RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C RPB10P22139 70 aa5.87□□□□□ -1.47
TDP1YBR223C QCR9P22289 66 aa5.87□□□□□ -1.47
TDP1YBR223C YKL107WP34251 309 aa5.87□□□□□ -1.47
TDP1YBR223C ATP3P38077 311 aaKnown RBP5.87□□□□□ -1.47
TDP1YBR223C UME6P39001 836 aa5.87□□□□□ -1.47
TDP1YBR223C GET2P40056 285 aa5.87□□□□□ -1.47
TDP1YBR223C SMM1P53720 384 aaKnown RBP5.87□□□□□ -1.47
TDP1YBR223C YPL067CQ02754 198 aa5.87□□□□□ -1.47
TDP1YBR223C YDC1Q02896 317 aa5.87□□□□□ -1.47
TDP1YBR223C AVO2Q04749 426 aa5.87□□□□□ -1.47
TDP1YBR223C FMP27Q06179 2628 aa5.87□□□□□ -1.47
TDP1YBR223C RAF1Q06891 181 aa5.87□□□□□ -1.47
TDP1YBR223C PML1Q07930 204 aaPredicted RBP5.87□□□□□ -1.47
TDP1YBR223C HFA1P32874 2273 aa5.86□□□□□ -1.47
TDP1YBR223C SHB17P36136 271 aaKnown RBP5.86□□□□□ -1.47
TDP1YBR223C HSP10P38910 106 aa5.86□□□□□ -1.47
TDP1YBR223C WSC2P53832 503 aa5.86□□□□□ -1.47
TDP1YBR223C HSK3P69852 69 aa5.86□□□□□ -1.47
TDP1YBR223C RPS25BP0C0T4 108 aaKnown RBP5.85□□□□□ -1.47
TDP1YBR223C URA5P13298 226 aaKnown RBP5.85□□□□□ -1.47
TDP1YBR223C PTC7P38797 343 aa5.85□□□□□ -1.47
TDP1YBR223C YHR138CP38841 114 aaPredicted RBP5.85□□□□□ -1.47
TDP1YBR223C SIP18P50263 79 aa5.85□□□□□ -1.47
TDP1YBR223C YGL185CP53100 379 aa5.85□□□□□ -1.47
TDP1YBR223C YPL108WQ02872 168 aaPredicted RBP5.85□□□□□ -1.47
TDP1YBR223C DAL4Q04895 635 aa5.85□□□□□ -1.47
TDP1YBR223C RPS25AQ3E792 108 aaPredicted RBP5.85□□□□□ -1.47
TDP1YBR223C STE4P18851 423 aa5.85□□□□□ -1.47
TDP1YBR223C ACP1P32463 125 aa5.85□□□□□ -1.47
TDP1YBR223C MRPL28P36527 147 aa5.85□□□□□ -1.47
TDP1YBR223C RTC3P38804 111 aaPredicted RBP5.85□□□□□ -1.47
TDP1YBR223C SUR2P38992 349 aa5.85□□□□□ -1.47
TDP1YBR223C YGR269WP40326 108 aa5.85□□□□□ -1.47
TDP1YBR223C PAU5P43575 122 aa5.85□□□□□ -1.47
TDP1YBR223C YIP5P53108 310 aa5.85□□□□□ -1.47
TDP1YBR223C LIP2Q06005 328 aa5.85□□□□□ -1.47
TDP1YBR223C MED7Q08278 222 aa5.85□□□□□ -1.47
TDP1YBR223C ERV2Q12284 196 aa5.85□□□□□ -1.47
TDP1YBR223C RNH203Q12338 110 aa5.85□□□□□ -1.47
TDP1YBR223C RAX2Q12465 1220 aa5.85□□□□□ -1.47
TDP1YBR223C PET494P07390 489 aaPredicted RBP5.84□□□□□ -1.47
TDP1YBR223C RIP1P08067 215 aa5.84□□□□□ -1.47
TDP1YBR223C TY1A-HP0C2I4 478 aaKnown RBP5.84□□□□□ -1.47
TDP1YBR223C PAU19P0CE85 124 aa5.84□□□□□ -1.47
TDP1YBR223C PAU21P0CE86 164 aa5.84□□□□□ -1.47
TDP1YBR223C PAU22P0CE87 164 aa5.84□□□□□ -1.47
TDP1YBR223C NHP6AP11632 93 aaKnown RBP5.84□□□□□ -1.47
TDP1YBR223C PAU3P25610 124 aa5.84□□□□□ -1.47
TDP1YBR223C COQ3P27680 312 aa5.84□□□□□ -1.47
TDP1YBR223C AVT5P38176 459 aa5.84□□□□□ -1.47
TDP1YBR223C QDR3P38227 689 aa5.84□□□□□ -1.47
TDP1YBR223C RPS26AP39938 119 aaKnown RBP5.84□□□□□ -1.47
TDP1YBR223C RPS26BP39939 119 aaKnown RBP5.84□□□□□ -1.47
TDP1YBR223C COX15P40086 486 aa5.84□□□□□ -1.47
TDP1YBR223C ARP3P47117 449 aaKnown RBP5.84□□□□□ -1.47
TDP1YBR223C HCH1P53834 153 aa5.84□□□□□ -1.47
TDP1YBR223C DAD3P69850 94 aa5.84□□□□□ -1.47
TDP1YBR223C ARR3Q06598 404 aa5.84□□□□□ -1.47
TDP1YBR223C BOL1Q3E793 110 aa5.84□□□□□ -1.47
TDP1YBR223C ROX3P25046 220 aa5.83□□□□□ -1.48
TDP1YBR223C LDB16P25587 256 aa5.83□□□□□ -1.48
TDP1YBR223C ATG15P25641 520 aa5.83□□□□□ -1.48
TDP1YBR223C DAL3P32459 195 aa5.83□□□□□ -1.48
TDP1YBR223C REC104P33323 182 aa5.83□□□□□ -1.48
TDP1YBR223C UBC13P52490 153 aa5.83□□□□□ -1.48
TDP1YBR223C YMR007WQ03675 126 aa5.83□□□□□ -1.48
TDP1YBR223C ECM18Q04623 453 aa5.83□□□□□ -1.48
TDP1YBR223C FRQ1Q06389 190 aa5.83□□□□□ -1.48
TDP1YBR223C USV1Q12132 391 aa5.83□□□□□ -1.48
TDP1YBR223C YOP1Q12402 180 aa5.83□□□□□ -1.48
TDP1YBR223C BGL2P15703 313 aaKnown RBP5.82□□□□□ -1.48
TDP1YBR223C YBL059WP34224 193 aa5.82□□□□□ -1.48
TDP1YBR223C CUE1P38428 203 aa5.82□□□□□ -1.48
TDP1YBR223C LSM4P40070 187 aaKnown RBP5.82□□□□□ -1.48
TDP1YBR223C LOC1P43586 204 aaPredicted RBP5.82□□□□□ -1.48
TDP1YBR223C ATG27P46989 271 aa5.82□□□□□ -1.48
TDP1YBR223C APS2Q00381 147 aa5.82□□□□□ -1.48
TDP1YBR223C CUE4Q04201 117 aaPredicted RBP5.82□□□□□ -1.48
TDP1YBR223C LPP1Q04396 274 aa5.82□□□□□ -1.48
TDP1YBR223C SEN15Q04675 128 aa5.82□□□□□ -1.48
TDP1YBR223C RFM1Q12192 310 aa5.82□□□□□ -1.48
TDP1YBR223C IRC22P40006 225 aa5.81□□□□□ -1.48
TDP1YBR223C LST7P53237 242 aa5.81□□□□□ -1.48
TDP1YBR223C CYT2Q00873 224 aa5.81□□□□□ -1.48
TDP1YBR223C YDR114CQ04597 100 aa5.81□□□□□ -1.48
TDP1YBR223C POC4Q12245 148 aaPredicted RBP5.81□□□□□ -1.48
TDP1YBR223C LAS17Q12446 633 aa5.81□□□□□ -1.48
TDP1YBR223C FMP49A0A023PZB3 126 aa5.81□□□□□ -1.48
TDP1YBR223C VPS63O13549 108 aa5.81□□□□□ -1.48
TDP1YBR223C HEM4P06174 275 aa5.81□□□□□ -1.48
TDP1YBR223C RPS22AP0C0W1 130 aaKnown RBP5.81□□□□□ -1.48
TDP1YBR223C YMR31P19955 123 aa5.81□□□□□ -1.48
TDP1YBR223C AFR1P33304 620 aa5.81□□□□□ -1.48
TDP1YBR223C DER1P38307 211 aa5.81□□□□□ -1.48
TDP1YBR223C YEL057CP39983 233 aa5.81□□□□□ -1.48
TDP1YBR223C NSA2P40078 261 aaKnown RBP5.81□□□□□ -1.48
TDP1YBR223C SEC24P40482 926 aaKnown RBP5.81□□□□□ -1.48
TDP1YBR223C HIT1P46973 164 aa5.81□□□□□ -1.48
TDP1YBR223C GON7P46984 123 aa5.81□□□□□ -1.48
TDP1YBR223C ERV14P53173 138 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms