RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	INO2	P26798	304 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	SPS18	P32572	300 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	PPQ1	P32945	549 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	RPA43	P46669	326 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	UBP8	P50102	471 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	CAB5	Q03941	241 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	RTT103	Q05543	409 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	ALG6	Q12001	544 aa	Known RBP	10.17	□□□□□ -0.78
NPL3	YDR432W	YPR108W-A	Q3E7B3	70 aa		10.17	□□□□□ -0.78
NPL3	YDR432W	RPS8A	P0CX39	200 aa	Known RBP	10.16	□□□□□ -0.78
NPL3	YDR432W	RPS8B	P0CX40	200 aa	Known RBP	10.16	□□□□□ -0.78
NPL3	YDR432W	FUS3	P16892	353 aa	Known RBP	10.16	□□□□□ -0.78
NPL3	YDR432W	YCR016W	P25617	290 aa	Known RBP	10.16	□□□□□ -0.78
NPL3	YDR432W	MRP17	P28778	131 aa		10.16	□□□□□ -0.78
NPL3	YDR432W	PRS4	P38063	326 aa	Predicted RBP	10.16	□□□□□ -0.78
NPL3	YDR432W	SSO2	P39926	295 aa		10.16	□□□□□ -0.78
NPL3	YDR432W	BMT5	P40493	336 aa		10.16	□□□□□ -0.78
NPL3	YDR432W	CWC25	P53854	179 aa	Known RBP	10.16	□□□□□ -0.78
NPL3	YDR432W	YDR415C	Q04033	374 aa	Predicted RBP	10.16	□□□□□ -0.78
NPL3	YDR432W	FEX1	Q08913	375 aa		10.16	□□□□□ -0.78
NPL3	YDR432W	SAR1	P20606	190 aa	Known RBP	10.15	□□□□□ -0.78
NPL3	YDR432W	UTP30	P36144	274 aa	Known RBP	10.15	□□□□□ -0.78
NPL3	YDR432W	THI74	Q04083	370 aa		10.15	□□□□□ -0.78
NPL3	YDR432W	DPB4	Q04603	196 aa	Known RBP	10.15	□□□□□ -0.78
NPL3	YDR432W	JID1	Q12350	301 aa		10.15	□□□□□ -0.78
NPL3	YDR432W	MRPL23	Q12487	163 aa	Predicted RBP	10.15	□□□□□ -0.78
NPL3	YDR432W	HUG1	Q6Q5K6	68 aa		10.15	□□□□□ -0.78
NPL3	YDR432W	LSB5	P25369	354 aa		10.14	□□□□□ -0.79
NPL3	YDR432W	RPD3	P32561	433 aa		10.14	□□□□□ -0.79
NPL3	YDR432W	POP2	P39008	433 aa		10.14	□□□□□ -0.79
NPL3	YDR432W	MRPL22	P53881	309 aa		10.14	□□□□□ -0.79
NPL3	YDR432W	ARG80	P07249	177 aa		10.13	□□□□□ -0.79
NPL3	YDR432W	YUH1	P35127	236 aa		10.13	□□□□□ -0.79
NPL3	YDR432W	YKL075C	P36083	450 aa		10.13	□□□□□ -0.79
NPL3	YDR432W	YGR210C	P42942	411 aa		10.13	□□□□□ -0.79
NPL3	YDR432W	RPA34	P47006	233 aa	Predicted RBP	10.13	□□□□□ -0.79
NPL3	YDR432W	NIF3	P53081	288 aa		10.13	□□□□□ -0.79
NPL3	YDR432W	SMX3	P54999	86 aa	Predicted RBP	10.13	□□□□□ -0.79
NPL3	YDR432W	YOR292C	Q08743	309 aa		10.13	□□□□□ -0.79
NPL3	YDR432W	LAS17	Q12446	633 aa		10.13	□□□□□ -0.79
NPL3	YDR432W	GCN3	P14741	305 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	OLE1	P21147	510 aa	Known RBP	10.12	□□□□□ -0.79
NPL3	YDR432W	MRP20	P32387	263 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	REC104	P33323	182 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	IKI1	P38874	309 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	10.12	□□□□□ -0.79	not detected
NPL3	YDR432W	PCL7	P40186	285 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	ASM4	Q05166	528 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	HOR7	Q05827	59 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	YLR122C	Q12312	125 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	YOS1	Q3E834	85 aa		10.12	□□□□□ -0.79
NPL3	YDR432W	VMA8	P32610	256 aa	Known RBP	10.11	□□□□□ -0.79
NPL3	YDR432W	VPS55	P47111	140 aa		10.11	□□□□□ -0.79
NPL3	YDR432W	MEH1	Q02205	184 aa		10.11	□□□□□ -0.79
NPL3	YDR432W	LPP1	Q04396	274 aa		10.11	□□□□□ -0.79
NPL3	YDR432W	YDL086W	Q07505	273 aa		10.11	□□□□□ -0.79
NPL3	YDR432W	YFH1	Q07540	174 aa		10.11	□□□□□ -0.79
NPL3	YDR432W	TFB5	Q3E7C1	72 aa	Predicted RBP	10.11	□□□□□ -0.79
NPL3	YDR432W	TPI1	P00942	248 aa	Known RBP	10.1	□□□□□ -0.79
NPL3	YDR432W	PUT1	P09368	476 aa		10.1	□□□□□ -0.79
NPL3	YDR432W	SRY1	P36007	326 aa		10.1	□□□□□ -0.79
NPL3	YDR432W	RPL9B	P51401	191 aa	Known RBP	10.1	□□□□□ -0.79
NPL3	YDR432W	QCR2	P07257	368 aa		10.09	□□□□□ -0.79
NPL3	YDR432W	SUA5	P32579	426 aa		10.09	□□□□□ -0.79
NPL3	YDR432W	LAG1	P38703	411 aa		10.09	□□□□□ -0.79
NPL3	YDR432W	RRF1	P38771	230 aa		10.09	□□□□□ -0.79
NPL3	YDR432W	PHM8	P40025	321 aa		10.09	□□□□□ -0.79
NPL3	YDR432W	YJL213W	P40896	331 aa		10.09	□□□□□ -0.79
NPL3	YDR432W	YLR125W	Q12138	136 aa		10.09	□□□□□ -0.79
NPL3	YDR432W	IRC24	P40580	263 aa		10.08	□□□□□ -0.8
NPL3	YDR432W	PRM4	Q12498	284 aa		10.07	□□□□□ -0.8
NPL3	YDR432W	YBR144C	P34215	104 aa		10.06	□□□□□ -0.8
NPL3	YDR432W	YER137C	P40083	148 aa	Known RBP	10.06	□□□□□ -0.8
NPL3	YDR432W	YIR035C	P40579	254 aa		10.06	□□□□□ -0.8
NPL3	YDR432W	VPS28	Q02767	242 aa		10.06	□□□□□ -0.8
NPL3	YDR432W	RPL9A	P05738	191 aa	Known RBP	10.05	□□□□□ -0.8
NPL3	YDR432W	YHR212W-A	P0CX91	67 aa		10.05	□□□□□ -0.8
NPL3	YDR432W	CKS1	P20486	150 aa	Known RBP	10.05	□□□□□ -0.8
NPL3	YDR432W	TIP1	P27654	210 aa	Predicted RBP	10.05	□□□□□ -0.8
NPL3	YDR432W	MCH1	Q07376	486 aa		10.05	□□□□□ -0.8
NPL3	YDR432W	PRM3	Q08931	133 aa		10.05	□□□□□ -0.8
NPL3	YDR432W	ROX3	P25046	220 aa		10.04	□□□□□ -0.8
NPL3	YDR432W	ACB1	P31787	87 aa		10.04	□□□□□ -0.8
NPL3	YDR432W	YCT1	Q12235	531 aa		10.04	□□□□□ -0.8
NPL3	YDR432W	YJR112W-A	Q3E743	109 aa		10.04	□□□□□ -0.8
NPL3	YDR432W	YMR31	P19955	123 aa		10.03	□□□□□ -0.8
NPL3	YDR432W	MRS4	P23500	304 aa		10.03	□□□□□ -0.8
NPL3	YDR432W	SRL3	P36167	246 aa		10.03	□□□□□ -0.8
NPL3	YDR432W	WWM1	P43582	211 aa	Known RBP	10.03	□□□□□ -0.8
NPL3	YDR432W	GPP2	P40106	250 aa	Known RBP	10.02	□□□□□ -0.81
NPL3	YDR432W	RRT7	Q07829	113 aa		10.02	□□□□□ -0.81
NPL3	YDR432W	ATG5	Q12380	294 aa		10.02	□□□□□ -0.81
NPL3	YDR432W	BOL1	Q3E793	110 aa		10.02	□□□□□ -0.81
NPL3	YDR432W	YPC1	P38298	316 aa		10.01	□□□□□ -0.81
NPL3	YDR432W	ERV15	P38312	142 aa		10.01	□□□□□ -0.81
NPL3	YDR432W	NDE2	Q07500	545 aa		10.01	□□□□□ -0.81
NPL3	YDR432W	YOL029C	Q08187	201 aa		10.01	□□□□□ -0.81
NPL3	YDR432W	RFC2	P40348	353 aa		10	□□□□□ -0.81
NPL3	YDR432W	YJL163C	P46996	555 aa		10	□□□□□ -0.81
NPL3	YDR432W	YJR012C	P47087	207 aa		10	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms