RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C RPS25AQ3E792 108 aaPredicted RBP3.57□□□□□ -1.84
BRE4YDL231C TY1A-LR4P0C2I8 440 aaKnown RBP3.57□□□□□ -1.84
BRE4YDL231C TY1A-DR6P0CX70 440 aa3.57□□□□□ -1.84
BRE4YDL231C TY1A-ER1P0CX71 440 aa3.57□□□□□ -1.84
BRE4YDL231C TY1A-LR2P0CX72 440 aa3.57□□□□□ -1.84
BRE4YDL231C TY1A-PLP0CX73 440 aa3.57□□□□□ -1.84
BRE4YDL231C TY1A-JR1P0CX74 440 aa3.57□□□□□ -1.84
BRE4YDL231C TY1A-LR3P0CX75 440 aa3.57□□□□□ -1.84
BRE4YDL231C TY1A-ML2P0CX76 440 aa3.57□□□□□ -1.84
BRE4YDL231C YNK1P36010 153 aaKnown RBP3.57□□□□□ -1.84
BRE4YDL231C PHD1P36093 366 aa3.57□□□□□ -1.84
BRE4YDL231C XBP1P40489 647 aa3.57□□□□□ -1.84
BRE4YDL231C TTI2P47168 421 aa3.57□□□□□ -1.84
BRE4YDL231C ODC1Q03028 310 aa3.57□□□□□ -1.84
BRE4YDL231C FSH2Q05015 223 aa3.57□□□□□ -1.84
BRE4YDL231C TY1A-GR1Q12085 440 aa3.57□□□□□ -1.84
BRE4YDL231C USV1Q12132 391 aa3.57□□□□□ -1.84
BRE4YDL231C MPD1Q12404 318 aaKnown RBP3.57□□□□□ -1.84
BRE4YDL231C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.57□□□□□ -1.84
BRE4YDL231C TY1A-OLQ92392 440 aaKnown RBP3.57□□□□□ -1.84
BRE4YDL231C FRS1P15624 595 aaKnown RBP3.57□□□□□ -1.84
BRE4YDL231C COX16P47081 118 aa3.57□□□□□ -1.84
BRE4YDL231C MSO1P53604 210 aaKnown RBP3.57□□□□□ -1.84
BRE4YDL231C YNR066CP53752 436 aa3.57□□□□□ -1.84
BRE4YDL231C CAF40P53829 373 aa3.57□□□□□ -1.84
BRE4YDL231C DYN2Q02647 92 aa3.57□□□□□ -1.84
BRE4YDL231C YHP1Q04116 353 aa3.57□□□□□ -1.84
BRE4YDL231C NAT3Q06504 195 aa3.57□□□□□ -1.84
BRE4YDL231C SHB17P36136 271 aaKnown RBP3.56□□□□□ -1.84
BRE4YDL231C GON7P46984 123 aa3.56□□□□□ -1.84
BRE4YDL231C PDR17P53844 350 aa3.56□□□□□ -1.84
BRE4YDL231C RFU1Q08003 200 aa3.56□□□□□ -1.84
BRE4YDL231C MET32Q12041 191 aa3.56□□□□□ -1.84
BRE4YDL231C PAA1Q12447 191 aaKnown RBP3.56□□□□□ -1.84
BRE4YDL231C NUM1Q00402 2748 aa3.56□□□□□ -1.84
BRE4YDL231C ECM31P38122 312 aa3.56□□□□□ -1.84
BRE4YDL231C RPA34P47006 233 aaPredicted RBP3.56□□□□□ -1.84
BRE4YDL231C YNR064CP53750 290 aa3.56□□□□□ -1.84
BRE4YDL231C ZEO1Q08245 113 aa3.56□□□□□ -1.84
BRE4YDL231C TMC1Q08422 150 aaPredicted RBP3.56□□□□□ -1.84
BRE4YDL231C FCY1Q12178 158 aa3.56□□□□□ -1.84
BRE4YDL231C POC4Q12245 148 aaPredicted RBP3.56□□□□□ -1.84
BRE4YDL231C YMR316C-AI2HB70 103 aa3.55□□□□□ -1.84
BRE4YDL231C REC104P33323 182 aa3.55□□□□□ -1.84
BRE4YDL231C YGP1P38616 354 aaKnown RBP3.55□□□□□ -1.84
BRE4YDL231C YHR138CP38841 114 aaPredicted RBP3.55□□□□□ -1.84
BRE4YDL231C HXT14P42833 540 aa3.55□□□□□ -1.84
BRE4YDL231C YFL051CP43552 160 aa3.55□□□□□ -1.84
BRE4YDL231C HIT1P46973 164 aa3.55□□□□□ -1.84
BRE4YDL231C UBC12P52491 188 aa3.55□□□□□ -1.84
BRE4YDL231C YGR151CP53287 111 aa3.55□□□□□ -1.84
BRE4YDL231C FMP41P53889 259 aaKnown RBP3.55□□□□□ -1.84
BRE4YDL231C YPD1Q07688 167 aa3.55□□□□□ -1.84
BRE4YDL231C YLR302CO13544 120 aa3.55□□□□□ -1.84
BRE4YDL231C MIR1P23641 311 aaKnown RBP3.55□□□□□ -1.84
BRE4YDL231C LSB5P25369 354 aa3.55□□□□□ -1.84
BRE4YDL231C YMR279CQ03263 540 aa3.55□□□□□ -1.84
BRE4YDL231C YDL242WQ07746 117 aa3.55□□□□□ -1.84
BRE4YDL231C YOR029WQ12243 111 aa3.55□□□□□ -1.84
BRE4YDL231C MRS3P10566 314 aa3.55□□□□□ -1.84
BRE4YDL231C MRP2P10663 115 aaPredicted RBP3.55□□□□□ -1.84
BRE4YDL231C RAD23P32628 398 aaKnown RBP3.55□□□□□ -1.84
BRE4YDL231C EMP24P32803 203 aaKnown RBP3.55□□□□□ -1.84
BRE4YDL231C CDS1P38221 457 aa3.55□□□□□ -1.84
BRE4YDL231C PEX7P39108 375 aa3.55□□□□□ -1.84
BRE4YDL231C YJR015WP47090 510 aa3.55□□□□□ -1.84
BRE4YDL231C PEF1P53238 335 aa3.55□□□□□ -1.84
BRE4YDL231C DAD3P69850 94 aa3.55□□□□□ -1.84
BRE4YDL231C YCL048W-AQ2V2Q2 79 aa3.55□□□□□ -1.84
BRE4YDL231C YIF1P53845 314 aaKnown RBP3.54□□□□□ -1.84
BRE4YDL231C YCL001W-AP87012 153 aa3.54□□□□□ -1.84
BRE4YDL231C POM34Q12445 299 aa3.54□□□□□ -1.84
BRE4YDL231C YPR108W-AQ3E7B3 70 aa3.54□□□□□ -1.84
BRE4YDL231C COA2Q3E823 68 aa3.54□□□□□ -1.84
BRE4YDL231C RIP1P08067 215 aa3.54□□□□□ -1.84
BRE4YDL231C NOP1P15646 327 aaKnown RBP3.54□□□□□ -1.84
BRE4YDL231C YKL162CP36052 402 aa3.54□□□□□ -1.84
BRE4YDL231C AIM29P36154 155 aa3.54□□□□□ -1.84
BRE4YDL231C DER1P38307 211 aa3.54□□□□□ -1.84
BRE4YDL231C EGT2P42835 1041 aa3.54□□□□□ -1.84
BRE4YDL231C RPL9BP51401 191 aaKnown RBP3.54□□□□□ -1.84
BRE4YDL231C SOK2P53438 785 aaPredicted RBP3.54□□□□□ -1.84
BRE4YDL231C SED1Q01589 338 aa3.54□□□□□ -1.84
BRE4YDL231C YMR181CQ03231 154 aa3.54□□□□□ -1.84
BRE4YDL231C YMR007WQ03675 126 aa3.54□□□□□ -1.84
BRE4YDL231C POS5Q06892 414 aa3.54□□□□□ -1.84
BRE4YDL231C YLR365WQ7LIF2 110 aa3.54□□□□□ -1.84
BRE4YDL231C YHR213W-AQ8TGT4 77 aa3.54□□□□□ -1.84
BRE4YDL231C RPL9AP05738 191 aaKnown RBP3.54□□□□□ -1.84
BRE4YDL231C TRP4P07285 380 aaPredicted RBP3.54□□□□□ -1.84
BRE4YDL231C RPS23AP0CX29 145 aaKnown RBP3.54□□□□□ -1.84
BRE4YDL231C RPS23BP0CX30 145 aa3.54□□□□□ -1.84
BRE4YDL231C CPR4P25334 318 aa3.54□□□□□ -1.84
BRE4YDL231C YKL187CP34231 750 aa3.54□□□□□ -1.84
BRE4YDL231C SHG1P38337 142 aa3.54□□□□□ -1.84
BRE4YDL231C SEN34P39707 275 aa3.54□□□□□ -1.84
BRE4YDL231C YEA4P40004 342 aa3.54□□□□□ -1.84
BRE4YDL231C COX15P40086 486 aa3.54□□□□□ -1.84
BRE4YDL231C SGN1P40561 250 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
BRE4YDL231C VMA21P41806 77 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms