RNA–Protein interactions for RNA: YPL119C

DBP1, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP1, Length 1,854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP1	YPL119C	SER1	P33330	395 aa	Known RBP	11.38	□□□□□ -0.59
DBP1	YPL119C	PHM7	Q12252	991 aa		11.38	□□□□□ -0.59
DBP1	YPL119C	PDR18	P53756	1333 aa		11.37	□□□□□ -0.59
DBP1	YPL119C	DCD1	P06773	312 aa		11.37	□□□□□ -0.59
DBP1	YPL119C	CLC1	P17891	233 aa		11.37	□□□□□ -0.59
DBP1	YPL119C	VPS24	P36095	224 aa	Known RBP	11.37	□□□□□ -0.59
DBP1	YPL119C	TEA1	P47988	759 aa		11.37	□□□□□ -0.59
DBP1	YPL119C	YLR271W	Q06152	274 aa		11.37	□□□□□ -0.59
DBP1	YPL119C	PSH1	Q12161	406 aa		11.37	□□□□□ -0.59
DBP1	YPL119C	SSF1	P38789	453 aa	Predicted RBP	11.36	□□□□□ -0.59
DBP1	YPL119C	YIL055C	P40523	627 aa	Known RBP	11.36	□□□□□ -0.59
DBP1	YPL119C	ITC1	P53125	1264 aa		11.36	□□□□□ -0.59
DBP1	YPL119C	NOT3	P06102	836 aa	Known RBP	11.36	□□□□□ -0.59
DBP1	YPL119C	ECM21	P38167	1117 aa	Known RBP	11.36	□□□□□ -0.59
DBP1	YPL119C	SET1	P38827	1080 aa	Known RBP	11.36	□□□□□ -0.59
DBP1	YPL119C	MDG1	P53885	366 aa		11.36	□□□□□ -0.59
DBP1	YPL119C	SRS2	P12954	1174 aa		11.35	□□□□□ -0.59
DBP1	YPL119C	SNF7	P39929	240 aa	Known RBP	11.34	□□□□□ -0.59
DBP1	YPL119C	RPN11	P43588	306 aa	Known RBP	11.34	□□□□□ -0.59
DBP1	YPL119C	YJL181W	P46987	611 aa		11.34	□□□□□ -0.59
DBP1	YPL119C	PRP40	P33203	583 aa	Known RBP	11.33	□□□□□ -0.6
DBP1	YPL119C	YGL242C	P53066	181 aa		11.32	□□□□□ -0.6
DBP1	YPL119C	FPR4	Q06205	392 aa	Predicted RBP	11.32	□□□□□ -0.6
DBP1	YPL119C	ROX1	P25042	368 aa		11.32	□□□□□ -0.6
DBP1	YPL119C	MLC1	P53141	149 aa		11.32	□□□□□ -0.6
DBP1	YPL119C	ALO1	P54783	526 aa	Known RBP	11.32	□□□□□ -0.6
DBP1	YPL119C	KTR3	P38130	404 aa	Predicted RBP	11.31	□□□□□ -0.6
DBP1	YPL119C	MRPS35	P53292	345 aa		11.31	□□□□□ -0.6
DBP1	YPL119C	RIM20	Q12033	661 aa		11.31	□□□□□ -0.6
DBP1	YPL119C	MSB4	Q12317	492 aa		11.31	□□□□□ -0.6
DBP1	YPL119C	DUR1,2	P32528	1835 aa	Known RBP	11.31	□□□□□ -0.6
DBP1	YPL119C	SUP35	P05453	685 aa	Known RBP	11.3	□□□□□ -0.6
DBP1	YPL119C	KRI1	P42846	591 aa	Known RBP	11.3	□□□□□ -0.6
DBP1	YPL119C	BRE1	Q07457	700 aa	Known RBP	11.3	□□□□□ -0.6
DBP1	YPL119C	GRE2	Q12068	342 aa	Known RBP	11.29	□□□□□ -0.6
DBP1	YPL119C	LSP1	Q12230	341 aa	Known RBP	11.29	□□□□□ -0.6
DBP1	YPL119C	UTP10	P42945	1769 aa	Known RBP	11.29	□□□□□ -0.6
DBP1	YPL119C	SNU66	Q12420	587 aa	Predicted RBP	11.29	□□□□□ -0.6
DBP1	YPL119C	RNR2	P09938	399 aa	Known RBP	11.27	□□□□□ -0.6
DBP1	YPL119C	MSP1	P28737	362 aa		11.27	□□□□□ -0.6
DBP1	YPL119C	AAP1	P37898	856 aa	Known RBP	11.27	□□□□□ -0.6
DBP1	YPL119C	YGL081W	P53156	320 aa		11.27	□□□□□ -0.6
DBP1	YPL119C	MTC5	Q03897	1148 aa		11.27	□□□□□ -0.6
DBP1	YPL119C	NYV1	Q12255	253 aa		11.27	□□□□□ -0.6
DBP1	YPL119C	SSK22	P25390	1331 aa	Predicted RBP	11.27	□□□□□ -0.61
DBP1	YPL119C	AI2	P03876	854 aa		11.27	□□□□□ -0.61
DBP1	YPL119C	TRL1	P09880	827 aa	Known RBP	11.27	□□□□□ -0.61
DBP1	YPL119C	PIB2	P53191	635 aa		11.27	□□□□□ -0.61
DBP1	YPL119C	VPS20	Q04272	221 aa		11.27	□□□□□ -0.61
DBP1	YPL119C	GYP5	Q12344	894 aa		11.27	□□□□□ -0.61
DBP1	YPL119C	NPA3	P47122	385 aa		11.25	□□□□□ -0.61
DBP1	YPL119C	SEC18	P18759	758 aa	Known RBP	11.25	□□□□□ -0.61
DBP1	YPL119C	KTR1	P27810	393 aa	Known RBP	11.25	□□□□□ -0.61
DBP1	YPL119C	NPR2	P39923	615 aa		11.25	□□□□□ -0.61
DBP1	YPL119C	STM1	P39015	273 aa	Known RBP	11.24	□□□□□ -0.61
DBP1	YPL119C	UBP16	Q02863	499 aa		11.24	□□□□□ -0.61
DBP1	YPL119C	PBY1	P38254	753 aa		11.23	□□□□□ -0.61
DBP1	YPL119C	ARL1	P38116	183 aa	Known RBP	11.23	□□□□□ -0.61
DBP1	YPL119C	RPN7	Q06103	429 aa	Known RBP	11.23	□□□□□ -0.61
DBP1	YPL119C	YNL193W	P53870	558 aa		11.22	□□□□□ -0.61
DBP1	YPL119C	CTI6	Q08923	506 aa		11.21	□□□□□ -0.61
DBP1	YPL119C	HAT1	Q12341	374 aa		11.21	□□□□□ -0.61
DBP1	YPL119C	SLN1	P39928	1220 aa	Predicted RBP	11.21	□□□□□ -0.62
DBP1	YPL119C	CWH41	P53008	833 aa		11.2	□□□□□ -0.62
DBP1	YPL119C	EPS1	P40557	701 aa		11.19	□□□□□ -0.62
DBP1	YPL119C	RRI2	Q12348	645 aa		11.19	□□□□□ -0.62
DBP1	YPL119C	SAC3	P46674	1301 aa		11.19	□□□□□ -0.62
DBP1	YPL119C	COG8	Q04632	607 aa		11.19	□□□□□ -0.62
DBP1	YPL119C	YMR074C	Q04773	145 aa		11.19	□□□□□ -0.62
DBP1	YPL119C	BIK1	P11709	440 aa		11.18	□□□□□ -0.62
DBP1	YPL119C	BUG1	Q12191	341 aa		11.18	□□□□□ -0.62
DBP1	YPL119C	AIM9	P40053	627 aa	Known RBP	11.17	□□□□□ -0.62
DBP1	YPL119C	LYS4	P49367	693 aa	Predicted RBP	11.17	□□□□□ -0.62
DBP1	YPL119C	UBP1	P25037	809 aa		11.16	□□□□□ -0.62
DBP1	YPL119C	NGR1	P32831	672 aa	Known RBP	11.16	□□□□□ -0.62
DBP1	YPL119C	PGA3	Q12746	312 aa	Known RBP	11.16	□□□□□ -0.62
DBP1	YPL119C	TPM1	P17536	199 aa	Known RBP	11.15	□□□□□ -0.62
DBP1	YPL119C	BDH2	P39713	417 aa		11.15	□□□□□ -0.62
DBP1	YPL119C	YMR147W	P40218	223 aa	Known RBP	11.15	□□□□□ -0.62
DBP1	YPL119C	HAP5	Q02516	242 aa		11.15	□□□□□ -0.62
DBP1	YPL119C	RAT1	Q02792	1006 aa	Known RBP	11.15	□□□□□ -0.62
DBP1	YPL119C	HRQ1	Q05549	1077 aa		11.15	□□□□□ -0.62
DBP1	YPL119C	YPR148C	Q06523	435 aa		11.15	□□□□□ -0.62
DBP1	YPL119C	TSR3	Q12094	313 aa	Known RBP	11.15	□□□□□ -0.62
DBP1	YPL119C	RPL19A	P0CX82	189 aa	Known RBP	11.15	□□□□□ -0.63
DBP1	YPL119C	RPL19B	P0CX83	189 aa	Predicted RBP	11.15	□□□□□ -0.63
DBP1	YPL119C	CIC1	P38779	376 aa	Known RBP	11.15	□□□□□ -0.63
DBP1	YPL119C	ENT3	P47160	408 aa		11.15	□□□□□ -0.63
DBP1	YPL119C	ADR1	P07248	1323 aa		11.14	□□□□□ -0.63
DBP1	YPL119C	VID28	P40547	921 aa		11.14	□□□□□ -0.63
DBP1	YPL119C	ARP5	P53946	755 aa		11.14	□□□□□ -0.63
DBP1	YPL119C	KNS1	P32350	737 aa	Predicted RBP	11.13	□□□□□ -0.63
DBP1	YPL119C	OSH3	P38713	996 aa	Known RBP	11.13	□□□□□ -0.63
DBP1	YPL119C	HST1	P53685	503 aa		11.13	□□□□□ -0.63
DBP1	YPL119C	SRC1	Q03707	834 aa		11.12	□□□□□ -0.63
DBP1	YPL119C	THI3	Q07471	609 aa		11.12	□□□□□ -0.63
DBP1	YPL119C	BUD31	P25337	157 aa	Predicted RBP	11.12	□□□□□ -0.63
DBP1	YPL119C	HAL5	P38970	855 aa	Known RBP	11.12	□□□□□ -0.63
DBP1	YPL119C	SPO22	P40511	975 aa		11.12	□□□□□ -0.63
DBP1	YPL119C	CTF18	P49956	741 aa		11.12	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms