa8.46□□□□□ -1.05
SHM2YLR058C YMR166CQ03829 368 aa8.46□□□□□ -1.05
SHM2YLR058C USV1Q12132 391 aa8.46□□□□□ -1.05
SHM2YLR058C YPS3Q12303 508 aa8.46□□□□□ -1.05
SHM2YLR058C RPP1AP05318 106 aaPredicted RBP8.46□□□□□ -1.06
SHM2YLR058C FCY2P17064 533 aa8.46□□□□□ -1.06
SHM2YLR058C RAD23P32628 398 aaKnown RBP8.46□□□□□ -1.06
SHM2YLR058C UPS2P35200 230 aa8.46□□□□□ -1.06
SHM2YLR058C PHO23P50947 330 aa8.46□□□□□ -1.06
SHM2YLR058C UBC12P52491 188 aa8.46□□□□□ -1.06
SHM2YLR058C MCH1Q07376 486 aa8.46□□□□□ -1.06
SHM2YLR058C ATP14Q12349 124 aa8.46□□□□□ -1.06
SHM2YLR058C RPL15AP05748 204 aaKnown RBP8.45□□□□□ -1.06
SHM2YLR058C RTC3P38804 111 aaPredicted RBP8.45□□□□□ -1.06
SHM2YLR058C WSS1P38838 269 aa8.45□□□□□ -1.06
SHM2YLR058C NSA2P40078 261 aaKnown RBP8.45□□□□□ -1.06
SHM2YLR058C YJL213WP40896 331 aa8.45□□□□□ -1.06
SHM2YLR058C ERG25P53045 309 aa8.45□□□□□ -1.06
SHM2YLR058C SSU72P53538 206 aaPredicted RBP8.45□□□□□ -1.06
SHM2YLR058C RPL15BP54780 204 aaPredicted RBP8.45□□□□□ -1.06
SHM2YLR058C FRQ1Q06389 190 aa8.45□□□□□ -1.06
SHM2YLR058C TDA6Q06466 467 aa8.45□□□□□ -1.06
SHM2YLR058C POC4Q12245 148 aaPredicted RBP8.45□□□□□ -1.06
SHM2YLR058C TRP4P07285 380 aaPredicted RBP8.44□□□□□ -1.06
SHM2YLR058C SIP1P32578 815 aa8.44□□□□□ -1.06
SHM2YLR058C PRE3P38624 215 aa8.44□□□□□ -1.06
SHM2YLR058C EMC5P40540 141 aa8.44□□□□□ -1.06
SHM2YLR058C YFL054CP43549 646 aa8.44□□□□□ -1.06
SHM2YLR058C MRPS17Q03246 237 aaPredicted RBP8.44□□□□□ -1.06
SHM2YLR058C YOR097CQ12274 175 aaPredicted RBP8.44□□□□□ -1.06
SHM2YLR058C YDR157WA0A023PZE8 133 aa8.43□□□□□ -1.06
SHM2YLR058C SUA7P29055 345 aaPredicted RBP8.43□□□□□ -1.06
SHM2YLR058C LST8P41318 303 aa8.43□□□□□ -1.06
SHM2YLR058C YNR066CP53752 436 aa8.43□□□□□ -1.06
SHM2YLR058C NDE2Q07500 545 aa8.43□□□□□ -1.06
SHM2YLR058C YDL242WQ07746 117 aa8.43□□□□□ -1.06
SHM2YLR058C RPS25BP0C0T4 108 aaKnown RBP8.42□□□□□ -1.06
SHM2YLR058C MRS3P10566 314 aa8.42□□□□□ -1.06
SHM2YLR058C PEX7P39108 375 aa8.42□□□□□ -1.06
SHM2YLR058C YER188WP40103 239 aa8.42□□□□□ -1.06
SHM2YLR058C YGR269WP40326 108 aa8.42□□□□□ -1.06
SHM2YLR058C HXT14P42833 540 aa8.42□□□□□ -1.06
SHM2YLR058C YJL163CP46996 555 aa8.42□□□□□ -1.06
SHM2YLR058C YPL108WQ02872 168 aaPredicted RBP8.42□□□□□ -1.06
SHM2YLR058C YLR179CQ06252 201 aaKnown RBP8.42□□□□□ -1.06
SHM2YLR058C RPS25AQ3E792 108 aaPredicted RBP8.42□□□□□ -1.06
SHM2YLR058C SOD1P00445 154 aaKnown RBP8.41□□□□□ -1.06
SHM2YLR058C TOM40P23644 387 aaKnown RBP8.41□□□□□ -1.06
SHM2YLR058C WWM1P43582 211 aaKnown RBP8.41□□□□□ -1.06
SHM2YLR058C YCL001W-AP87012 153 aa8.41□□□□□ -1.06
SHM2YLR058C ORM2Q06144 216 aa8.41□□□□□ -1.06
SHM2YLR058C SRL1Q08673 210 aa8.41□□□□□ -1.06
SHM2YLR058C CCW14O13547 238 aa8.4□□□□□ -1.06
SHM2YLR058C ZRC1P20107 442 aa8.4□□□□□ -1.06
SHM2YLR058C YPT31P38555 223 aaKnown RBP8.4□□□□□ -1.06
SHM2YLR058C ADD37Q03233 198 aa8.4□□□□□ -1.06
SHM2YLR058C ELO2P25358 347 aa8.39□□□□□ -1.07
SHM2YLR058C AHT1P29589 182 aa8.39□□□□□ -1.07
SHM2YLR058C ODC1Q03028 310 aa8.39□□□□□ -1.07
SHM2YLR058C YOR015WQ12169 119 aa8.39□□□□□ -1.07
SHM2YLR058C RKI1Q12189 258 aa8.39□□□□□ -1.07
SHM2YLR058C YBR292CP38357 123 aa8.38□□□□□ -1.07
SHM2YLR058C YJR015WP47090 510 aa8.38□□□□□ -1.07
SHM2YLR058C SNN1P48232 102 aa8.38□□□□□ -1.07
SHM2YLR058C YHP1Q04116 353 aa8.38□□□□□ -1.07
SHM2YLR058C RAD28Q12021 506 aa8.38□□□□□ -1.07
SHM2YLR058C POM34Q12445 299 aa8.38□□□□□ -1.07
SHM2YLR058C SPO13P23624 291 aa8.37□□□□□ -1.07
SHM2YLR058C CDC50P25656 391 aa8.37□□□□□ -1.07
SHM2YLR058C QDR3P38227 689 aa8.37□□□□□ -1.07
SHM2YLR058C FLO5P38894 1075 aa8.37□□□□□ -1.07
SHM2YLR058C SPC25P40014 221 aa8.37□□□□□ -1.07
SHM2YLR058C GPP2P40106 250 aaKnown RBP8.37□□□□□ -1.07
SHM2YLR058C FMP41P53889 259 aaKnown RBP8.37□□□□□ -1.07
SHM2YLR058C ARR3Q06598 404 aa8.37□□□□□ -1.07
SHM2YLR058C COX19Q3E731 98 aa8.37□□□□□ -1.07
SHM2YLR058C FEN2P25621 512 aaKnown RBP8.37□□□□□ -1.07
SHM2YLR058C YAP1802P53309 568 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms