RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 BRE4Q07660 1125 aa2.07□□□□□ -2.08
snR47snR47 FRA1Q07825 749 aa2.07□□□□□ -2.08
snR47snR47 MMP1Q12372 583 aa2.07□□□□□ -2.08
snR47snR47 SAC7P17121 654 aa2.06□□□□□ -2.08
snR47snR47 MRPL16P38064 232 aa2.06□□□□□ -2.08
snR47snR47 TOS1P38288 455 aa2.06□□□□□ -2.08
snR47snR47 MAM3Q12296 706 aa2.06□□□□□ -2.08
snR47snR47 YLR122CQ12312 125 aa2.06□□□□□ -2.08
snR47snR47 NHA1Q99271 985 aa2.06□□□□□ -2.08
snR47snR47 YPT53P36019 220 aa2.05□□□□□ -2.08
snR47snR47 KAE1P36132 386 aa2.05□□□□□ -2.08
snR47snR47 MSC7P38694 644 aa2.05□□□□□ -2.08
snR47snR47 SPR3P41901 512 aa2.05□□□□□ -2.08
snR47snR47 NUP42P49686 430 aaKnown RBP2.05□□□□□ -2.08
snR47snR47 MAG2Q06436 670 aaKnown RBP2.05□□□□□ -2.08
snR47snR47 ATG20Q07528 640 aa2.04□□□□□ -2.08
snR47snR47 ESC8Q08119 714 aa2.04□□□□□ -2.08
snR47snR47 TEC1P18412 486 aa2.03□□□□□ -2.08
snR47snR47 YJU3P28321 313 aa2.03□□□□□ -2.08
snR47snR47 GLN1P32288 370 aaKnown RBP2.03□□□□□ -2.08
snR47snR47 IRE1P32361 1115 aa2.03□□□□□ -2.08
snR47snR47 COQ2P32378 372 aa2.03□□□□□ -2.08
snR47snR47 SFA1P32771 386 aa2.03□□□□□ -2.08
snR47snR47 IES2P40154 320 aa2.03□□□□□ -2.08
snR47snR47 NIT1P40447 199 aa2.03□□□□□ -2.08
snR47snR47 JJJ2P46997 583 aa2.03□□□□□ -2.08
snR47snR47 WTM2Q12206 467 aa2.03□□□□□ -2.08
snR47snR47 TAD3Q9URQ3 322 aa2.03□□□□□ -2.08
snR47snR47 ESS1P22696 170 aa2.02□□□□□ -2.09
snR47snR47 PGM2P37012 569 aaKnown RBP2.02□□□□□ -2.09
snR47snR47 SHM1P37292 490 aaPredicted RBP2.02□□□□□ -2.09
snR47snR47 PSH1Q12161 406 aa2.02□□□□□ -2.09
snR47snR47 MCM16Q12262 181 aa2.02□□□□□ -2.09
snR47snR47 STB3Q12427 513 aa2.02□□□□□ -2.09
snR47snR47 SPT2P06843 333 aaPredicted RBP2.01□□□□□ -2.09
snR47snR47 PDC6P26263 563 aaKnown RBP2.01□□□□□ -2.09
snR47snR47 ALG14P38242 237 aa2.01□□□□□ -2.09
snR47snR47 CKB1P43639 278 aa2.01□□□□□ -2.09
snR47snR47 GAS5Q08193 484 aa2.01□□□□□ -2.09
snR47snR47 DSF2P38213 736 aa2□□□□□ -2.09
snR47snR47 TAF1P46677 1066 aa2□□□□□ -2.09
snR47snR47 RPP1AP05318 106 aaPredicted RBP1.99□□□□□ -2.09
snR47snR47 NAR1P23503 491 aaKnown RBP1.99□□□□□ -2.09
snR47snR47 SEG2P34250 1132 aa1.99□□□□□ -2.09
snR47snR47 SAF1P38352 637 aa1.99□□□□□ -2.09
snR47snR47 GIP4P39732 760 aa1.99□□□□□ -2.09
snR47snR47 SUM1P46676 1062 aa1.99□□□□□ -2.09
snR47snR47 GIS4Q04233 774 aa1.99□□□□□ -2.09
snR47snR47 HDA2Q06629 674 aa1.99□□□□□ -2.09
snR47snR47 LEU1P07264 779 aaKnown RBP1.98□□□□□ -2.09
snR47snR47 GUT2P32191 649 aa1.98□□□□□ -2.09
snR47snR47 YGR130CP53278 816 aa1.98□□□□□ -2.09
snR47snR47 RPS31P05759 152 aaKnown RBP1.97□□□□□ -2.09
snR47snR47 RRM3P38766 723 aa1.97□□□□□ -2.09
snR47snR47 CHS2P14180 963 aa1.96□□□□□ -2.1
snR47snR47 DIT2P21595 489 aa1.96□□□□□ -2.1
snR47snR47 UTR2P32623 467 aa1.96□□□□□ -2.1
snR47snR47 NGR1P32831 672 aaKnown RBP1.96□□□□□ -2.1
snR47snR47 UTP7P40055 554 aaKnown RBP1.96□□□□□ -2.1
snR47snR47 SPO74P45819 413 aa1.96□□□□□ -2.1
snR47snR47 CYC7P00045 113 aa1.95□□□□□ -2.1
snR47snR47 NAB2P32505 525 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
snR47snR47 LRG1P35688 1017 aa1.95□□□□□ -2.1
snR47snR47 SEA4P38164 1038 aa1.95□□□□□ -2.1
snR47snR47 PRK1P40494 810 aa1.95□□□□□ -2.1
snR47snR47 ALA1P40825 983 aaKnown RBP1.95□□□□□ -2.1
snR47snR47 ALD2P47771 506 aa1.95□□□□□ -2.1
snR47snR47 ECL1P48235 211 aa1.95□□□□□ -2.1
snR47snR47 HEH2Q03281 663 aa1.95□□□□□ -2.1
snR47snR47 DAT1P13483 248 aaKnown RBP1.94□□□□□ -2.1
snR47snR47 RSC6P25632 483 aa1.94□□□□□ -2.1
snR47snR47 RGP1P16664 663 aa1.93□□□□□ -2.1
snR47snR47 TBS1P38114 1094 aa1.93□□□□□ -2.1
snR47snR47 APL6P46682 809 aa1.93□□□□□ -2.1
snR47snR47 PUF3Q07807 879 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
snR47snR47 ARG8P18544 423 aa1.92□□□□□ -2.1
snR47snR47 KTR1P27810 393 aaKnown RBP1.92□□□□□ -2.1
snR47snR47 THI80P35202 319 aa1.92□□□□□ -2.1
snR47snR47 SLX8P40072 274 aa1.92□□□□□ -2.1
snR47snR47 PRP43P53131 767 aaKnown RBP1.92□□□□□ -2.1
snR47snR47 PKH3Q03306 898 aaPredicted RBP1.92□□□□□ -2.1
snR47snR47 TSA1P34760 196 aaKnown RBP1.91□□□□□ -2.1
snR47snR47 STE20Q03497 939 aaKnown RBP1.91□□□□□ -2.1
snR47snR47 GSF2Q04697 403 aaKnown RBP1.91□□□□□ -2.1
snR47snR47 YPQ2Q06328 317 aa1.91□□□□□ -2.1
snR47snR47 CDA2Q06703 312 aa1.91□□□□□ -2.1
snR47snR47 TY1A-NL1Q12391 440 aaKnown RBP1.91□□□□□ -2.1
snR47snR47 FLR1P38124 548 aa1.9□□□□□ -2.11
snR47snR47 ISR1Q06098 443 aaKnown RBP1.9□□□□□ -2.11
snR47snR47 SLP1Q12232 587 aa1.9□□□□□ -2.11
snR47snR47 DFG16Q99234 619 aa1.9□□□□□ -2.11
snR47snR47 MSB1P21339 1137 aaKnown RBP1.89□□□□□ -2.11
snR47snR47 GAS1P22146 559 aaKnown RBP1.89□□□□□ -2.11
snR47snR47 NAM7P30771 971 aaKnown RBP1.89□□□□□ -2.11
snR47snR47 POL12P38121 705 aaPredicted RBP1.89□□□□□ -2.11
snR47snR47 MRX12P47084 519 aa1.89□□□□□ -2.11
snR47snR47 HAL5P38970 855 aaKnown RBP1.88□□□□□ -2.11
snR47snR47 AKR1P39010 764 aa1.88□□□□□ -2.11
snR47snR47 REC8Q12188 680 aa1.88□□□□□ -2.11
snR47snR47 RAD59Q12223 238 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms