RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	BNA7	Q04066	261 aa		0.04	□□□□□ -2.4
HMRA2	YCR096C	ARG80	P07249	177 aa		0.03	□□□□□ -2.4
HMRA2	YCR096C	CDC33	P07260	213 aa	Known RBP	0.03	□□□□□ -2.4
HMRA2	YCR096C	PPA2	P28239	310 aa		0.03	□□□□□ -2.4
HMRA2	YCR096C	BMH2	P34730	273 aa	Known RBP	0.03	□□□□□ -2.4
HMRA2	YCR096C	PAM17	P36147	197 aa		0.03	□□□□□ -2.4
HMRA2	YCR096C	HMF1	P40037	129 aa	Known RBP	0.03	□□□□□ -2.4
HMRA2	YCR096C	RTR1	P40084	226 aa	Predicted RBP	0.03	□□□□□ -2.4
HMRA2	YCR096C	YOL014W	Q08110	124 aa		0.03	□□□□□ -2.4
HMRA2	YCR096C	YAR023C	D6VPM8	179 aa		0.02	□□□□□ -2.41
HMRA2	YCR096C	YCR090C	P25654	182 aa	Known RBP	0.02	□□□□□ -2.41
HMRA2	YCR096C	PRP18	P33411	251 aa	Predicted RBP	0.02	□□□□□ -2.41
HMRA2	YCR096C	TAF14	P35189	244 aa		0.02	□□□□□ -2.41
HMRA2	YCR096C	SER2	P42941	309 aa		0.02	□□□□□ -2.41
HMRA2	YCR096C	RAD17	P48581	401 aa		0.02	□□□□□ -2.41
HMRA2	YCR096C	YNL033W	P53964	284 aa		0.02	□□□□□ -2.41
HMRA2	YCR096C	CCW12	Q12127	133 aa		0.02	□□□□□ -2.41
HMRA2	YCR096C	NHP6B	P11633	99 aa	Known RBP	0.01	□□□□□ -2.41
HMRA2	YCR096C	UBC8	P28263	218 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	AHT1	P29589	182 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	ARO7	P32178	256 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	YCR087C-A	P37263	153 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	YBR242W	P38331	238 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	OTU1	P43558	301 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	ALB1	P47019	175 aa	Predicted RBP	0.01	□□□□□ -2.41
HMRA2	YCR096C	IRC18	P47056	224 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	ARP3	P47117	449 aa	Known RBP	0.01	□□□□□ -2.41
HMRA2	YCR096C	VPS71	Q03433	280 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	NAT3	Q06504	195 aa		0.01	□□□□□ -2.41
HMRA2	YCR096C	MBF1	O14467	151 aa	Known RBP	0	□□□□□ -2.41
HMRA2	YCR096C	TIR1	P10863	254 aa		0	□□□□□ -2.41
HMRA2	YCR096C	STE18	P18852	110 aa		0	□□□□□ -2.41
HMRA2	YCR096C	CNB1	P25296	175 aa		0	□□□□□ -2.41
HMRA2	YCR096C	MGT1	P26188	188 aa		0	□□□□□ -2.41
HMRA2	YCR096C	SKI6	P46948	246 aa	Predicted RBP	0	□□□□□ -2.41
HMRA2	YCR096C	YJR111C	P47148	283 aa	Known RBP	0	□□□□□ -2.41
HMRA2	YCR096C	UBC12	P52491	188 aa		0	□□□□□ -2.41
HMRA2	YCR096C	YMR295C	Q03559	197 aa		0	□□□□□ -2.41
HMRA2	YCR096C	FIT1	Q04433	528 aa		0	□□□□□ -2.41
HMRA2	YCR096C	YMR253C	Q04835	414 aa		0	□□□□□ -2.41
HMRA2	YCR096C	MDM32	Q12171	622 aa		0	□□□□□ -2.41
HMRA2	YCR096C	RIF1	P29539	1916 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	FMP49	A0A023PZB3	126 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	STF2	P16965	84 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	RFA3	P26755	122 aa	Known RBP	-0.01	□□□□□ -2.41
HMRA2	YCR096C	GSP2	P32836	220 aa	Known RBP	-0.01	□□□□□ -2.41
HMRA2	YCR096C	ECM4	P36156	370 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	TRM5	P38793	499 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	YAR064W	P39563	99 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	MTW1	P39731	289 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	YER134C	P40081	178 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	MPM1	P40364	252 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	YRB1	P41920	201 aa	Known RBP	-0.01	□□□□□ -2.41
HMRA2	YCR096C	SED1	Q01589	338 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	ELP6	Q04868	273 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	YMR226C	Q05016	267 aa	Known RBP	-0.01	□□□□□ -2.41
HMRA2	YCR096C	FYV12	Q08559	129 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	YML100W-A	Q8TGT0	57 aa		-0.01	□□□□□ -2.41
HMRA2	YCR096C	COQ1	P18900	473 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	SFK1	P35735	353 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	ETR1	P38071	380 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	MAK5	P38112	773 aa	Predicted RBP	-0.02	□□□□□ -2.41
HMRA2	YCR096C	IKI1	P38874	309 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	RFC4	P40339	323 aa	Known RBP	-0.02	□□□□□ -2.41
HMRA2	YCR096C	YIL102C	P40488	101 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	GPI14	P47088	403 aa	Known RBP	-0.02	□□□□□ -2.41
HMRA2	YCR096C	YGL235W	P53071	178 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	RRP17	Q04031	235 aa	Predicted RBP	-0.02	□□□□□ -2.41
HMRA2	YCR096C	DYN3	Q04949	312 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	GIS3	Q12418	502 aa		-0.02	□□□□□ -2.41
HMRA2	YCR096C	MRS1	P07266	363 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	SNF4	P12904	322 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	YPK2	P18961	677 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	IDP1	P21954	428 aa	Known RBP	-0.03	□□□□□ -2.41
HMRA2	YCR096C	FMP23	P38231	175 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	SPC25	P40014	221 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	PDS1	P40316	373 aa	Predicted RBP	-0.03	□□□□□ -2.41
HMRA2	YCR096C	MSS2	P40990	351 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	CUP9	P41817	306 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	YFL019C	P43576	117 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	NOP19	P53317	196 aa	Predicted RBP	-0.03	□□□□□ -2.41
HMRA2	YCR096C	SHH3	Q04487	196 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	UPS1	Q05776	175 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	GET4	Q12125	312 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	YCL012C	Q8J0M4	134 aa		-0.03	□□□□□ -2.41
HMRA2	YCR096C	YCR023C	P25351	611 aa		-0.04	□□□□□ -2.42
HMRA2	YCR096C	ASF2	P32448	525 aa	Predicted RBP	-0.04	□□□□□ -2.42
HMRA2	YCR096C	AIM2	P39721	246 aa		-0.04	□□□□□ -2.42
HMRA2	YCR096C	GCN20	P43535	752 aa	Known RBP	-0.04	□□□□□ -2.42
HMRA2	YCR096C	YOL013W-A	P0C272	63 aa	Predicted RBP	-0.05	□□□□□ -2.42
HMRA2	YCR096C	NSE4	P43124	402 aa		-0.05	□□□□□ -2.42
HMRA2	YCR096C	DCV1	P43595	202 aa		-0.05	□□□□□ -2.42
HMRA2	YCR096C	AVO2	Q04749	426 aa		-0.05	□□□□□ -2.42
HMRA2	YCR096C	FUS2	Q05670	677 aa		-0.05	□□□□□ -2.42
HMRA2	YCR096C	HTB1	P02293	131 aa	Known RBP	-0.06	□□□□□ -2.42
HMRA2	YCR096C	HTB2	P02294	131 aa		-0.06	□□□□□ -2.42
HMRA2	YCR096C	YNL184C	P53876	108 aa		-0.06	□□□□□ -2.42
HMRA2	YCR096C	PIR1	Q03178	341 aa		-0.06	□□□□□ -2.42
HMRA2	YCR096C	ATP20	Q12233	115 aa		-0.06	□□□□□ -2.42
HMRA2	YCR096C	RUD3	Q12234	484 aa	Known RBP	-0.06	□□□□□ -2.42

Retrieved 100 of 5,963 RNA–protein pairs in 44 ms