RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR001W	YCR001W	RPL27A	P0C2H6	136 aa	Known RBP	0.5	□□□□□ -2.33
YCR001W	YCR001W	ATP15	P21306	62 aa		0.5	□□□□□ -2.33
YCR001W	YCR001W	PTM1	P32857	523 aa		0.5	□□□□□ -2.33
YCR001W	YCR001W	MSN4	P33749	630 aa		0.5	□□□□□ -2.33
YCR001W	YCR001W	YPL073C	P40323	161 aa		0.5	□□□□□ -2.33
YCR001W	YCR001W	YFH7	P43591	353 aa		0.5	□□□□□ -2.33
YCR001W	YCR001W	YGR050C	P53231	118 aa		0.5	□□□□□ -2.33
YCR001W	YCR001W	YFR032C-B	Q8TGU2	87 aa		0.5	□□□□□ -2.33
YCR001W	YCR001W	INO80	P53115	1489 aa		0.49	□□□□□ -2.33
YCR001W	YCR001W	RPB3	P16370	318 aa	Known RBP	0.49	□□□□□ -2.33
YCR001W	YCR001W	MGM101	P32787	269 aa	Known RBP	0.49	□□□□□ -2.33
YCR001W	YCR001W	RRN5	Q02983	363 aa		0.49	□□□□□ -2.33
YCR001W	YCR001W	YMR252C	Q04814	134 aa		0.49	□□□□□ -2.33
YCR001W	YCR001W	YPR174C	Q06616	221 aa	Predicted RBP	0.49	□□□□□ -2.33
YCR001W	YCR001W	YRA1	Q12159	226 aa	Known RBP	0.49	□□□□□ -2.33
YCR001W	YCR001W	YHR214C-E	Q8TGK0	99 aa		0.49	□□□□□ -2.33
YCR001W	YCR001W	PRP8	P33334	2413 aa	Known RBP	0.49	□□□□□ -2.33
YCR001W	YCR001W	RPL28	P02406	149 aa	Known RBP	0.48	□□□□□ -2.33
YCR001W	YCR001W	RHO1	P06780	209 aa	Known RBP	0.48	□□□□□ -2.33
YCR001W	YCR001W	VMA6	P32366	345 aa	Known RBP	0.48	□□□□□ -2.33
YCR001W	YCR001W	TVP23	P38962	199 aa		0.48	□□□□□ -2.33
YCR001W	YCR001W	LCL2	Q08045	131 aa		0.48	□□□□□ -2.33
YCR001W	YCR001W	SEC4	P07560	215 aa	Known RBP	0.47	□□□□□ -2.33
YCR001W	YCR001W	YMR31	P19955	123 aa		0.47	□□□□□ -2.33
YCR001W	YCR001W	SPO13	P23624	291 aa		0.47	□□□□□ -2.33
YCR001W	YCR001W	YCL042W	P25572	119 aa		0.47	□□□□□ -2.33
YCR001W	YCR001W	MIC12	P38341	106 aa		0.47	□□□□□ -2.33
YCR001W	YCR001W	MPC3	P53311	146 aa		0.47	□□□□□ -2.33
YCR001W	YCR001W	THP2	O13539	261 aa	Known RBP	0.46	□□□□□ -2.34
YCR001W	YCR001W	GCN3	P14741	305 aa		0.46	□□□□□ -2.34
YCR001W	YCR001W	CKS1	P20486	150 aa	Known RBP	0.46	□□□□□ -2.34
YCR001W	YCR001W	STP22	P25604	385 aa		0.46	□□□□□ -2.34
YCR001W	YCR001W	ECM4	P36156	370 aa		0.46	□□□□□ -2.34
YCR001W	YCR001W	CDC36	P06100	191 aa	Predicted RBP	0.45	□□□□□ -2.34
YCR001W	YCR001W	RPL24B	P24000	155 aa	Known RBP	0.45	□□□□□ -2.34
YCR001W	YCR001W	YEL008W	P40001	126 aa		0.45	□□□□□ -2.34
YCR001W	YCR001W	PET191	Q02772	108 aa		0.45	□□□□□ -2.34
YCR001W	YCR001W	DGA1	Q08650	418 aa		0.45	□□□□□ -2.34
YCR001W	YCR001W	RPL25	P04456	142 aa	Known RBP	0.44	□□□□□ -2.34
YCR001W	YCR001W	PRX1	P34227	261 aa	Known RBP	0.44	□□□□□ -2.34
YCR001W	YCR001W	HPA3	P39979	161 aa		0.44	□□□□□ -2.34
YCR001W	YCR001W	YEA4	P40004	342 aa		0.44	□□□□□ -2.34
YCR001W	YCR001W	YER085C	P40058	173 aa		0.44	□□□□□ -2.34
YCR001W	YCR001W	COG5	P53951	403 aa		0.44	□□□□□ -2.34
YCR001W	YCR001W	ODC2	Q99297	307 aa		0.44	□□□□□ -2.34
YCR001W	YCR001W	IKI3	Q06706	1349 aa	Known RBP	0.43	□□□□□ -2.34
YCR001W	YCR001W	POR1	P04840	283 aa	Known RBP	0.43	□□□□□ -2.34
YCR001W	YCR001W	MAG1	P22134	296 aa	Known RBP	0.43	□□□□□ -2.34
YCR001W	YCR001W	PPA2	P28239	310 aa		0.43	□□□□□ -2.34
YCR001W	YCR001W	YHL018W	P38744	120 aa	Predicted RBP	0.43	□□□□□ -2.34
YCR001W	YCR001W	ADO1	P47143	340 aa	Known RBP	0.43	□□□□□ -2.34
YCR001W	YCR001W	PDR17	P53844	350 aa		0.43	□□□□□ -2.34
YCR001W	YCR001W	LSM7	P53905	115 aa	Known RBP	0.43	□□□□□ -2.34
YCR001W	YCR001W	YLR460C	P54007	376 aa		0.43	□□□□□ -2.34
YCR001W	YCR001W	DAD4	P69851	72 aa		0.43	□□□□□ -2.34
YCR001W	YCR001W	DIG2	Q03373	323 aa	Known RBP	0.43	□□□□□ -2.34
YCR001W	YCR001W	YNG1	Q08465	219 aa		0.43	□□□□□ -2.34
YCR001W	YCR001W	JLP1	Q12358	412 aa		0.43	□□□□□ -2.34
YCR001W	YCR001W	YBR121C-A	P0C5L4	52 aa		0.42	□□□□□ -2.34
YCR001W	YCR001W	RTC3	P38804	111 aa	Predicted RBP	0.42	□□□□□ -2.34
YCR001W	YCR001W	IRC18	P47056	224 aa		0.42	□□□□□ -2.34
YCR001W	YCR001W	GET1	P53192	235 aa		0.42	□□□□□ -2.34
YCR001W	YCR001W	HNT1	Q04344	158 aa	Known RBP	0.42	□□□□□ -2.34
YCR001W	YCR001W	COA3	Q3E7B2	85 aa		0.42	□□□□□ -2.34
YCR001W	YCR001W	SEY1	Q99287	776 aa		0.42	□□□□□ -2.34
YCR001W	YCR001W	RPB7	P34087	171 aa		0.41	□□□□□ -2.34
YCR001W	YCR001W	AIM25	P47140	327 aa		0.41	□□□□□ -2.34
YCR001W	YCR001W	MGA1	P53050	456 aa		0.41	□□□□□ -2.34
YCR001W	YCR001W	PRP11	Q07350	266 aa	Predicted RBP	0.41	□□□□□ -2.34
YCR001W	YCR001W	YKL183C-A	Q3E765	70 aa		0.41	□□□□□ -2.34
YCR001W	YCR001W	OCH1	P31755	480 aa		0.4	□□□□□ -2.35
YCR001W	YCR001W	UGX2	P32772	223 aa		0.4	□□□□□ -2.35
YCR001W	YCR001W	PAN3	P36102	679 aa	Predicted RBP	0.4	□□□□□ -2.35
YCR001W	YCR001W	ERG28	P40030	148 aa		0.4	□□□□□ -2.35
YCR001W	YCR001W	HMF1	P40037	129 aa	Known RBP	0.4	□□□□□ -2.35
YCR001W	YCR001W	UPS3	Q04006	179 aa		0.4	□□□□□ -2.35
YCR001W	YCR001W	IRC23	Q08416	157 aa		0.4	□□□□□ -2.35
YCR001W	YCR001W	FIT2	Q08906	153 aa		0.4	□□□□□ -2.35
YCR001W	YCR001W	COX8	P04039	78 aa		0.39	□□□□□ -2.35
YCR001W	YCR001W	MER1	P16523	270 aa		0.39	□□□□□ -2.35
YCR001W	YCR001W	YCR090C	P25654	182 aa	Known RBP	0.39	□□□□□ -2.35
YCR001W	YCR001W	TRM5	P38793	499 aa		0.39	□□□□□ -2.35
YCR001W	YCR001W	YRB1	P41920	201 aa	Known RBP	0.39	□□□□□ -2.35
YCR001W	YCR001W	UBC12	P52491	188 aa		0.39	□□□□□ -2.35
YCR001W	YCR001W	RNH202	Q05635	350 aa		0.39	□□□□□ -2.35
YCR001W	YCR001W	MDM32	Q12171	622 aa		0.39	□□□□□ -2.35
YCR001W	YCR001W	MRPL15	P36523	253 aa		0.38	□□□□□ -2.35
YCR001W	YCR001W	YNL194C	P40169	301 aa		0.38	□□□□□ -2.35
YCR001W	YCR001W	ERG10	P41338	398 aa	Known RBP	0.38	□□□□□ -2.35
YCR001W	YCR001W	YDR391C	Q04170	232 aa		0.38	□□□□□ -2.35
YCR001W	YCR001W	YPR013C	Q12145	317 aa		0.38	□□□□□ -2.35
YCR001W	YCR001W	THG1	P53215	237 aa	Known RBP	0.37	□□□□□ -2.35
YCR001W	YCR001W	YDR157W	A0A023PZE8	133 aa		0.36	□□□□□ -2.35
YCR001W	YCR001W	NHP6B	P11633	99 aa	Known RBP	0.36	□□□□□ -2.35
YCR001W	YCR001W	PHO85	P17157	305 aa		0.36	□□□□□ -2.35
YCR001W	YCR001W	SPS18	P32572	300 aa		0.36	□□□□□ -2.35
YCR001W	YCR001W	CBT1	P36038	271 aa	Predicted RBP	0.36	□□□□□ -2.35
YCR001W	YCR001W	RTR1	P40084	226 aa	Predicted RBP	0.36	□□□□□ -2.35
YCR001W	YCR001W	YMR099C	Q03161	297 aa	Known RBP	0.36	□□□□□ -2.35
YCR001W	YCR001W	YMR295C	Q03559	197 aa		0.36	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms