RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 YDR415CQ04033 374 aaPredicted RBP11.93□□□□□ -0.5
SCR1SCR1 JID1Q12350 301 aa11.93□□□□□ -0.5
SCR1SCR1 HUG1Q6Q5K6 68 aa11.93□□□□□ -0.5
SCR1SCR1 YHR138CP38841 114 aaPredicted RBP11.92□□□□□ -0.5
SCR1SCR1 CAB5Q03941 241 aa11.92□□□□□ -0.5
SCR1SCR1 SPG4Q04438 115 aa11.92□□□□□ -0.5
SCR1SCR1 PHO92Q06390 306 aa11.92□□□□□ -0.5
SCR1SCR1 POP8P38208 133 aa11.91□□□□□ -0.5
SCR1SCR1 RDI1Q12434 202 aa11.91□□□□□ -0.5
SCR1SCR1 BOL1Q3E793 110 aa11.91□□□□□ -0.5
SCR1SCR1 YKL075CP36083 450 aa11.9□□□□□ -0.5
SCR1SCR1 COS8P38723 381 aa11.9□□□□□ -0.5
SCR1SCR1 RTT103Q05543 409 aa11.9□□□□□ -0.5
SCR1SCR1 YCP4P25349 247 aaKnown RBP11.89□□□□□ -0.51
SCR1SCR1 GPG1P53130 126 aa11.89□□□□□ -0.51
SCR1SCR1 YNG1Q08465 219 aa11.89□□□□□ -0.51
SCR1SCR1 MRPL3P36516 390 aa11.88□□□□□ -0.51
SCR1SCR1 IRC24P40580 263 aa11.88□□□□□ -0.51
SCR1SCR1 THI74Q04083 370 aa11.88□□□□□ -0.51
SCR1SCR1 HBN1Q96VH4 193 aa11.88□□□□□ -0.51
SCR1SCR1 VPS63O13549 108 aa11.87□□□□□ -0.51
SCR1SCR1 PRS4P38063 326 aaPredicted RBP11.87□□□□□ -0.51
SCR1SCR1 MSE1P48525 536 aa11.87□□□□□ -0.51
SCR1SCR1 PEX10Q05568 337 aa11.87□□□□□ -0.51
SCR1SCR1 TRM13Q12383 476 aa11.87□□□□□ -0.51
SCR1SCR1 SPS2P08459 502 aa11.86□□□□□ -0.51
SCR1SCR1 OLE1P21147 510 aaKnown RBP11.85□□□□□ -0.51
SCR1SCR1 PHM8P40025 321 aa11.85□□□□□ -0.51
SCR1SCR1 ARO8P53090 500 aaKnown RBP11.85□□□□□ -0.51
SCR1SCR1 NRG1Q03125 231 aa11.85□□□□□ -0.51
SCR1SCR1 NHP6BP11633 99 aaKnown RBP11.84□□□□□ -0.51
SCR1SCR1 INO2P26798 304 aa11.84□□□□□ -0.51
SCR1SCR1 YDL086WQ07505 273 aa11.84□□□□□ -0.51
SCR1SCR1 PAM18Q07914 168 aa11.84□□□□□ -0.51
SCR1SCR1 QCR2P07257 368 aa11.83□□□□□ -0.52
SCR1SCR1 LSM12P38828 187 aaKnown RBP11.83□□□□□ -0.52
SCR1SCR1 ATG31Q12421 196 aa11.83□□□□□ -0.52
SCR1SCR1 YCR016WP25617 290 aaKnown RBP11.82□□□□□ -0.52
SCR1SCR1 GEP4P38812 185 aa11.82□□□□□ -0.52
SCR1SCR1 YJL213WP40896 331 aa11.82□□□□□ -0.52
SCR1SCR1 MCH1Q07376 486 aa11.82□□□□□ -0.52
SCR1SCR1 HTB1P02293 131 aaKnown RBP11.81□□□□□ -0.52
SCR1SCR1 YBR242WP38331 238 aa11.81□□□□□ -0.52
SCR1SCR1 RFC2P40348 353 aa11.81□□□□□ -0.52
SCR1SCR1 YKE4P40544 346 aa11.81□□□□□ -0.52
SCR1SCR1 YJL163CP46996 555 aa11.8□□□□□ -0.52
SCR1SCR1 UBP8P50102 471 aa11.8□□□□□ -0.52
SCR1SCR1 NIF3P53081 288 aa11.8□□□□□ -0.52
SCR1SCR1 HOR7Q05827 59 aa11.8□□□□□ -0.52
SCR1SCR1 NDE2Q07500 545 aa11.8□□□□□ -0.52
SCR1SCR1 AEP3Q12089 606 aa11.8□□□□□ -0.52
SCR1SCR1 PRM4Q12498 284 aa11.8□□□□□ -0.52
SCR1SCR1 MRP17P28778 131 aa11.79□□□□□ -0.52
SCR1SCR1 SUA5P32579 426 aa11.79□□□□□ -0.52
SCR1SCR1 GLY1P37303 387 aaKnown RBP11.79□□□□□ -0.52
SCR1SCR1 ERV15P38312 142 aa11.79□□□□□ -0.52
SCR1SCR1 AGE2P40529 298 aa11.79□□□□□ -0.52
SCR1SCR1 BFR1P38934 470 aaKnown RBP RIP-Chip data11.78□□□□□ -0.52not detected
SCR1SCR1 VPS55P47111 140 aa11.78□□□□□ -0.52
SCR1SCR1 FSH2Q05015 223 aa11.78□□□□□ -0.52
SCR1SCR1 YCT1Q12235 531 aa11.78□□□□□ -0.52
SCR1SCR1 ATP3P38077 311 aaKnown RBP11.77□□□□□ -0.53
SCR1SCR1 GPP2P40106 250 aaKnown RBP11.77□□□□□ -0.53
SCR1SCR1 ERG25P53045 309 aa11.77□□□□□ -0.53
SCR1SCR1 MRPL23Q12487 163 aaPredicted RBP11.77□□□□□ -0.53
SCR1SCR1 MSN1P22148 382 aa11.76□□□□□ -0.53
SCR1SCR1 SSU72P53538 206 aaPredicted RBP11.76□□□□□ -0.53
SCR1SCR1 RKI1Q12189 258 aa11.76□□□□□ -0.53
SCR1SCR1 TFB5Q3E7C1 72 aaPredicted RBP11.76□□□□□ -0.53
SCR1SCR1 TRP4P07285 380 aaPredicted RBP11.75□□□□□ -0.53
SCR1SCR1 NOP1P15646 327 aaKnown RBP11.75□□□□□ -0.53
SCR1SCR1 FIP1P45976 327 aa11.75□□□□□ -0.53
SCR1SCR1 MRPS16Q02608 121 aa11.75□□□□□ -0.53
SCR1SCR1 ENV7Q12003 364 aa11.75□□□□□ -0.53
SCR1SCR1 YKR045CP36138 183 aa11.74□□□□□ -0.53
SCR1SCR1 RPL13BP40212 199 aaKnown RBP11.74□□□□□ -0.53
SCR1SCR1 RPA43P46669 326 aa11.74□□□□□ -0.53
SCR1SCR1 HED1Q03937 162 aa11.74□□□□□ -0.53
SCR1SCR1 RPL13AQ12690 199 aaPredicted RBP11.74□□□□□ -0.53
SCR1SCR1 YJR112W-AQ3E743 109 aa11.74□□□□□ -0.53
SCR1SCR1 ARP3P47117 449 aaKnown RBP11.73□□□□□ -0.53
SCR1SCR1 YGL258W-AQ3E740 77 aa11.73□□□□□ -0.53
SCR1SCR1 RPD3P32561 433 aa11.72□□□□□ -0.53
SCR1SCR1 RTC3P38804 111 aaPredicted RBP11.72□□□□□ -0.53
SCR1SCR1 WWM1P43582 211 aaKnown RBP11.72□□□□□ -0.53
SCR1SCR1 PRM3Q08931 133 aa11.72□□□□□ -0.53
SCR1SCR1 ARG80P07249 177 aa11.71□□□□□ -0.53
SCR1SCR1 YPC1P38298 316 aa11.71□□□□□ -0.53
SCR1SCR1 YBR184WP38299 523 aa11.71□□□□□ -0.53
SCR1SCR1 YJR012CP47087 207 aa11.71□□□□□ -0.53
SCR1SCR1 VPS28Q02767 242 aa11.71□□□□□ -0.53
SCR1SCR1 FEX2Q08991 375 aa11.71□□□□□ -0.53
SCR1SCR1 RAD28Q12021 506 aa11.71□□□□□ -0.53
SCR1SCR1 ATG5Q12380 294 aa11.71□□□□□ -0.53
SCR1SCR1 TPI1P00942 248 aaKnown RBP11.7□□□□□ -0.54
SCR1SCR1 PUT1P09368 476 aa11.7□□□□□ -0.54
SCR1SCR1 YBR255C-AQ3E776 120 aa11.7□□□□□ -0.54
SCR1SCR1 LST8P41318 303 aa11.69□□□□□ -0.54
SCR1SCR1 NPL6P32832 435 aa11.68□□□□□ -0.54
SCR1SCR1 MRPL38P35996 138 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms