RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W ERS1P17261 260 aa5.56□□□□□ -1.52
GEF1YJR040W NUP1P20676 1076 aa5.56□□□□□ -1.52
GEF1YJR040W TRS65P32893 560 aa5.56□□□□□ -1.52
GEF1YJR040W SLC1P33333 303 aa5.56□□□□□ -1.52
GEF1YJR040W WSS1P38838 269 aa5.56□□□□□ -1.52
GEF1YJR040W CUP9P41817 306 aa5.56□□□□□ -1.52
GEF1YJR040W SCW4P53334 386 aaKnown RBP5.56□□□□□ -1.52
GEF1YJR040W SMX3P54999 86 aaPredicted RBP5.56□□□□□ -1.52
GEF1YJR040W CAB5Q03941 241 aa5.56□□□□□ -1.52
GEF1YJR040W ATG39Q06159 398 aa5.56□□□□□ -1.52
GEF1YJR040W SYM1Q06563 197 aa5.56□□□□□ -1.52
GEF1YJR040W HNT3Q08702 217 aa5.56□□□□□ -1.52
GEF1YJR040W YOR032W-AQ8TGS1 66 aa5.56□□□□□ -1.52
GEF1YJR040W TDH3P00359 332 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
GEF1YJR040W GPX1P36014 167 aa5.56□□□□□ -1.52
GEF1YJR040W OM14P38325 134 aa5.56□□□□□ -1.52
GEF1YJR040W CDC40P40968 455 aaPredicted RBP5.56□□□□□ -1.52
GEF1YJR040W ATG27P46989 271 aa5.56□□□□□ -1.52
GEF1YJR040W SKP1P52286 194 aa5.56□□□□□ -1.52
GEF1YJR040W YGR017WP53210 297 aa5.56□□□□□ -1.52
GEF1YJR040W TRS23Q03784 219 aa5.56□□□□□ -1.52
GEF1YJR040W SNA4Q07549 140 aa5.56□□□□□ -1.52
GEF1YJR040W YCT1Q12235 531 aa5.56□□□□□ -1.52
GEF1YJR040W ERV2Q12284 196 aa5.56□□□□□ -1.52
GEF1YJR040W SAL1D6W196 494 aa5.55□□□□□ -1.52
GEF1YJR040W OPI3P05375 206 aa5.55□□□□□ -1.52
GEF1YJR040W UTR5P32630 166 aa5.55□□□□□ -1.52
GEF1YJR040W UMP1P38293 148 aa5.55□□□□□ -1.52
GEF1YJR040W RPS26AP39938 119 aaKnown RBP5.55□□□□□ -1.52
GEF1YJR040W RPS26BP39939 119 aaKnown RBP5.55□□□□□ -1.52
GEF1YJR040W BUD8P41698 603 aa5.55□□□□□ -1.52
GEF1YJR040W YFR054CP43622 192 aa5.55□□□□□ -1.52
GEF1YJR040W MTM1P53320 366 aa5.55□□□□□ -1.52
GEF1YJR040W PET191Q02772 108 aa5.55□□□□□ -1.52
GEF1YJR040W RCE1Q03530 315 aa5.55□□□□□ -1.52
GEF1YJR040W MRPL51Q06090 140 aaPredicted RBP5.55□□□□□ -1.52
GEF1YJR040W MCH1Q07376 486 aa5.55□□□□□ -1.52
GEF1YJR040W CSM4Q08955 156 aa5.55□□□□□ -1.52
GEF1YJR040W OLE1P21147 510 aaKnown RBP5.54□□□□□ -1.52
GEF1YJR040W MEK1P24719 497 aaPredicted RBP5.54□□□□□ -1.52
GEF1YJR040W PPA2P28239 310 aa5.54□□□□□ -1.52
GEF1YJR040W TRR1P29509 319 aaKnown RBP5.54□□□□□ -1.52
GEF1YJR040W ERG3P32353 365 aa5.54□□□□□ -1.52
GEF1YJR040W TCA17P32613 152 aa5.54□□□□□ -1.52
GEF1YJR040W YBR220CP38318 560 aa5.54□□□□□ -1.52
GEF1YJR040W PRE3P38624 215 aa5.54□□□□□ -1.52
GEF1YJR040W RPF1P38805 295 aaKnown RBP5.54□□□□□ -1.52
GEF1YJR040W YEL057CP39983 233 aa5.54□□□□□ -1.52
GEF1YJR040W THG1P53215 237 aaKnown RBP5.54□□□□□ -1.52
GEF1YJR040W HED1Q03937 162 aa5.54□□□□□ -1.52
GEF1YJR040W PAU23Q07987 124 aa5.54□□□□□ -1.52
GEF1YJR040W PAU17Q12370 124 aa5.54□□□□□ -1.52
GEF1YJR040W TAD3Q9URQ3 322 aa5.54□□□□□ -1.52
GEF1YJR040W MSW1P04803 379 aa5.54□□□□□ -1.52
GEF1YJR040W NHP6AP11632 93 aaKnown RBP5.54□□□□□ -1.52
GEF1YJR040W CTA1P15202 515 aa5.54□□□□□ -1.52
GEF1YJR040W LDB16P25587 256 aa5.54□□□□□ -1.52
GEF1YJR040W ARO4P32449 370 aaKnown RBP5.54□□□□□ -1.52
GEF1YJR040W YHR180WP38868 163 aa5.54□□□□□ -1.52
GEF1YJR040W PEX7P39108 375 aa5.54□□□□□ -1.52
GEF1YJR040W YEA4P40004 342 aa5.54□□□□□ -1.52
GEF1YJR040W MIC26P50087 233 aa5.54□□□□□ -1.52
GEF1YJR040W HRD1Q08109 551 aa5.54□□□□□ -1.52
GEF1YJR040W SLO1Q3E784 85 aa5.54□□□□□ -1.52
GEF1YJR040W Q0144Q9ZZW2 109 aa5.54□□□□□ -1.52
GEF1YJR040W RPP2AP05319 106 aaKnown RBP5.53□□□□□ -1.52
GEF1YJR040W DAT1P13483 248 aaKnown RBP5.53□□□□□ -1.52
GEF1YJR040W EMP70P32802 667 aa5.53□□□□□ -1.52
GEF1YJR040W YKR073CP36153 106 aa5.53□□□□□ -1.52
GEF1YJR040W LOC1P43586 204 aaPredicted RBP5.53□□□□□ -1.52
GEF1YJR040W ALG9P53868 555 aaKnown RBP5.53□□□□□ -1.52
GEF1YJR040W YOL024WQ08172 172 aa5.53□□□□□ -1.52
GEF1YJR040W ENB1Q08299 606 aa5.53□□□□□ -1.52
GEF1YJR040W MCP1Q12106 302 aa5.53□□□□□ -1.52
GEF1YJR040W POR1P04840 283 aaKnown RBP5.53□□□□□ -1.52
GEF1YJR040W AGA2P32781 87 aa5.53□□□□□ -1.52
GEF1YJR040W AME1P38313 324 aa5.53□□□□□ -1.52
GEF1YJR040W SLM6P38343 150 aa5.53□□□□□ -1.52
GEF1YJR040W MPP6P53725 186 aaPredicted RBP5.53□□□□□ -1.52
GEF1YJR040W CUZ1P53899 274 aa5.53□□□□□ -1.52
GEF1YJR040W FSH2Q05015 223 aa5.53□□□□□ -1.52
GEF1YJR040W VAM3Q12241 283 aa5.53□□□□□ -1.52
GEF1YJR040W MCT1Q12283 360 aa5.53□□□□□ -1.52
GEF1YJR040W NOP1P15646 327 aaKnown RBP5.52□□□□□ -1.53
GEF1YJR040W ARO2P28777 376 aaKnown RBP5.52□□□□□ -1.53
GEF1YJR040W FIG1P38224 298 aa5.52□□□□□ -1.53
GEF1YJR040W YJL193WP39542 402 aa5.52□□□□□ -1.53
GEF1YJR040W ERJ5P43613 295 aaPredicted RBP5.52□□□□□ -1.53
GEF1YJR040W YJR115WP47152 169 aa5.52□□□□□ -1.53
GEF1YJR040W TNA1P53322 534 aa5.52□□□□□ -1.53
GEF1YJR040W YOR376WQ08900 122 aa5.52□□□□□ -1.53
GEF1YJR040W MES1P00958 751 aaKnown RBP5.52□□□□□ -1.53
GEF1YJR040W ARF1P11076 181 aaKnown RBP5.52□□□□□ -1.53
GEF1YJR040W LSM2P38203 95 aaKnown RBP5.52□□□□□ -1.53
GEF1YJR040W SNO3P43544 222 aa5.52□□□□□ -1.53
GEF1YJR040W RIB4P50861 169 aaPredicted RBP5.52□□□□□ -1.53
GEF1YJR040W HHT1P61830 136 aa5.52□□□□□ -1.53
GEF1YJR040W YDL157CQ12082 118 aa5.52□□□□□ -1.53
GEF1YJR040W RLM1Q12224 676 aa5.52□□□□□ -1.53
GEF1YJR040W TPT1Q12272 230 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 91.7 ms