RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W CSH1P38287 376 aa4.8□□□□□ -1.64
VMS1YDR049W COX14P39103 70 aa4.8□□□□□ -1.64
VMS1YDR049W ARP3P47117 449 aaKnown RBP4.8□□□□□ -1.64
VMS1YDR049W FMP41P53889 259 aaKnown RBP4.8□□□□□ -1.64
VMS1YDR049W MIM1Q08176 113 aa4.8□□□□□ -1.64
VMS1YDR049W RDL1Q12305 139 aaKnown RBP4.8□□□□□ -1.64
VMS1YDR049W YER039C-AP0CD97 72 aa4.79□□□□□ -1.64
VMS1YDR049W PTC1P35182 281 aa4.79□□□□□ -1.64
VMS1YDR049W LCB3P47013 409 aa4.79□□□□□ -1.64
VMS1YDR049W LSM8P47093 109 aaKnown RBP4.79□□□□□ -1.64
VMS1YDR049W AAH1P53909 347 aa4.79□□□□□ -1.64
VMS1YDR049W YOR292CQ08743 309 aa4.79□□□□□ -1.64
VMS1YDR049W EAF3Q12432 401 aa4.79□□□□□ -1.64
VMS1YDR049W YNL277W-AQ3E7Z0 62 aa4.79□□□□□ -1.64
VMS1YDR049W YPR014CQ6B0W2 109 aa4.79□□□□□ -1.64
VMS1YDR049W CYC7P00045 113 aa4.79□□□□□ -1.64
VMS1YDR049W HRR25P29295 494 aaKnown RBP4.79□□□□□ -1.64
VMS1YDR049W AVT7P40501 490 aa4.79□□□□□ -1.64
VMS1YDR049W TMA10Q06177 86 aa4.79□□□□□ -1.64
VMS1YDR049W MCA1Q08601 432 aa4.79□□□□□ -1.64
VMS1YDR049W TIR4Q12218 487 aaPredicted RBP4.79□□□□□ -1.64
VMS1YDR049W YDR215CQ12240 137 aa4.79□□□□□ -1.64
VMS1YDR049W BOL1Q3E793 110 aa4.79□□□□□ -1.64
VMS1YDR049W SRL3P36167 246 aa4.78□□□□□ -1.64
VMS1YDR049W DAD3P69850 94 aa4.78□□□□□ -1.64
VMS1YDR049W CSR2Q12734 1121 aa4.78□□□□□ -1.64
VMS1YDR049W SPS2P08459 502 aa4.77□□□□□ -1.65
VMS1YDR049W RPS18AP0CX55 146 aaKnown RBP4.77□□□□□ -1.65
VMS1YDR049W RPS18BP0CX56 146 aaPredicted RBP4.77□□□□□ -1.65
VMS1YDR049W TIR1P10863 254 aa4.77□□□□□ -1.65
VMS1YDR049W CKS1P20486 150 aaKnown RBP4.77□□□□□ -1.65
VMS1YDR049W SEC17P32602 292 aa4.77□□□□□ -1.65
VMS1YDR049W TIF34P40217 347 aaKnown RBP4.77□□□□□ -1.65
VMS1YDR049W CAT5P41735 233 aa4.77□□□□□ -1.65
VMS1YDR049W SFT1P43682 97 aa4.77□□□□□ -1.65
VMS1YDR049W VPS28Q02767 242 aa4.77□□□□□ -1.65
VMS1YDR049W BSC1Q12140 328 aa4.77□□□□□ -1.65
VMS1YDR049W USO1P25386 1790 aa4.77□□□□□ -1.65
VMS1YDR049W Q0255P03881 472 aa4.77□□□□□ -1.65
VMS1YDR049W RPL15AP05748 204 aaKnown RBP4.77□□□□□ -1.65
VMS1YDR049W URA10P30402 227 aa4.77□□□□□ -1.65
VMS1YDR049W TKL2P33315 681 aa4.77□□□□□ -1.65
VMS1YDR049W COS10P52924 374 aa4.77□□□□□ -1.65
VMS1YDR049W SCS3P53012 380 aa4.77□□□□□ -1.65
VMS1YDR049W YGL088WP53151 121 aa4.77□□□□□ -1.65
VMS1YDR049W YGL082WP53155 381 aa4.77□□□□□ -1.65
VMS1YDR049W RPL15BP54780 204 aaPredicted RBP4.77□□□□□ -1.65
VMS1YDR049W SPC3Q12133 184 aa4.77□□□□□ -1.65
VMS1YDR049W RPN13O13563 156 aa4.76□□□□□ -1.65
VMS1YDR049W YCR025CP25352 136 aa4.76□□□□□ -1.65
VMS1YDR049W FIP1P45976 327 aa4.76□□□□□ -1.65
VMS1YDR049W VPS25P47142 202 aa4.76□□□□□ -1.65
VMS1YDR049W FMP48P53233 369 aa4.76□□□□□ -1.65
VMS1YDR049W ALG9P53868 555 aaKnown RBP4.76□□□□□ -1.65
VMS1YDR049W APJ1P53940 528 aa4.76□□□□□ -1.65
VMS1YDR049W YKR005CQ02203 525 aa4.76□□□□□ -1.65
VMS1YDR049W YPL034WQ03083 165 aa4.76□□□□□ -1.65
VMS1YDR049W YMR099CQ03161 297 aaKnown RBP4.76□□□□□ -1.65
VMS1YDR049W CCA1P21269 546 aa4.75□□□□□ -1.65
VMS1YDR049W SRP21P32342 167 aa4.75□□□□□ -1.65
VMS1YDR049W RNP1P32385 249 aa4.75□□□□□ -1.65
VMS1YDR049W EDC2P40023 145 aaPredicted RBP4.75□□□□□ -1.65
VMS1YDR049W PRE5P40302 234 aaKnown RBP4.75□□□□□ -1.65
VMS1YDR049W HYR1P40581 163 aaKnown RBP4.75□□□□□ -1.65
VMS1YDR049W TTI2P47168 421 aa4.75□□□□□ -1.65
VMS1YDR049W TDA7P53882 636 aaPredicted RBP4.75□□□□□ -1.65
VMS1YDR049W VHS1Q03785 461 aa4.75□□□□□ -1.65
VMS1YDR049W YBL008W-AQ3E821 79 aa4.75□□□□□ -1.65
VMS1YDR049W RPS13P05756 151 aaKnown RBP4.75□□□□□ -1.65
VMS1YDR049W LDB16P25587 256 aa4.75□□□□□ -1.65
VMS1YDR049W YBR063CP38083 404 aa4.75□□□□□ -1.65
VMS1YDR049W YBL081WP38180 368 aaKnown RBP4.75□□□□□ -1.65
VMS1YDR049W TIM17P39515 158 aa4.75□□□□□ -1.65
VMS1YDR049W PHO23P50947 330 aa4.75□□□□□ -1.65
VMS1YDR049W YNL033WP53964 284 aa4.75□□□□□ -1.65
VMS1YDR049W YNL019CP53975 284 aa4.75□□□□□ -1.65
VMS1YDR049W YPS3Q12303 508 aa4.75□□□□□ -1.65
VMS1YDR049W LYS2P07702 1392 aa4.74□□□□□ -1.65
VMS1YDR049W MRS3P10566 314 aa4.74□□□□□ -1.65
VMS1YDR049W ATS1P31386 333 aa4.74□□□□□ -1.65
VMS1YDR049W SIP2P34164 415 aaKnown RBP4.74□□□□□ -1.65
VMS1YDR049W YKR070WP36151 352 aaKnown RBP4.74□□□□□ -1.65
VMS1YDR049W PIR3Q03180 325 aa4.74□□□□□ -1.65
VMS1YDR049W YHC1Q05900 231 aaKnown RBP4.74□□□□□ -1.65
VMS1YDR049W OCA6Q12454 224 aa4.74□□□□□ -1.65
VMS1YDR049W YLR111WQ12528 110 aa4.74□□□□□ -1.65
VMS1YDR049W SAS5Q99314 248 aa4.74□□□□□ -1.65
VMS1YDR049W YIL177CP40434 1758 aa4.74□□□□□ -1.65
VMS1YDR049W YJL225CP40889 1758 aa4.74□□□□□ -1.65
VMS1YDR049W FMP46P36141 133 aaKnown RBP4.73□□□□□ -1.65
VMS1YDR049W YHR140WP38842 239 aa4.73□□□□□ -1.65
VMS1YDR049W GGC1P38988 300 aa4.73□□□□□ -1.65
VMS1YDR049W GPI2P46961 280 aa4.73□□□□□ -1.65
VMS1YDR049W RPE1P46969 238 aa4.73□□□□□ -1.65
VMS1YDR049W SDS23P53172 527 aa4.73□□□□□ -1.65
VMS1YDR049W YPL278CQ08990 100 aa4.73□□□□□ -1.65
VMS1YDR049W GLT1Q12680 2145 aaKnown RBP4.73□□□□□ -1.65
VMS1YDR049W ANB1P19211 157 aa4.73□□□□□ -1.65
VMS1YDR049W YCR022CP25620 114 aa4.73□□□□□ -1.65
VMS1YDR049W SHB17P36136 271 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms