RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W ATP5P09457 212 aa4.37□□□□□ -1.71
PDE1YGL248W LDB16P25587 256 aa4.37□□□□□ -1.71
PDE1YGL248W IMP1P28627 190 aa4.37□□□□□ -1.71
PDE1YGL248W PEX4P29340 183 aa4.37□□□□□ -1.71
PDE1YGL248W LDS1P31379 325 aa4.37□□□□□ -1.71
PDE1YGL248W YKR070WP36151 352 aaKnown RBP4.37□□□□□ -1.71
PDE1YGL248W RPB11P38902 120 aa4.37□□□□□ -1.71
PDE1YGL248W GGC1P38988 300 aa4.37□□□□□ -1.71
PDE1YGL248W AVT2P39981 480 aa4.37□□□□□ -1.71
PDE1YGL248W PIR3Q03180 325 aa4.37□□□□□ -1.71
PDE1YGL248W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
PDE1YGL248W YLR042CQ07990 161 aa4.37□□□□□ -1.71
PDE1YGL248W SCP1Q08873 200 aa4.37□□□□□ -1.71
PDE1YGL248W HTL1Q9URQ5 78 aa4.37□□□□□ -1.71
PDE1YGL248W HSL1P34244 1518 aa4.36□□□□□ -1.71
PDE1YGL248W HHF1P02309 103 aaKnown RBP4.36□□□□□ -1.71
PDE1YGL248W CSE2P33308 149 aa4.36□□□□□ -1.71
PDE1YGL248W SMP1P38128 452 aa4.36□□□□□ -1.71
PDE1YGL248W TRS20P38334 175 aa4.36□□□□□ -1.71
PDE1YGL248W DIE2P50076 525 aa4.36□□□□□ -1.71
PDE1YGL248W FMP48P53233 369 aa4.36□□□□□ -1.71
PDE1YGL248W SCW10Q04951 389 aa4.36□□□□□ -1.71
PDE1YGL248W FMP42Q04991 504 aa4.36□□□□□ -1.71
PDE1YGL248W YLR179CQ06252 201 aaKnown RBP4.36□□□□□ -1.71
PDE1YGL248W YLR112WQ12130 139 aa4.36□□□□□ -1.71
PDE1YGL248W BSC1Q12140 328 aa4.36□□□□□ -1.71
PDE1YGL248W GTT2Q12390 233 aa4.36□□□□□ -1.71
PDE1YGL248W MET5P47169 1442 aa4.36□□□□□ -1.71
PDE1YGL248W SPT6P23615 1451 aaKnown RBP4.36□□□□□ -1.71
PDE1YGL248W REP2P03872 296 aa4.35□□□□□ -1.71
PDE1YGL248W MIX23P38162 196 aa4.35□□□□□ -1.71
PDE1YGL248W STB1P42845 420 aa4.35□□□□□ -1.71
PDE1YGL248W SNO3P43544 222 aa4.35□□□□□ -1.71
PDE1YGL248W SKI6P46948 246 aaPredicted RBP4.35□□□□□ -1.71
PDE1YGL248W GON7P46984 123 aa4.35□□□□□ -1.71
PDE1YGL248W YNR062CP53748 327 aa4.35□□□□□ -1.71
PDE1YGL248W GRH1Q04410 372 aaKnown RBP4.35□□□□□ -1.71
PDE1YGL248W TVP18Q04767 167 aa4.35□□□□□ -1.71
PDE1YGL248W UPS1Q05776 175 aa4.35□□□□□ -1.71
PDE1YGL248W YPL162CQ12042 273 aa4.35□□□□□ -1.71
PDE1YGL248W YCR075W-AQ3E830 75 aa4.35□□□□□ -1.71
PDE1YGL248W MMS22Q06164 1454 aa4.35□□□□□ -1.71
PDE1YGL248W XRN1P22147 1528 aaKnown RBP4.35□□□□□ -1.71
PDE1YGL248W RPS8AP0CX39 200 aaKnown RBP4.34□□□□□ -1.71
PDE1YGL248W RPS8BP0CX40 200 aaKnown RBP4.34□□□□□ -1.71
PDE1YGL248W SPT14P32363 452 aa4.34□□□□□ -1.71
PDE1YGL248W SKG1P36169 355 aa4.34□□□□□ -1.71
PDE1YGL248W YBL081WP38180 368 aaKnown RBP4.34□□□□□ -1.71
PDE1YGL248W PHO89P38361 574 aa4.34□□□□□ -1.71
PDE1YGL248W NSG1P38837 291 aa4.34□□□□□ -1.71
PDE1YGL248W YGL193CP53097 103 aa4.34□□□□□ -1.71
PDE1YGL248W YGR015CP53208 328 aa4.34□□□□□ -1.71
PDE1YGL248W SWT21P53873 357 aaPredicted RBP4.34□□□□□ -1.71
PDE1YGL248W BUD25P85052 153 aa4.34□□□□□ -1.71
PDE1YGL248W ELC1Q03071 99 aa4.34□□□□□ -1.71
PDE1YGL248W GAS3Q03655 524 aa4.34□□□□□ -1.71
PDE1YGL248W LPP1Q04396 274 aa4.34□□□□□ -1.71
PDE1YGL248W YHC1Q05900 231 aaKnown RBP4.34□□□□□ -1.71
PDE1YGL248W MCP1Q12106 302 aa4.34□□□□□ -1.71
PDE1YGL248W IZH2Q12442 317 aa4.34□□□□□ -1.71
PDE1YGL248W YFR032C-BQ8TGU2 87 aa4.34□□□□□ -1.71
PDE1YGL248W KRE5P22023 1365 aa4.34□□□□□ -1.71
PDE1YGL248W YIL177CP40434 1758 aa4.33□□□□□ -1.72
PDE1YGL248W YJL225CP40889 1758 aa4.33□□□□□ -1.72
PDE1YGL248W YER190C-BP0CX94 160 aa4.33□□□□□ -1.72
PDE1YGL248W YEL077W-AP0CX95 160 aa4.33□□□□□ -1.72
PDE1YGL248W YGR296C-BP0CX96 160 aa4.33□□□□□ -1.72
PDE1YGL248W YPL283W-BP0CX97 160 aa4.33□□□□□ -1.72
PDE1YGL248W YPR204C-AP0CX98 160 aa4.33□□□□□ -1.72
PDE1YGL248W MRS3P10566 314 aa4.33□□□□□ -1.72
PDE1YGL248W SPT15P13393 240 aaKnown RBP4.33□□□□□ -1.72
PDE1YGL248W UBC5P15732 148 aa4.33□□□□□ -1.72
PDE1YGL248W CDC43P18898 376 aa4.33□□□□□ -1.72
PDE1YGL248W YCR025CP25352 136 aa4.33□□□□□ -1.72
PDE1YGL248W ERG2P32352 222 aa4.33□□□□□ -1.72
PDE1YGL248W RPL14AP36105 138 aaKnown RBP4.33□□□□□ -1.72
PDE1YGL248W ECM31P38122 312 aa4.33□□□□□ -1.72
PDE1YGL248W RPL14BP38754 138 aaKnown RBP4.33□□□□□ -1.72
PDE1YGL248W CLD1P53264 445 aa4.33□□□□□ -1.72
PDE1YGL248W YDL211CQ12121 372 aa4.33□□□□□ -1.72
PDE1YGL248W YOR020W-AQ3E824 90 aa4.33□□□□□ -1.72
PDE1YGL248W TY1B-HO13535 1793 aa4.32□□□□□ -1.72
PDE1YGL248W MYO2P19524 1574 aaKnown RBP4.32□□□□□ -1.72
PDE1YGL248W SNU13P39990 126 aaKnown RBP4.32□□□□□ -1.72
PDE1YGL248W IRC22P40006 225 aa4.32□□□□□ -1.72
PDE1YGL248W GTT1P40582 234 aa4.32□□□□□ -1.72
PDE1YGL248W GNA1P43577 159 aaPredicted RBP4.32□□□□□ -1.72
PDE1YGL248W YLR111WQ12528 110 aa4.32□□□□□ -1.72
PDE1YGL248W YGL194C-AQ2V2P6 80 aa4.32□□□□□ -1.72
PDE1YGL248W RSF2P46974 1380 aa4.31□□□□□ -1.72
PDE1YGL248W YCR022CP25620 114 aa4.31□□□□□ -1.72
PDE1YGL248W AHT1P29589 182 aa4.31□□□□□ -1.72
PDE1YGL248W YRA2P36036 203 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
PDE1YGL248W UTP30P36144 274 aaKnown RBP4.31□□□□□ -1.72
PDE1YGL248W YIL012WP40551 113 aa4.31□□□□□ -1.72
PDE1YGL248W YGL262WP53054 175 aa4.31□□□□□ -1.72
PDE1YGL248W YPR011CQ12251 326 aa4.31□□□□□ -1.72
PDE1YGL248W THO2P53552 1597 aaKnown RBP4.31□□□□□ -1.72
PDE1YGL248W SIN3P22579 1536 aa4.31□□□□□ -1.72
PDE1YGL248W RPO31P04051 1460 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms