RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B PRM4Q12498 284 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B SCEIP03882 235 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B URA6P15700 204 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B MRPL44P19956 98 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B IMP3P32899 183 aaPredicted RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B SUI1P32911 108 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B CLG1P35190 452 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YBR209WP38311 105 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B OM14P38325 134 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B TRR2P38816 342 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B IKI1P38874 309 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YER135CP40082 130 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B PGD1P40356 397 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B VMA21P41806 77 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YFR054CP43622 192 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B ALG9P53868 555 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B YDR248CQ03786 193 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B EMI1Q04406 187 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YML096WQ04489 525 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YHC1Q05900 231 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B RFM1Q12192 310 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B RLM1Q12224 676 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B PRP46Q12417 451 aaPredicted RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B YPL119C-AQ3E751 87 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B MES1P00958 751 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B DSF1P0CX08 502 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YNR073CP0CX09 502 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B PHO85P17157 305 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B TOM40P23644 387 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B YKL187CP34231 750 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B URA8P38627 578 aaPredicted RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B PTH1P38876 190 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B KRE9P39005 276 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YNL194CP40169 301 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B PRE5P40302 234 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B GAB1P41733 394 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YJR154WP47181 346 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B YIP1P53039 248 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B VBA1Q04301 562 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B FIT1Q04433 528 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B UPS1Q05776 175 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B SNX3Q08826 162 aaKnown RBP1.33□□□□□ -2.2
YGR109W-BYGR109W-B RMD5Q12508 421 aa1.33□□□□□ -2.2
YGR109W-BYGR109W-B SRP21P32342 167 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B RAD23P32628 398 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B APS1P35181 156 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B DOG2P38773 246 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B LSM4P40070 187 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B PRM5P40476 318 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B AVT7P40501 490 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B ARC15P40518 154 aaRIP-Chip data1.32□□□□□ -2.2not detected
YGR109W-BYGR109W-B RPR2P40571 144 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B SNN1P48232 102 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YNR048WP53740 393 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B INN1P53901 409 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B SPC24Q04477 213 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B GRX8Q05926 109 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B STP3Q05937 343 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B ZEO1Q08245 113 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YOR387CQ08910 206 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B TIR4Q12218 487 aaPredicted RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B SPE4Q12455 300 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B COA6Q3E846 104 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B ISD11Q6Q560 94 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B BI3Q9ZZW7 517 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B RPL31AP0C2H8 113 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B OAC1P32332 324 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B SPS19P32573 292 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B YBL059WP34224 193 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B GAT2P40209 560 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YJL118WP47022 219 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YGL118CP53132 145 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B RCE1Q03530 315 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YMR090WQ04304 227 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B CDD1Q06549 142 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B AYT1Q12226 474 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B DET1Q99288 334 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B CAP2P13517 287 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B CKA2P19454 339 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B CPR4P25334 318 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B PUP3P25451 205 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B TIR2P33890 251 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B MTR2P34232 184 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B YET1P35723 206 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YOR062CP36025 268 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B RCN1P36054 211 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B MRPL15P36523 253 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B GPI18P38211 433 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YBR285WP38354 144 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YAL037WP39728 267 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B EMC4P53073 190 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YGL193CP53097 103 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B SAY1P53324 424 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B GOR1P53839 350 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B SWP1Q02795 286 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B NGL3Q03210 505 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B YBL008W-AQ3E821 79 aa1.32□□□□□ -2.2
YGR109W-BYGR109W-B MDN1Q12019 4910 aaKnown RBP1.32□□□□□ -2.2
YGR109W-BYGR109W-B SEC4P07560 215 aaKnown RBP1.31□□□□□ -2.2
YGR109W-BYGR109W-B TIR1P10863 254 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms