RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C MDM35O60200 86 aa2.06□□□□□ -2.08
CSF1YLR087C YPT1P01123 206 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C FRE4P53746 719 aa2.06□□□□□ -2.08
CSF1YLR087C INN1P53901 409 aa2.06□□□□□ -2.08
CSF1YLR087C UPS3Q04006 179 aa2.06□□□□□ -2.08
CSF1YLR087C YOR283WQ12040 230 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C RKI1Q12189 258 aa2.06□□□□□ -2.08
CSF1YLR087C YKR104WP0CE69 306 aa2.06□□□□□ -2.08
CSF1YLR087C YRA2P36036 203 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
CSF1YLR087C SHO1P40073 367 aa2.06□□□□□ -2.08
CSF1YLR087C YJR115WP47152 169 aa2.06□□□□□ -2.08
CSF1YLR087C POP3P53833 195 aaPredicted RBP2.06□□□□□ -2.08
CSF1YLR087C RDI1Q12434 202 aa2.06□□□□□ -2.08
CSF1YLR087C PRM7Q12459 698 aa2.06□□□□□ -2.08
CSF1YLR087C YPL119C-AQ3E751 87 aa2.06□□□□□ -2.08
CSF1YLR087C TOR2P32600 2474 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C Q0255P03881 472 aa2.06□□□□□ -2.08
CSF1YLR087C HEM13P11353 328 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C AAC3P18238 307 aa2.06□□□□□ -2.08
CSF1YLR087C YHL049CP38722 271 aa2.06□□□□□ -2.08
CSF1YLR087C YHR138CP38841 114 aaPredicted RBP2.06□□□□□ -2.08
CSF1YLR087C YER085CP40058 173 aa2.06□□□□□ -2.08
CSF1YLR087C CYB5P40312 120 aa2.06□□□□□ -2.08
CSF1YLR087C YGR151CP53287 111 aa2.06□□□□□ -2.08
CSF1YLR087C SCW4P53334 386 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C WTM2Q12206 467 aa2.06□□□□□ -2.08
CSF1YLR087C IGO2Q9P305 131 aa2.06□□□□□ -2.08
CSF1YLR087C COX2P00410 251 aa2.06□□□□□ -2.08
CSF1YLR087C UBI4P0CG63 381 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C MDM10P18409 493 aa2.06□□□□□ -2.08
CSF1YLR087C YCR006CP25350 157 aa2.06□□□□□ -2.08
CSF1YLR087C AUR1P36107 401 aaPredicted RBP2.06□□□□□ -2.08
CSF1YLR087C PRS3P38689 320 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C OST3P48439 350 aa2.06□□□□□ -2.08
CSF1YLR087C YKR011CQ02209 353 aa2.06□□□□□ -2.08
CSF1YLR087C STD1Q02794 444 aa2.06□□□□□ -2.08
CSF1YLR087C TRI1Q05024 226 aa2.06□□□□□ -2.08
CSF1YLR087C FCY22Q12119 530 aa2.06□□□□□ -2.08
CSF1YLR087C SCS22Q6Q595 175 aa2.06□□□□□ -2.08
CSF1YLR087C URA5P13298 226 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C YET1P35723 206 aa2.06□□□□□ -2.08
CSF1YLR087C DER1P38307 211 aa2.06□□□□□ -2.08
CSF1YLR087C YEL076CP39971 216 aa2.06□□□□□ -2.08
CSF1YLR087C OSW5P40219 148 aa2.06□□□□□ -2.08
CSF1YLR087C IRC18P47056 224 aa2.06□□□□□ -2.08
CSF1YLR087C TAD2P47058 250 aa2.06□□□□□ -2.08
CSF1YLR087C YGL230CP53074 147 aa2.06□□□□□ -2.08
CSF1YLR087C YPQ1Q12010 308 aa2.06□□□□□ -2.08
CSF1YLR087C MRPL28P36527 147 aa2.06□□□□□ -2.08
CSF1YLR087C YPL071CQ02864 156 aa2.06□□□□□ -2.08
CSF1YLR087C TY1A-DR2Q03964 440 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C SEC13Q04491 297 aaKnown RBP2.06□□□□□ -2.08
CSF1YLR087C YOR292CQ08743 309 aa2.06□□□□□ -2.08
CSF1YLR087C RPS13P05756 151 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C MATALPHA1P0CY06 175 aa2.05□□□□□ -2.08
CSF1YLR087C HMLALPHA1P0CY07 175 aa2.05□□□□□ -2.08
CSF1YLR087C YBR285WP38354 144 aa2.05□□□□□ -2.08
CSF1YLR087C RPS20P38701 121 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C YGL262WP53054 175 aa2.05□□□□□ -2.08
CSF1YLR087C TMA23Q03525 211 aa2.05□□□□□ -2.08
CSF1YLR087C TAH1P25638 111 aaPredicted RBP2.05□□□□□ -2.08
CSF1YLR087C PAU16P35994 123 aa2.05□□□□□ -2.08
CSF1YLR087C MIX23P38162 196 aa2.05□□□□□ -2.08
CSF1YLR087C TSL1P38427 1098 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C SMX2P40204 77 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C MDM34P53083 459 aa2.05□□□□□ -2.08
CSF1YLR087C YIL102C-AQ2V2P5 75 aa2.05□□□□□ -2.08
CSF1YLR087C RPS31P05759 152 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C RPL40AP0CH08 128 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C RPL40BP0CH09 128 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C MTC7P32633 139 aa2.05□□□□□ -2.08
CSF1YLR087C TIS11P47977 285 aa2.05□□□□□ -2.08
CSF1YLR087C UBC11P52492 156 aa2.05□□□□□ -2.08
CSF1YLR087C YML083CQ04526 418 aa2.05□□□□□ -2.08
CSF1YLR087C YOL114CQ12322 202 aa2.05□□□□□ -2.08
CSF1YLR087C COX11P19516 300 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C MTR2P34232 184 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C SFK1P35735 353 aa2.05□□□□□ -2.08
CSF1YLR087C SAF1P38352 637 aa2.05□□□□□ -2.08
CSF1YLR087C HAC1P41546 238 aa2.05□□□□□ -2.08
CSF1YLR087C YJR111CP47148 283 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C TEX1P53851 422 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C SCO1P23833 295 aa2.05□□□□□ -2.08
CSF1YLR087C EMC5P40540 141 aa2.05□□□□□ -2.08
CSF1YLR087C YFL064CP43540 174 aa2.05□□□□□ -2.08
CSF1YLR087C FMP41P53889 259 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C SRP21P32342 167 aa2.05□□□□□ -2.08
CSF1YLR087C VEL1P53058 206 aa2.05□□□□□ -2.08
CSF1YLR087C RSF1Q05043 376 aa2.05□□□□□ -2.08
CSF1YLR087C YOL131WQ08270 108 aa2.05□□□□□ -2.08
CSF1YLR087C FSF1Q12029 327 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C MRP17P28778 131 aa2.05□□□□□ -2.08
CSF1YLR087C NUD1P32336 851 aa2.05□□□□□ -2.08
CSF1YLR087C RPB7P34087 171 aa2.05□□□□□ -2.08
CSF1YLR087C ERG26P53199 349 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C YGR079WP53249 370 aa2.05□□□□□ -2.08
CSF1YLR087C YLR346CQ06139 101 aa2.05□□□□□ -2.08
CSF1YLR087C LEU9Q12166 604 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C RPL7BQ12213 244 aaKnown RBP2.05□□□□□ -2.08
CSF1YLR087C TY1A-NL1Q12391 440 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms