RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeastyeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDS1YBR029C MIG1P27705 504 aa3.89□□□□□ -1.79
CDS1YBR029C YPT52P36018 234 aaKnown RBP3.89□□□□□ -1.79
CDS1YBR029C PDR17P53844 350 aa3.89□□□□□ -1.79
CDS1YBR029C RTC4P53850 401 aa3.89□□□□□ -1.79
CDS1YBR029C RSM10Q03201 203 aa3.89□□□□□ -1.79
CDS1YBR029C NIP7Q08962 181 aaKnown RBP3.89□□□□□ -1.79
CDS1YBR029C QCR6P00127 147 aa3.88□□□□□ -1.79
CDS1YBR029C GCN3P14741 305 aa3.88□□□□□ -1.79
CDS1YBR029C RPF1P38805 295 aaKnown RBP3.88□□□□□ -1.79
CDS1YBR029C YAR068WP39564 161 aa3.88□□□□□ -1.79
CDS1YBR029C FAR7P43592 221 aa3.88□□□□□ -1.79
CDS1YBR029C PEX12Q04370 399 aa3.88□□□□□ -1.79
CDS1YBR029C TUS1Q06412 1307 aa3.87□□□□□ -1.79
CDS1YBR029C OAC1P32332 324 aa3.87□□□□□ -1.79
CDS1YBR029C YBR063CP38083 404 aa3.87□□□□□ -1.79
CDS1YBR029C DOG2P38773 246 aa3.87□□□□□ -1.79
CDS1YBR029C DOG1P38774 246 aa3.87□□□□□ -1.79
CDS1YBR029C YHR125WP38831 101 aa3.87□□□□□ -1.79
CDS1YBR029C SPO73P40031 143 aa3.87□□□□□ -1.79
CDS1YBR029C YER188WP40103 239 aa3.87□□□□□ -1.79
CDS1YBR029C TIF34P40217 347 aaKnown RBP3.87□□□□□ -1.79
CDS1YBR029C YJL144WP47009 104 aa3.87□□□□□ -1.79
CDS1YBR029C PRM8P53174 237 aa3.87□□□□□ -1.79
CDS1YBR029C YMR279CQ03263 540 aa3.87□□□□□ -1.79
CDS1YBR029C ATG39Q06159 398 aa3.87□□□□□ -1.79
CDS1YBR029C FAB1P34756 2278 aa3.87□□□□□ -1.79
CDS1YBR029C DPM1P14020 267 aaKnown RBP3.86□□□□□ -1.79
CDS1YBR029C APS1P35181 156 aa3.86□□□□□ -1.79
CDS1YBR029C BMT5P40493 336 aa3.86□□□□□ -1.79
CDS1YBR029C YRB2P40517 327 aa3.86□□□□□ -1.79
CDS1YBR029C YJL016WP47072 561 aa3.86□□□□□ -1.79
CDS1YBR029C SSU72P53538 206 aaPredicted RBP3.86□□□□□ -1.79
CDS1YBR029C TLG1Q03322 224 aa3.86□□□□□ -1.79
CDS1YBR029C SMD2Q06217 110 aaKnown RBP3.86□□□□□ -1.79
CDS1YBR029C Q0255P03881 472 aa3.85□□□□□ -1.79
CDS1YBR029C YCR087C-AP37263 153 aa3.85□□□□□ -1.79
CDS1YBR029C YJR056CP47115 236 aa3.85□□□□□ -1.79
CDS1YBR029C YGR026WP53217 278 aa3.85□□□□□ -1.79
CDS1YBR029C DID2P69771 204 aa3.85□□□□□ -1.79
CDS1YBR029C YHR139C-AO13536 103 aa3.84□□□□□ -1.79
CDS1YBR029C SPS18P32572 300 aa3.84□□□□□ -1.79
CDS1YBR029C VMA11P32842 164 aa3.84□□□□□ -1.79
CDS1YBR029C TRM5P38793 499 aa3.84□□□□□ -1.79
CDS1YBR029C COG3P40094 801 aa3.84□□□□□ -1.79
CDS1YBR029C RPA43P46669 326 aa3.84□□□□□ -1.79
CDS1YBR029C NOP19P53317 196 aaPredicted RBP3.84□□□□□ -1.79
CDS1YBR029C MYO1P08964 1928 aa3.84□□□□□ -1.79
CDS1YBR029C GAA1P39012 614 aa3.83□□□□□ -1.8
CDS1YBR029C SUE1Q06524 206 aa3.83□□□□□ -1.8
CDS1YBR029C DAS2Q12084 232 aa3.83□□□□□ -1.8
CDS1YBR029C YPR170W-BP0C5R9 85 aa3.82□□□□□ -1.8
CDS1YBR029C MER1P16523 270 aa3.82□□□□□ -1.8
CDS1YBR029C CCA1P21269 546 aa3.82□□□□□ -1.8
CDS1YBR029C SDH4P37298 181 aa3.82□□□□□ -1.8
CDS1YBR029C GRE3P38715 327 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CDS1YBR029C FUS2Q05670 677 aa3.82□□□□□ -1.8
CDS1YBR029C CLP1Q08685 445 aaPredicted RBP3.82□□□□□ -1.8
CDS1YBR029C YCL012CQ8J0M4 134 aa3.82□□□□□ -1.8
CDS1YBR029C YHR032W-AP0C5N6 59 aa3.81□□□□□ -1.8
CDS1YBR029C LPP1Q04396 274 aa3.81□□□□□ -1.8
CDS1YBR029C RDS3Q06835 107 aaPredicted RBP3.81□□□□□ -1.8
CDS1YBR029C MDM32Q12171 622 aa3.81□□□□□ -1.8
CDS1YBR029C TEL1P38110 2787 aa3.81□□□□□ -1.8
CDS1YBR029C QCR7P00128 127 aa3.8□□□□□ -1.8
CDS1YBR029C CUP1-1P0CX80 61 aa3.8□□□□□ -1.8
CDS1YBR029C CUP1-2P0CX81 61 aa3.8□□□□□ -1.8
CDS1YBR029C ECM33P38248 429 aaKnown RBP3.8□□□□□ -1.8
CDS1YBR029C SNZ1Q03148 297 aa3.8□□□□□ -1.8
CDS1YBR029C CDC8P00572 216 aa3.79□□□□□ -1.8
CDS1YBR029C YHL026CP38740 315 aa3.79□□□□□ -1.8
CDS1YBR029C RMD6P39975 231 aa3.79□□□□□ -1.8
CDS1YBR029C HOP2P53187 214 aa3.79□□□□□ -1.8
CDS1YBR029C RPL26AP05743 127 aaKnown RBP3.78□□□□□ -1.8
CDS1YBR029C ATG22P25568 528 aa3.78□□□□□ -1.8
CDS1YBR029C SCM4P32564 187 aa3.78□□□□□ -1.8
CDS1YBR029C MRPL28P36527 147 aa3.78□□□□□ -1.8
CDS1YBR029C IRC22P40006 225 aa3.78□□□□□ -1.8
CDS1YBR029C DSK2P48510 373 aa3.78□□□□□ -1.8
CDS1YBR029C RPL26BP53221 127 aaKnown RBP3.78□□□□□ -1.8
CDS1YBR029C CDD1Q06549 142 aa3.78□□□□□ -1.8
CDS1YBR029C AKR2Q12013 749 aa3.78□□□□□ -1.8
CDS1YBR029C APA2P22108 325 aa3.77□□□□□ -1.81
CDS1YBR029C ASF2P32448 525 aaPredicted RBP3.77□□□□□ -1.81
CDS1YBR029C YIL001WP40560 513 aa3.77□□□□□ -1.81
CDS1YBR029C MMS2P53152 137 aa3.77□□□□□ -1.81
CDS1YBR029C CAB4P53332 305 aa3.77□□□□□ -1.81
CDS1YBR029C APJ1P53940 528 aa3.77□□□□□ -1.81
CDS1YBR029C YDR278CQ05612 105 aa3.77□□□□□ -1.81
CDS1YBR029C MHT1Q12525 324 aa3.77□□□□□ -1.81
CDS1YBR029C TDA8Q6B2U8 126 aa3.77□□□□□ -1.81
CDS1YBR029C RPL25P04456 142 aaKnown RBP3.76□□□□□ -1.81
CDS1YBR029C RPL9AP05738 191 aaKnown RBP3.76□□□□□ -1.81
CDS1YBR029C SKG1P36169 355 aa3.76□□□□□ -1.81
CDS1YBR029C RPL9BP51401 191 aaKnown RBP3.76□□□□□ -1.81
CDS1YBR029C YNL010WP53981 241 aaKnown RBP3.76□□□□□ -1.81
CDS1YBR029C YPL225WQ08971 146 aaKnown RBP3.76□□□□□ -1.81
CDS1YBR029C GPM2Q12008 311 aa3.76□□□□□ -1.81
CDS1YBR029C AST2P39945 430 aaKnown RBP3.76□□□□□ -1.81
CDS1YBR029C SNX4P47057 423 aa3.76□□□□□ -1.81
CDS1YBR029C SLM2P53955 656 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms