RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C CUE4Q04201 117 aaPredicted RBP1.31□□□□□ -2.2
TRS20YBR254C YOL014WQ08110 124 aa1.31□□□□□ -2.2
TRS20YBR254C YPR014CQ6B0W2 109 aa1.31□□□□□ -2.2
TRS20YBR254C YML100W-AQ8TGT0 57 aa1.31□□□□□ -2.2
TRS20YBR254C FLO9P39712 1322 aa1.31□□□□□ -2.2
TRS20YBR254C UBR2Q07963 1872 aa1.31□□□□□ -2.2
TRS20YBR254C CHD1P32657 1468 aa1.31□□□□□ -2.2
TRS20YBR254C AHC2P25649 128 aa1.3□□□□□ -2.2
TRS20YBR254C MGT1P26188 188 aa1.3□□□□□ -2.2
TRS20YBR254C TRR1P29509 319 aaKnown RBP1.3□□□□□ -2.2
TRS20YBR254C OPY1P38271 328 aa1.3□□□□□ -2.2
TRS20YBR254C YBR219CP38317 127 aa1.3□□□□□ -2.2
TRS20YBR254C YJR111CP47148 283 aaKnown RBP1.3□□□□□ -2.2
TRS20YBR254C KNH1P50112 268 aa1.3□□□□□ -2.2
TRS20YBR254C UBC12P52491 188 aa1.3□□□□□ -2.2
TRS20YBR254C POP3P53833 195 aaPredicted RBP1.3□□□□□ -2.2
TRS20YBR254C YMR099CQ03161 297 aaKnown RBP1.3□□□□□ -2.2
TRS20YBR254C TLG1Q03322 224 aa1.3□□□□□ -2.2
TRS20YBR254C SHH3Q04487 196 aa1.3□□□□□ -2.2
TRS20YBR254C ANT1Q06497 328 aa1.3□□□□□ -2.2
TRS20YBR254C RAD28Q12021 506 aa1.3□□□□□ -2.2
TRS20YBR254C PDR18P53756 1333 aa1.3□□□□□ -2.2
TRS20YBR254C YAR023CD6VPM8 179 aa1.29□□□□□ -2.2
TRS20YBR254C YOL162WP0CF19 215 aa1.29□□□□□ -2.2
TRS20YBR254C SEC14P24280 304 aaKnown RBP1.29□□□□□ -2.2
TRS20YBR254C VPS51P36116 164 aa1.29□□□□□ -2.2
TRS20YBR254C SRP14P38985 146 aa1.29□□□□□ -2.2
TRS20YBR254C PGA1P53896 198 aa1.29□□□□□ -2.2
TRS20YBR254C PLP1Q04004 230 aa1.29□□□□□ -2.2
TRS20YBR254C SHH4Q06236 168 aa1.29□□□□□ -2.2
TRS20YBR254C YDL180WQ12301 547 aa1.29□□□□□ -2.2
TRS20YBR254C MPD1Q12404 318 aaKnown RBP1.29□□□□□ -2.2
TRS20YBR254C GCY1P14065 312 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
TRS20YBR254C SPO13P23624 291 aa1.28□□□□□ -2.2
TRS20YBR254C MTW1P39731 289 aa1.28□□□□□ -2.2
TRS20YBR254C JAC1P53193 184 aa1.28□□□□□ -2.2
TRS20YBR254C GIM5Q04493 163 aa1.28□□□□□ -2.2
TRS20YBR254C YHR007C-AQ07074 71 aa1.28□□□□□ -2.2
TRS20YBR254C CSI2Q08054 341 aa1.28□□□□□ -2.2
TRS20YBR254C ACC1Q00955 2233 aaKnown RBP1.27□□□□□ -2.21
TRS20YBR254C NSP1P14907 823 aaKnown RBP1.27□□□□□ -2.21
TRS20YBR254C SEC11P15367 167 aa1.27□□□□□ -2.21
TRS20YBR254C YER034WP40022 185 aaKnown RBP1.27□□□□□ -2.21
TRS20YBR254C YER135CP40082 130 aa1.27□□□□□ -2.21
TRS20YBR254C CUP9P41817 306 aa1.27□□□□□ -2.21
TRS20YBR254C MPC3P53311 146 aa1.27□□□□□ -2.21
TRS20YBR254C YIP3P53633 176 aa1.27□□□□□ -2.21
TRS20YBR254C VPS71Q03433 280 aa1.27□□□□□ -2.21
TRS20YBR254C YPR174CQ06616 221 aaPredicted RBP1.27□□□□□ -2.21
TRS20YBR254C YOR342CQ12182 319 aa1.27□□□□□ -2.21
TRS20YBR254C QCR8P08525 94 aa1.26□□□□□ -2.21
TRS20YBR254C GPA2P10823 449 aa1.26□□□□□ -2.21
TRS20YBR254C YGL010WP25338 174 aa1.26□□□□□ -2.21
TRS20YBR254C YKL102CP34249 101 aa1.26□□□□□ -2.21
TRS20YBR254C YKR041WP36134 250 aa1.26□□□□□ -2.21
TRS20YBR254C YKR045CP36138 183 aa1.26□□□□□ -2.21
TRS20YBR254C NSG1P38837 291 aa1.26□□□□□ -2.21
TRS20YBR254C RPL13BP40212 199 aaKnown RBP1.26□□□□□ -2.21
TRS20YBR254C GPI14P47088 403 aaKnown RBP1.26□□□□□ -2.21
TRS20YBR254C GRX5Q02784 150 aa1.26□□□□□ -2.21
TRS20YBR254C YLR162WQ06235 118 aa1.26□□□□□ -2.21
TRS20YBR254C BRX1Q08235 291 aaKnown RBP1.26□□□□□ -2.21
TRS20YBR254C GRE1Q08969 168 aa1.26□□□□□ -2.21
TRS20YBR254C PEX11Q12462 236 aa1.26□□□□□ -2.21
TRS20YBR254C RPL13AQ12690 199 aaPredicted RBP1.26□□□□□ -2.21
TRS20YBR254C YLR412C-AQ3E742 68 aa1.26□□□□□ -2.21
TRS20YBR254C TIR1P10863 254 aa1.25□□□□□ -2.21
TRS20YBR254C TVP38P36164 337 aa1.25□□□□□ -2.21
TRS20YBR254C YBR220CP38318 560 aa1.25□□□□□ -2.21
TRS20YBR254C NVJ1P38881 321 aa1.25□□□□□ -2.21
TRS20YBR254C YPL073CP40323 161 aa1.25□□□□□ -2.21
TRS20YBR254C YNL247WP53852 767 aaKnown RBP1.25□□□□□ -2.21
TRS20YBR254C YLR460CP54007 376 aa1.25□□□□□ -2.21
TRS20YBR254C GPI17Q04080 534 aa1.25□□□□□ -2.21
TRS20YBR254C HPT1Q04178 221 aaKnown RBP1.25□□□□□ -2.21
TRS20YBR254C NAT3Q06504 195 aa1.25□□□□□ -2.21
TRS20YBR254C IRC23Q08416 157 aa1.25□□□□□ -2.21
TRS20YBR254C YPR013CQ12145 317 aa1.25□□□□□ -2.21
TRS20YBR254C YLR050CQ12155 161 aaKnown RBP1.25□□□□□ -2.21
TRS20YBR254C CMC2Q3E7A4 109 aa1.25□□□□□ -2.21
TRS20YBR254C FPR1P20081 114 aaKnown RBP1.24□□□□□ -2.21
TRS20YBR254C IDP1P21954 428 aaKnown RBP1.24□□□□□ -2.21
TRS20YBR254C RAD51P25454 400 aa1.24□□□□□ -2.21
TRS20YBR254C CLG1P35190 452 aa1.24□□□□□ -2.21
TRS20YBR254C UPS2P35200 230 aa1.24□□□□□ -2.21
TRS20YBR254C FMP23P38231 175 aa1.24□□□□□ -2.21
TRS20YBR254C VMA22P38784 181 aa1.24□□□□□ -2.21
TRS20YBR254C SPC25P40014 221 aa1.24□□□□□ -2.21
TRS20YBR254C YER076CP40049 302 aa1.24□□□□□ -2.21
TRS20YBR254C NSA2P40078 261 aaKnown RBP1.24□□□□□ -2.21
TRS20YBR254C RFC2P40348 353 aa1.24□□□□□ -2.21
TRS20YBR254C YFL019CP43576 117 aa1.24□□□□□ -2.21
TRS20YBR254C SBH1P52870 82 aa1.24□□□□□ -2.21
TRS20YBR254C TIM13P53299 105 aa1.24□□□□□ -2.21
TRS20YBR254C YNL140CP53910 189 aa1.24□□□□□ -2.21
TRS20YBR254C YMR253CQ04835 414 aa1.24□□□□□ -2.21
TRS20YBR254C RPL2AP0CX45 254 aaKnown RBP1.23□□□□□ -2.21
TRS20YBR254C RPL2BP0CX46 254 aaKnown RBP1.23□□□□□ -2.21
TRS20YBR254C RPL35AP0CX84 120 aaKnown RBP1.23□□□□□ -2.21
TRS20YBR254C RPL35BP0CX85 120 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms