RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	CUS2	P53830	285 aa	Predicted RBP	2.79	□□□□□ -1.96
TRM1	YDR120C	YDR476C	Q03362	224 aa		2.79	□□□□□ -1.96
TRM1	YDR120C	RNH1	Q04740	348 aa		2.79	□□□□□ -1.96
TRM1	YDR120C	YOR268C	Q08734	132 aa		2.79	□□□□□ -1.96
TRM1	YDR120C	MATALPHA1	P0CY06	175 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	HMLALPHA1	P0CY07	175 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	KSS1	P14681	368 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	MDH2	P22133	377 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	YKL075C	P36083	450 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	YHL037C	P38733	133 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	TIM11	P81449	96 aa	Predicted RBP	2.78	□□□□□ -1.96
TRM1	YDR120C	SYC1	Q08553	188 aa	Predicted RBP	2.78	□□□□□ -1.96
TRM1	YDR120C	YOR214C	Q12282	236 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	YDL180W	Q12301	547 aa		2.78	□□□□□ -1.96
TRM1	YDR120C	PTC1	P35182	281 aa		2.77	□□□□□ -1.97
TRM1	YDR120C	YFR054C	P43622	192 aa		2.77	□□□□□ -1.97
TRM1	YDR120C	SYF2	P53277	215 aa	Predicted RBP	2.77	□□□□□ -1.97
TRM1	YDR120C	COS6	P53344	381 aa		2.77	□□□□□ -1.97
TRM1	YDR120C	FAR8	Q05040	523 aa		2.77	□□□□□ -1.97
TRM1	YDR120C	JLP1	Q12358	412 aa		2.77	□□□□□ -1.97
TRM1	YDR120C	RPC19	P28000	142 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	YBR220C	P38318	560 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	SSH1	P38353	490 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	YHR180W	P38868	163 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	YFL051C	P43552	160 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	ATG38	Q05789	226 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	YOR186W	Q08560	144 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	MHF1	Q3E835	90 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	CCW14	O13547	238 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	RHO1	P06780	209 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	RPL35A	P0CX84	120 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	RPL35B	P0CX85	120 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	MER1	P16523	270 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	COG3	P40094	801 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	RIO2	P40160	425 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	PRE6	P40303	254 aa	Known RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	SSQ1	Q05931	657 aa	Predicted RBP	2.76	□□□□□ -1.97
TRM1	YDR120C	SPO77	Q06134	477 aa		2.76	□□□□□ -1.97
TRM1	YDR120C	SEC22	P22214	214 aa		2.75	□□□□□ -1.97
TRM1	YDR120C	YKR032W	P36127	104 aa		2.75	□□□□□ -1.97
TRM1	YDR120C	MRPL17	P36528	281 aa		2.75	□□□□□ -1.97
TRM1	YDR120C	RGI1	P40043	161 aa	Predicted RBP	2.75	□□□□□ -1.97
TRM1	YDR120C	RFC4	P40339	323 aa	Known RBP	2.75	□□□□□ -1.97
TRM1	YDR120C	GON7	P46984	123 aa		2.75	□□□□□ -1.97
TRM1	YDR120C	ADO1	P47143	340 aa	Known RBP	2.75	□□□□□ -1.97
TRM1	YDR120C	SSU72	P53538	206 aa	Predicted RBP	2.75	□□□□□ -1.97
TRM1	YDR120C	YNL046W	P53956	172 aa		2.75	□□□□□ -1.97
TRM1	YDR120C	IRC19	Q07843	230 aa		2.75	□□□□□ -1.97
TRM1	YDR120C	MCP1	Q12106	302 aa		2.75	□□□□□ -1.97
TRM1	YDR120C	SGA1	P08019	549 aa		2.74	□□□□□ -1.97
TRM1	YDR120C	SCO1	P23833	295 aa		2.74	□□□□□ -1.97
TRM1	YDR120C	YBR032W	P38223	100 aa		2.74	□□□□□ -1.97
TRM1	YDR120C	YER188W	P40103	239 aa		2.74	□□□□□ -1.97
TRM1	YDR120C	YLR179C	Q06252	201 aa	Known RBP	2.74	□□□□□ -1.97
TRM1	YDR120C	BRX1	Q08235	291 aa	Known RBP	2.74	□□□□□ -1.97
TRM1	YDR120C	YOL131W	Q08270	108 aa		2.74	□□□□□ -1.97
TRM1	YDR120C	GRE1	Q08969	168 aa		2.74	□□□□□ -1.97
TRM1	YDR120C	DPM1	P14020	267 aa	Known RBP	2.73	□□□□□ -1.97
TRM1	YDR120C	ERD2	P18414	219 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	RPS1B	P23248	255 aa	Known RBP	2.73	□□□□□ -1.97
TRM1	YDR120C	DIA1	P54005	336 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	RCE1	Q03530	315 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	YLR126C	Q12288	251 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	YKL018C-A	Q3E7A7	99 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	THP2	O13539	261 aa	Known RBP	2.73	□□□□□ -1.97
TRM1	YDR120C	CCA1	P21269	546 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	LHP1	P33399	275 aa	Known RBP	2.73	□□□□□ -1.97
TRM1	YDR120C	GCN20	P43535	752 aa	Known RBP	2.73	□□□□□ -1.97
TRM1	YDR120C	OTU1	P43558	301 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	SIP18	P50263	79 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	SBH2	P52871	88 aa		2.73	□□□□□ -1.97
TRM1	YDR120C	NIP7	Q08962	181 aa	Known RBP	2.73	□□□□□ -1.97
TRM1	YDR120C	HSP30	P25619	332 aa		2.72	□□□□□ -1.97
TRM1	YDR120C	CUE1	P38428	203 aa		2.72	□□□□□ -1.97
TRM1	YDR120C	YER121W	P40076	114 aa		2.72	□□□□□ -1.97
TRM1	YDR120C	CAB4	P53332	305 aa		2.72	□□□□□ -1.97
TRM1	YDR120C	GRH1	Q04410	372 aa	Known RBP	2.72	□□□□□ -1.97
TRM1	YDR120C	YIR020C	P40575	100 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	YGR201C	P42936	225 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	TLG1	Q03322	224 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	NSL1	Q12143	216 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	YPL229W	Q99395	206 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	RPL26A	P05743	127 aa	Known RBP	2.71	□□□□□ -1.98
TRM1	YDR120C	DBF2	P22204	572 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	RCN1	P36054	211 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	NUP57	P48837	541 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	RPL26B	P53221	127 aa	Known RBP	2.71	□□□□□ -1.98
TRM1	YDR120C	SED1	Q01589	338 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	MSA1	Q08471	629 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	RTR2	Q12378	196 aa		2.71	□□□□□ -1.98
TRM1	YDR120C	YPK2	P18961	677 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	RPL24B	P24000	155 aa	Known RBP	2.7	□□□□□ -1.98
TRM1	YDR120C	VMA6	P32366	345 aa	Known RBP	2.7	□□□□□ -1.98
TRM1	YDR120C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
TRM1	YDR120C	TIM12	P32830	109 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	CLB6	P32943	380 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	NTF2	P33331	125 aa	Known RBP	2.7	□□□□□ -1.98
TRM1	YDR120C	NUF2	P33895	451 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	MSS2	P40990	351 aa		2.7	□□□□□ -1.98
TRM1	YDR120C	OST2	P46964	130 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms