RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene SNN1, Length 309 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNN1	YNL086W	OKP1	P53298	406 aa		4.64	□□□□□ -1.67
SNN1	YNL086W	MSO1	P53604	210 aa	Known RBP	4.64	□□□□□ -1.67
SNN1	YNL086W	ACT1	P60010	375 aa	Known RBP	4.64	□□□□□ -1.67
SNN1	YNL086W	SPC2	Q04969	178 aa		4.64	□□□□□ -1.67
SNN1	YNL086W	HOR7	Q05827	59 aa		4.64	□□□□□ -1.67
SNN1	YNL086W	YOR289W	Q12012	251 aa	Predicted RBP	4.64	□□□□□ -1.67
SNN1	YNL086W	MPD1	Q12404	318 aa	Known RBP	4.64	□□□□□ -1.67
SNN1	YNL086W	RPL25	P04456	142 aa	Known RBP	4.63	□□□□□ -1.67
SNN1	YNL086W	BGL2	P15703	313 aa	Known RBP	4.63	□□□□□ -1.67
SNN1	YNL086W	VPS55	P47111	140 aa		4.63	□□□□□ -1.67
SNN1	YNL086W	TTI2	P47168	421 aa		4.63	□□□□□ -1.67
SNN1	YNL086W	YGL262W	P53054	175 aa		4.63	□□□□□ -1.67
SNN1	YNL086W	ECM18	Q04623	453 aa		4.63	□□□□□ -1.67
SNN1	YNL086W	RRG8	Q06109	277 aa		4.63	□□□□□ -1.67
SNN1	YNL086W	LOT6	Q07923	191 aa		4.63	□□□□□ -1.67
SNN1	YNL086W	BBP1	Q12365	385 aa		4.63	□□□□□ -1.67
SNN1	YNL086W	DCP1	Q12517	231 aa	Predicted RBP	4.63	□□□□□ -1.67
SNN1	YNL086W	RPL18A	P0CX49	186 aa	Known RBP	4.62	□□□□□ -1.67
SNN1	YNL086W	RPL18B	P0CX50	186 aa	Known RBP	4.62	□□□□□ -1.67
SNN1	YNL086W	INO2	P26798	304 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	CBT1	P36038	271 aa	Predicted RBP	4.62	□□□□□ -1.67
SNN1	YNL086W	YHK8	P38776	514 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	DDI1	P40087	428 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	DLS1	P40366	167 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	WWM1	P43582	211 aa	Known RBP	4.62	□□□□□ -1.67
SNN1	YNL086W	CCC1	P47818	322 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	PNC1	P53184	216 aa	Known RBP	4.62	□□□□□ -1.67
SNN1	YNL086W	SPO19	Q03029	223 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	GRH1	Q04410	372 aa	Known RBP	4.62	□□□□□ -1.67
SNN1	YNL086W	SCW10	Q04951	389 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	JID1	Q12350	301 aa		4.62	□□□□□ -1.67
SNN1	YNL086W	DPB2	P24482	689 aa	Predicted RBP	4.61	□□□□□ -1.67
SNN1	YNL086W	ZUO1	P32527	433 aa	Known RBP	4.61	□□□□□ -1.67
SNN1	YNL086W	PDX3	P38075	228 aa	Known RBP	4.61	□□□□□ -1.67
SNN1	YNL086W	ECM31	P38122	312 aa		4.61	□□□□□ -1.67
SNN1	YNL086W	RRG9	P40156	214 aa		4.61	□□□□□ -1.67
SNN1	YNL086W	MIG2	P53035	382 aa		4.61	□□□□□ -1.67
SNN1	YNL086W	LST7	P53237	242 aa		4.61	□□□□□ -1.67
SNN1	YNL086W	SNZ1	Q03148	297 aa		4.61	□□□□□ -1.67
SNN1	YNL086W	YMR315W	Q04869	349 aa	Known RBP	4.61	□□□□□ -1.67
SNN1	YNL086W	PPT2	Q12036	173 aa		4.61	□□□□□ -1.67
SNN1	YNL086W	PIS1	P06197	220 aa	Known RBP	4.6	□□□□□ -1.67
SNN1	YNL086W	CDC10	P25342	322 aa	Known RBP	4.6	□□□□□ -1.67
SNN1	YNL086W	UBC8	P28263	218 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	VMA5	P31412	392 aa	Known RBP	4.6	□□□□□ -1.67
SNN1	YNL086W	ZRT3	P34240	503 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	SWD2	P36104	329 aa	Predicted RBP	4.6	□□□□□ -1.67
SNN1	YNL086W	PRS4	P38063	326 aa	Predicted RBP	4.6	□□□□□ -1.67
SNN1	YNL086W	FAR7	P43592	221 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	YML122C	Q03207	126 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	MIX17	Q03667	156 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	YOL029C	Q08187	201 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	PAA1	Q12447	191 aa	Known RBP	4.6	□□□□□ -1.67
SNN1	YNL086W	HUT1	Q12520	339 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	HTZ1	Q12692	134 aa	Known RBP	4.6	□□□□□ -1.67
SNN1	YNL086W	YCR024C-B	Q3E7Z8	88 aa		4.6	□□□□□ -1.67
SNN1	YNL086W	TDH1	P00360	332 aa	Known RBP	4.59	□□□□□ -1.67
SNN1	YNL086W	FAR1	P21268	830 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	CPR4	P25334	318 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	ATG22	P25568	528 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	AGA1	P32323	725 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	DPH5	P32469	300 aa	Predicted RBP	4.59	□□□□□ -1.67
SNN1	YNL086W	RAD23	P32628	398 aa	Known RBP	4.59	□□□□□ -1.67
SNN1	YNL086W	YKL075C	P36083	450 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	SSH1	P38353	490 aa	Known RBP	4.59	□□□□□ -1.67
SNN1	YNL086W	RIO2	P40160	425 aa	Known RBP	4.59	□□□□□ -1.67
SNN1	YNL086W	PRM5	P40476	318 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	KEG1	P43614	200 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	CAB4	P53332	305 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	YLR152C	P54072	576 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	YMR226C	Q05016	267 aa	Known RBP	4.59	□□□□□ -1.67
SNN1	YNL086W	UPS1	Q05776	175 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	DTD1	Q07648	150 aa	Known RBP	4.59	□□□□□ -1.67
SNN1	YNL086W	YOR186W	Q08560	144 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	VIK1	Q12045	647 aa		4.59	□□□□□ -1.67
SNN1	YNL086W	TRP1	P00912	224 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	SDH4	P37298	181 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	SOP4	P39543	234 aa	Predicted RBP	4.58	□□□□□ -1.68
SNN1	YNL086W	CDC40	P40968	455 aa	Predicted RBP	4.58	□□□□□ -1.68
SNN1	YNL086W	ERJ5	P43613	295 aa	Predicted RBP	4.58	□□□□□ -1.68
SNN1	YNL086W	MRX5	P47007	382 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	AIM24	P47127	394 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	RMR1	P53060	241 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	TOS8	P53147	276 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	PRM3	Q08931	133 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	PST2	Q12335	198 aa	Known RBP	4.58	□□□□□ -1.68
SNN1	YNL086W	YPR1	Q12458	312 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	PCL9	Q12477	304 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	YCL021W-A	Q96VH3	125 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	ATG40	Q99325	256 aa		4.58	□□□□□ -1.68
SNN1	YNL086W	ADK1	P07170	222 aa	Known RBP	4.57	□□□□□ -1.68
SNN1	YNL086W	FBA1	P14540	359 aa	Known RBP	4.57	□□□□□ -1.68
SNN1	YNL086W	YKL070W	P36087	169 aa		4.57	□□□□□ -1.68
SNN1	YNL086W	LCB3	P47013	409 aa		4.57	□□□□□ -1.68
SNN1	YNL086W	HSK3	P69852	69 aa		4.57	□□□□□ -1.68
SNN1	YNL086W	YLR283W	Q05867	314 aa		4.57	□□□□□ -1.68
SNN1	YNL086W	MRX9	Q07349	420 aa	Known RBP	4.57	□□□□□ -1.68
SNN1	YNL086W	CDC28	P00546	298 aa	Known RBP	4.56	□□□□□ -1.68
SNN1	YNL086W	CYC3	P06182	269 aa		4.56	□□□□□ -1.68
SNN1	YNL086W	OAC1	P32332	324 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms