RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C SWP1Q02795 286 aa0.81□□□□□ -2.28
UBX4YMR067C SNZ1Q03148 297 aa0.81□□□□□ -2.28
UBX4YMR067C AIM36Q03798 255 aa0.81□□□□□ -2.28
UBX4YMR067C FSF1Q12029 327 aaKnown RBP0.81□□□□□ -2.28
UBX4YMR067C NUP188P52593 1655 aaKnown RBP0.81□□□□□ -2.28
UBX4YMR067C SPP41P38904 1435 aa0.81□□□□□ -2.28
UBX4YMR067C TY3B-GQ99315 1547 aa0.8□□□□□ -2.28
UBX4YMR067C SHE2P36068 246 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
UBX4YMR067C URA8P38627 578 aaPredicted RBP0.8□□□□□ -2.28
UBX4YMR067C YAE1P47118 141 aaPredicted RBP0.8□□□□□ -2.28
UBX4YMR067C KAP95Q06142 861 aaKnown RBP0.8□□□□□ -2.28
UBX4YMR067C YOR029WQ12243 111 aa0.8□□□□□ -2.28
UBX4YMR067C ATG40Q99325 256 aa0.8□□□□□ -2.28
UBX4YMR067C SNT2P53127 1403 aa0.8□□□□□ -2.28
UBX4YMR067C MYO4P32492 1471 aa0.8□□□□□ -2.28
UBX4YMR067C IQG1Q12280 1495 aa0.8□□□□□ -2.28
UBX4YMR067C SNQ2P32568 1501 aaKnown RBP0.79□□□□□ -2.28
UBX4YMR067C STU1P38198 1513 aa0.79□□□□□ -2.28
UBX4YMR067C PDR12Q02785 1511 aa0.79□□□□□ -2.28
UBX4YMR067C YLR156WP0CE96 114 aa0.79□□□□□ -2.28
UBX4YMR067C YLR159WP0CE97 114 aa0.79□□□□□ -2.28
UBX4YMR067C YLR161WP0CE98 114 aa0.79□□□□□ -2.28
UBX4YMR067C NSP1P14907 823 aaKnown RBP0.79□□□□□ -2.28
UBX4YMR067C MRPL17P36528 281 aa0.79□□□□□ -2.28
UBX4YMR067C SOK1P40317 901 aa0.79□□□□□ -2.28
UBX4YMR067C PRM8P53174 237 aa0.79□□□□□ -2.28
UBX4YMR067C GAS3Q03655 524 aa0.79□□□□□ -2.28
UBX4YMR067C PAM18Q07914 168 aa0.79□□□□□ -2.28
UBX4YMR067C GPM2Q12008 311 aa0.79□□□□□ -2.28
UBX4YMR067C TUS1Q06412 1307 aa0.79□□□□□ -2.28
UBX4YMR067C TSC11P40061 1430 aa0.79□□□□□ -2.28
UBX4YMR067C SMC4Q12267 1418 aa0.79□□□□□ -2.28
UBX4YMR067C HAP1P0CE41 1502 aa0.79□□□□□ -2.28
UBX4YMR067C GCN2P15442 1659 aa0.78□□□□□ -2.28
UBX4YMR067C SPT3P06844 337 aa0.78□□□□□ -2.28
UBX4YMR067C BCY1P07278 416 aaKnown RBP0.78□□□□□ -2.28
UBX4YMR067C OPY1P38271 328 aa0.78□□□□□ -2.28
UBX4YMR067C CUE1P38428 203 aa0.78□□□□□ -2.28
UBX4YMR067C SIP3P38717 1229 aa0.78□□□□□ -2.28
UBX4YMR067C YAP3P38749 330 aa0.78□□□□□ -2.28
UBX4YMR067C EDC3P39998 551 aaKnown RBP0.78□□□□□ -2.28
UBX4YMR067C RCE1Q03530 315 aa0.78□□□□□ -2.28
UBX4YMR067C YSP2Q06681 1438 aa0.78□□□□□ -2.28
UBX4YMR067C YOR1P53049 1477 aa0.78□□□□□ -2.28
UBX4YMR067C VMR1P38735 1592 aa0.78□□□□□ -2.29
UBX4YMR067C IML1P47170 1584 aa0.78□□□□□ -2.29
UBX4YMR067C RRP5Q05022 1729 aaKnown RBP0.78□□□□□ -2.29
UBX4YMR067C FKS3Q04952 1785 aa0.78□□□□□ -2.29
UBX4YMR067C MRPL25P23369 157 aa0.77□□□□□ -2.29
UBX4YMR067C SRY1P36007 326 aa0.77□□□□□ -2.29
UBX4YMR067C FLX1P40464 311 aa0.77□□□□□ -2.29
UBX4YMR067C TRM9P49957 279 aa0.77□□□□□ -2.29
UBX4YMR067C NUP84P52891 726 aa0.77□□□□□ -2.29
UBX4YMR067C ARO8P53090 500 aaKnown RBP0.77□□□□□ -2.29
UBX4YMR067C NSA1P53136 463 aaPredicted RBP0.77□□□□□ -2.29
UBX4YMR067C YOL107WQ12239 342 aa0.77□□□□□ -2.29
UBX4YMR067C SSN2P38931 1420 aa0.77□□□□□ -2.29
UBX4YMR067C POL1P13382 1468 aa0.77□□□□□ -2.29
UBX4YMR067C URB1P34241 1764 aaKnown RBP0.77□□□□□ -2.29
UBX4YMR067C BCK1Q01389 1478 aa0.76□□□□□ -2.29
UBX4YMR067C GVP36P40531 326 aaKnown RBP0.76□□□□□ -2.29
UBX4YMR067C BNA6P43619 295 aa0.76□□□□□ -2.29
UBX4YMR067C ATG31Q12421 196 aa0.76□□□□□ -2.29
UBX4YMR067C TY4B-HP0C2J7 1802 aa0.75□□□□□ -2.29
UBX4YMR067C TY4B-JP47024 1803 aa0.75□□□□□ -2.29
UBX4YMR067C PDR11P40550 1411 aa0.75□□□□□ -2.29
UBX4YMR067C RPO26P20435 155 aa0.75□□□□□ -2.29
UBX4YMR067C CDC10P25342 322 aaKnown RBP0.75□□□□□ -2.29
UBX4YMR067C YBR285WP38354 144 aa0.75□□□□□ -2.29
UBX4YMR067C YFL065CP43539 102 aa0.75□□□□□ -2.29
UBX4YMR067C CWC27Q02770 301 aa0.75□□□□□ -2.29
UBX4YMR067C YRF1-3P0CX14 1859 aa0.75□□□□□ -2.29
UBX4YMR067C YRF1-7P0CX15 1859 aa0.75□□□□□ -2.29
UBX4YMR067C YRF1-6P53819 1859 aa0.75□□□□□ -2.29
UBX4YMR067C RIM15P43565 1770 aa0.75□□□□□ -2.29
UBX4YMR067C SNF2P22082 1703 aa0.75□□□□□ -2.29
UBX4YMR067C APC1P53886 1748 aa0.75□□□□□ -2.29
UBX4YMR067C FAS2P19097 1887 aaKnown RBP0.74□□□□□ -2.29
UBX4YMR067C YLR236CA0A023PZG4 107 aa0.74□□□□□ -2.29
UBX4YMR067C TIM9O74700 87 aa0.74□□□□□ -2.29
UBX4YMR067C RPT5P33297 434 aaKnown RBP0.74□□□□□ -2.29
UBX4YMR067C RIB7P33312 244 aa0.74□□□□□ -2.29
UBX4YMR067C NTF2P33331 125 aaKnown RBP0.74□□□□□ -2.29
UBX4YMR067C SKG1P36169 355 aa0.74□□□□□ -2.29
UBX4YMR067C YHL042WP38729 150 aa0.74□□□□□ -2.29
UBX4YMR067C SRL4Q03085 281 aa0.74□□□□□ -2.29
UBX4YMR067C CUE4Q04201 117 aaPredicted RBP0.74□□□□□ -2.29
UBX4YMR067C YLR173WQ06247 608 aa0.74□□□□□ -2.29
UBX4YMR067C PDR5P33302 1511 aaKnown RBP0.74□□□□□ -2.29
UBX4YMR067C NUP192P47054 1683 aa0.73□□□□□ -2.29
UBX4YMR067C SEC11P15367 167 aa0.73□□□□□ -2.29
UBX4YMR067C EAF6P47128 113 aa0.73□□□□□ -2.29
UBX4YMR067C CDC123Q05791 360 aa0.73□□□□□ -2.29
UBX4YMR067C YHR007C-AQ07074 71 aa0.73□□□□□ -2.29
UBX4YMR067C RRP36Q12481 300 aaPredicted RBP0.73□□□□□ -2.29
UBX4YMR067C CAT8P39113 1433 aa0.72□□□□□ -2.29
UBX4YMR067C SEC17P32602 292 aa0.72□□□□□ -2.29
UBX4YMR067C YNL247WP53852 767 aaKnown RBP0.72□□□□□ -2.29
UBX4YMR067C MCP1Q12106 302 aa0.72□□□□□ -2.29
UBX4YMR067C MED4Q12343 284 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms