RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C CUS2P53830 285 aaPredicted RBP2.79□□□□□ -1.96
TRM1YDR120C YDR476CQ03362 224 aa2.79□□□□□ -1.96
TRM1YDR120C RNH1Q04740 348 aa2.79□□□□□ -1.96
TRM1YDR120C YOR268CQ08734 132 aa2.79□□□□□ -1.96
TRM1YDR120C MATALPHA1P0CY06 175 aa2.78□□□□□ -1.96
TRM1YDR120C HMLALPHA1P0CY07 175 aa2.78□□□□□ -1.96
TRM1YDR120C KSS1P14681 368 aa2.78□□□□□ -1.96
TRM1YDR120C MDH2P22133 377 aa2.78□□□□□ -1.96
TRM1YDR120C YKL075CP36083 450 aa2.78□□□□□ -1.96
TRM1YDR120C YHL037CP38733 133 aa2.78□□□□□ -1.96
TRM1YDR120C TIM11P81449 96 aaPredicted RBP2.78□□□□□ -1.96
TRM1YDR120C SYC1Q08553 188 aaPredicted RBP2.78□□□□□ -1.96
TRM1YDR120C YOR214CQ12282 236 aa2.78□□□□□ -1.96
TRM1YDR120C YDL180WQ12301 547 aa2.78□□□□□ -1.96
TRM1YDR120C PTC1P35182 281 aa2.77□□□□□ -1.97
TRM1YDR120C YFR054CP43622 192 aa2.77□□□□□ -1.97
TRM1YDR120C SYF2P53277 215 aaPredicted RBP2.77□□□□□ -1.97
TRM1YDR120C COS6P53344 381 aa2.77□□□□□ -1.97
TRM1YDR120C FAR8Q05040 523 aa2.77□□□□□ -1.97
TRM1YDR120C JLP1Q12358 412 aa2.77□□□□□ -1.97
TRM1YDR120C RPC19P28000 142 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C YBR220CP38318 560 aa2.76□□□□□ -1.97
TRM1YDR120C SSH1P38353 490 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C YHR180WP38868 163 aa2.76□□□□□ -1.97
TRM1YDR120C YFL051CP43552 160 aa2.76□□□□□ -1.97
TRM1YDR120C ATG38Q05789 226 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C YOR186WQ08560 144 aa2.76□□□□□ -1.97
TRM1YDR120C MHF1Q3E835 90 aa2.76□□□□□ -1.97
TRM1YDR120C CCW14O13547 238 aa2.76□□□□□ -1.97
TRM1YDR120C RHO1P06780 209 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C RPL35AP0CX84 120 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C RPL35BP0CX85 120 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C MER1P16523 270 aa2.76□□□□□ -1.97
TRM1YDR120C COG3P40094 801 aa2.76□□□□□ -1.97
TRM1YDR120C RIO2P40160 425 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C PRE6P40303 254 aaKnown RBP2.76□□□□□ -1.97
TRM1YDR120C SSQ1Q05931 657 aaPredicted RBP2.76□□□□□ -1.97
TRM1YDR120C SPO77Q06134 477 aa2.76□□□□□ -1.97
TRM1YDR120C SEC22P22214 214 aa2.75□□□□□ -1.97
TRM1YDR120C YKR032WP36127 104 aa2.75□□□□□ -1.97
TRM1YDR120C MRPL17P36528 281 aa2.75□□□□□ -1.97
TRM1YDR120C RGI1P40043 161 aaPredicted RBP2.75□□□□□ -1.97
TRM1YDR120C RFC4P40339 323 aaKnown RBP2.75□□□□□ -1.97
TRM1YDR120C GON7P46984 123 aa2.75□□□□□ -1.97
TRM1YDR120C ADO1P47143 340 aaKnown RBP2.75□□□□□ -1.97
TRM1YDR120C SSU72P53538 206 aaPredicted RBP2.75□□□□□ -1.97
TRM1YDR120C YNL046WP53956 172 aa2.75□□□□□ -1.97
TRM1YDR120C IRC19Q07843 230 aa2.75□□□□□ -1.97
TRM1YDR120C MCP1Q12106 302 aa2.75□□□□□ -1.97
TRM1YDR120C SGA1P08019 549 aa2.74□□□□□ -1.97
TRM1YDR120C SCO1P23833 295 aa2.74□□□□□ -1.97
TRM1YDR120C YBR032WP38223 100 aa2.74□□□□□ -1.97
TRM1YDR120C YER188WP40103 239 aa2.74□□□□□ -1.97
TRM1YDR120C YLR179CQ06252 201 aaKnown RBP2.74□□□□□ -1.97
TRM1YDR120C BRX1Q08235 291 aaKnown RBP2.74□□□□□ -1.97
TRM1YDR120C YOL131WQ08270 108 aa2.74□□□□□ -1.97
TRM1YDR120C GRE1Q08969 168 aa2.74□□□□□ -1.97
TRM1YDR120C DPM1P14020 267 aaKnown RBP2.73□□□□□ -1.97
TRM1YDR120C ERD2P18414 219 aa2.73□□□□□ -1.97
TRM1YDR120C RPS1BP23248 255 aaKnown RBP2.73□□□□□ -1.97
TRM1YDR120C DIA1P54005 336 aa2.73□□□□□ -1.97
TRM1YDR120C RCE1Q03530 315 aa2.73□□□□□ -1.97
TRM1YDR120C YLR126CQ12288 251 aa2.73□□□□□ -1.97
TRM1YDR120C YKL018C-AQ3E7A7 99 aa2.73□□□□□ -1.97
TRM1YDR120C THP2O13539 261 aaKnown RBP2.73□□□□□ -1.97
TRM1YDR120C CCA1P21269 546 aa2.73□□□□□ -1.97
TRM1YDR120C LHP1P33399 275 aaKnown RBP2.73□□□□□ -1.97
TRM1YDR120C GCN20P43535 752 aaKnown RBP2.73□□□□□ -1.97
TRM1YDR120C OTU1P43558 301 aa2.73□□□□□ -1.97
TRM1YDR120C SIP18P50263 79 aa2.73□□□□□ -1.97
TRM1YDR120C SBH2P52871 88 aa2.73□□□□□ -1.97
TRM1YDR120C NIP7Q08962 181 aaKnown RBP2.73□□□□□ -1.97
TRM1YDR120C HSP30P25619 332 aa2.72□□□□□ -1.97
TRM1YDR120C CUE1P38428 203 aa2.72□□□□□ -1.97
TRM1YDR120C YER121WP40076 114 aa2.72□□□□□ -1.97
TRM1YDR120C CAB4P53332 305 aa2.72□□□□□ -1.97
TRM1YDR120C GRH1Q04410 372 aaKnown RBP2.72□□□□□ -1.97
TRM1YDR120C YIR020CP40575 100 aa2.71□□□□□ -1.98
TRM1YDR120C YGR201CP42936 225 aa2.71□□□□□ -1.98
TRM1YDR120C TLG1Q03322 224 aa2.71□□□□□ -1.98
TRM1YDR120C NSL1Q12143 216 aa2.71□□□□□ -1.98
TRM1YDR120C YPL229WQ99395 206 aa2.71□□□□□ -1.98
TRM1YDR120C RPL26AP05743 127 aaKnown RBP2.71□□□□□ -1.98
TRM1YDR120C DBF2P22204 572 aa2.71□□□□□ -1.98
TRM1YDR120C RCN1P36054 211 aa2.71□□□□□ -1.98
TRM1YDR120C NUP57P48837 541 aa2.71□□□□□ -1.98
TRM1YDR120C RPL26BP53221 127 aaKnown RBP2.71□□□□□ -1.98
TRM1YDR120C SED1Q01589 338 aa2.71□□□□□ -1.98
TRM1YDR120C MSA1Q08471 629 aa2.71□□□□□ -1.98
TRM1YDR120C RTR2Q12378 196 aa2.71□□□□□ -1.98
TRM1YDR120C YPK2P18961 677 aa2.7□□□□□ -1.98
TRM1YDR120C RPL24BP24000 155 aaKnown RBP2.7□□□□□ -1.98
TRM1YDR120C VMA6P32366 345 aaKnown RBP2.7□□□□□ -1.98
TRM1YDR120C MDH3P32419 343 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
TRM1YDR120C TIM12P32830 109 aa2.7□□□□□ -1.98
TRM1YDR120C CLB6P32943 380 aa2.7□□□□□ -1.98
TRM1YDR120C NTF2P33331 125 aaKnown RBP2.7□□□□□ -1.98
TRM1YDR120C NUF2P33895 451 aa2.7□□□□□ -1.98
TRM1YDR120C MSS2P40990 351 aa2.7□□□□□ -1.98
TRM1YDR120C OST2P46964 130 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms