RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W VPS13Q07878 3144 aa5.81□□□□□ -1.48
HDA1YNL021W Q0144Q9ZZW2 109 aa5.81□□□□□ -1.48
HDA1YNL021W STE7P06784 515 aa5.81□□□□□ -1.48
HDA1YNL021W PET54P10834 293 aa5.81□□□□□ -1.48
HDA1YNL021W SHG1P38337 142 aa5.81□□□□□ -1.48
HDA1YNL021W APQ12P40532 138 aa5.81□□□□□ -1.48
HDA1YNL021W COS10P52924 374 aa5.81□□□□□ -1.48
HDA1YNL021W YOR376WQ08900 122 aa5.81□□□□□ -1.48
HDA1YNL021W HMS1Q12398 434 aa5.81□□□□□ -1.48
HDA1YNL021W HIS3P06633 220 aa5.8□□□□□ -1.48
HDA1YNL021W DPM1P14020 267 aaKnown RBP5.8□□□□□ -1.48
HDA1YNL021W GRX2P17695 143 aaKnown RBP5.8□□□□□ -1.48
HDA1YNL021W YBR285WP38354 144 aa5.8□□□□□ -1.48
HDA1YNL021W PSA1P41940 361 aaKnown RBP5.8□□□□□ -1.48
HDA1YNL021W SDT1P53078 280 aa5.8□□□□□ -1.48
HDA1YNL021W YMR279CQ03263 540 aa5.8□□□□□ -1.48
HDA1YNL021W YML108WQ03759 105 aa5.8□□□□□ -1.48
HDA1YNL021W SPG4Q04438 115 aa5.8□□□□□ -1.48
HDA1YNL021W KIN28P06242 306 aa5.8□□□□□ -1.48
HDA1YNL021W YCR101CP25607 182 aa5.8□□□□□ -1.48
HDA1YNL021W MRPL28P36527 147 aa5.8□□□□□ -1.48
HDA1YNL021W TRM7P38238 310 aaKnown RBP5.8□□□□□ -1.48
HDA1YNL021W FAR7P43592 221 aa5.8□□□□□ -1.48
HDA1YNL021W NCA3P46955 337 aa5.8□□□□□ -1.48
HDA1YNL021W IGO1P53897 168 aa5.8□□□□□ -1.48
HDA1YNL021W NOC4Q06512 552 aaPredicted RBP5.8□□□□□ -1.48
HDA1YNL021W MSB2P32334 1306 aa5.79□□□□□ -1.48
HDA1YNL021W RPS28BP0C0X0 67 aaKnown RBP5.79□□□□□ -1.48
HDA1YNL021W RPS8AP0CX39 200 aaKnown RBP5.79□□□□□ -1.48
HDA1YNL021W RPS8BP0CX40 200 aaKnown RBP5.79□□□□□ -1.48
HDA1YNL021W NUP49Q02199 472 aa5.79□□□□□ -1.48
HDA1YNL021W SWP1Q02795 286 aa5.79□□□□□ -1.48
HDA1YNL021W AKR2Q12013 749 aa5.79□□□□□ -1.48
HDA1YNL021W TFC7Q12415 435 aa5.79□□□□□ -1.48
HDA1YNL021W AGC1Q12482 902 aa5.79□□□□□ -1.48
HDA1YNL021W RPS28AQ3E7X9 67 aaPredicted RBP5.79□□□□□ -1.48
HDA1YNL021W RIB3Q99258 208 aa5.79□□□□□ -1.48
HDA1YNL021W CPR4P25334 318 aa5.78□□□□□ -1.48
HDA1YNL021W BAT1P38891 393 aaKnown RBP5.78□□□□□ -1.48
HDA1YNL021W AVT7P40501 490 aa5.78□□□□□ -1.48
HDA1YNL021W EGT2P42835 1041 aa5.78□□□□□ -1.48
HDA1YNL021W NRM1P53718 249 aa5.78□□□□□ -1.48
HDA1YNL021W WSC2P53832 503 aa5.78□□□□□ -1.48
HDA1YNL021W FMP41P53889 259 aaKnown RBP5.78□□□□□ -1.48
HDA1YNL021W PET191Q02772 108 aa5.78□□□□□ -1.48
HDA1YNL021W YMR315WQ04869 349 aaKnown RBP5.78□□□□□ -1.48
HDA1YNL021W GAS2Q06135 555 aa5.78□□□□□ -1.48
HDA1YNL021W BBP1Q12365 385 aa5.78□□□□□ -1.48
HDA1YNL021W SFC1P33303 322 aa5.78□□□□□ -1.48
HDA1YNL021W YND1P40009 630 aa5.78□□□□□ -1.48
HDA1YNL021W PRM5P40476 318 aa5.78□□□□□ -1.48
HDA1YNL021W YJL213WP40896 331 aa5.78□□□□□ -1.48
HDA1YNL021W ADD37Q03233 198 aa5.78□□□□□ -1.48
HDA1YNL021W YLR036CQ07986 203 aa5.78□□□□□ -1.48
HDA1YNL021W YHR139C-AO13536 103 aa5.77□□□□□ -1.49
HDA1YNL021W TIM9O74700 87 aa5.77□□□□□ -1.49
HDA1YNL021W FRM2P37261 193 aa5.77□□□□□ -1.49
HDA1YNL021W ARC40P38328 384 aaKnown RBP5.77□□□□□ -1.49
HDA1YNL021W YJL016WP47072 561 aa5.77□□□□□ -1.49
HDA1YNL021W PAC10P48363 199 aa5.77□□□□□ -1.49
HDA1YNL021W SDS23P53172 527 aa5.77□□□□□ -1.49
HDA1YNL021W YGL034CP53186 121 aa5.77□□□□□ -1.49
HDA1YNL021W DYN2Q02647 92 aa5.77□□□□□ -1.49
HDA1YNL021W MSI1P13712 422 aa5.77□□□□□ -1.49
HDA1YNL021W CPR1P14832 162 aaKnown RBP5.77□□□□□ -1.49
HDA1YNL021W MPM1P40364 252 aa5.77□□□□□ -1.49
HDA1YNL021W YMR099CQ03161 297 aaKnown RBP5.77□□□□□ -1.49
HDA1YNL021W MSA1Q08471 629 aa5.77□□□□□ -1.49
HDA1YNL021W YLR361C-AQ3E795 98 aa5.77□□□□□ -1.49
HDA1YNL021W SLH1P53327 1967 aaKnown RBP5.76□□□□□ -1.49
HDA1YNL021W ZWF1P11412 505 aaKnown RBP5.76□□□□□ -1.49
HDA1YNL021W TRS65P32893 560 aa5.76□□□□□ -1.49
HDA1YNL021W YNL046WP53956 172 aa5.76□□□□□ -1.49
HDA1YNL021W CRZ1P53968 678 aa5.76□□□□□ -1.49
HDA1YNL021W TIR4Q12218 487 aaPredicted RBP5.76□□□□□ -1.49
HDA1YNL021W HTZ1Q12692 134 aaKnown RBP5.76□□□□□ -1.49
HDA1YNL021W MHF1Q3E835 90 aa5.76□□□□□ -1.49
HDA1YNL021W FAB1P34756 2278 aa5.76□□□□□ -1.49
HDA1YNL021W CDC28P00546 298 aaKnown RBP5.75□□□□□ -1.49
HDA1YNL021W ERD2P18414 219 aa5.75□□□□□ -1.49
HDA1YNL021W RPS1BP23248 255 aaKnown RBP5.75□□□□□ -1.49
HDA1YNL021W CDC50P25656 391 aa5.75□□□□□ -1.49
HDA1YNL021W OAC1P32332 324 aa5.75□□□□□ -1.49
HDA1YNL021W AVT6P40074 448 aa5.75□□□□□ -1.49
HDA1YNL021W TIF34P40217 347 aaKnown RBP5.75□□□□□ -1.49
HDA1YNL021W RRP40Q08285 240 aaKnown RBP5.75□□□□□ -1.49
HDA1YNL021W LHP1P33399 275 aaKnown RBP5.75□□□□□ -1.49
HDA1YNL021W OXA1P39952 402 aa5.75□□□□□ -1.49
HDA1YNL021W HAC1P41546 238 aa5.75□□□□□ -1.49
HDA1YNL021W MED11Q99278 115 aa5.75□□□□□ -1.49
HDA1YNL021W BUD23P25627 275 aaPredicted RBP5.74□□□□□ -1.49
HDA1YNL021W SRX1P36077 127 aa5.74□□□□□ -1.49
HDA1YNL021W ECM33P38248 429 aaKnown RBP5.74□□□□□ -1.49
HDA1YNL021W SPO73P40031 143 aa5.74□□□□□ -1.49
HDA1YNL021W COG5P53951 403 aa5.74□□□□□ -1.49
HDA1YNL021W ABF2Q02486 183 aa5.74□□□□□ -1.49
HDA1YNL021W FSH2Q05015 223 aa5.74□□□□□ -1.49
HDA1YNL021W NEJ1Q06148 342 aa5.74□□□□□ -1.49
HDA1YNL021W RAX2Q12465 1220 aa5.74□□□□□ -1.49
HDA1YNL021W LSM12P38828 187 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms