RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	RAD3	P06839	778 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	MAK16	P10962	306 aa	Predicted RBP	4.61	□□□□□ -1.67
HOS3	YPL116W	ELM1	P32801	640 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	COY1	P34237	679 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	SLN1	P39928	1220 aa	Predicted RBP	4.61	□□□□□ -1.67
HOS3	YPL116W	PTP3	P40048	928 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	UBP10	P53874	792 aa	Predicted RBP	4.61	□□□□□ -1.67
HOS3	YPL116W	YNL050C	P53952	270 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	DNM1	P54861	757 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	MSH6	Q03834	1242 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	SPO71	Q03868	1245 aa		4.61	□□□□□ -1.67
HOS3	YPL116W	CFT1	Q06632	1357 aa	Known RBP	4.6	□□□□□ -1.67
HOS3	YPL116W	SIT4	P20604	311 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	FAR1	P21268	830 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	DSL1	P53847	754 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	VTI1	Q04338	217 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	PMT7	Q06644	662 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	YOL057W	Q08225	711 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	TCB1	Q12466	1186 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	RPC31	P17890	251 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	PHO84	P25297	587 aa	Known RBP	4.6	□□□□□ -1.67
HOS3	YPL116W	PNG1	Q02890	363 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	ARR2	Q06597	130 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	SLX4	Q12098	748 aa		4.6	□□□□□ -1.67
HOS3	YPL116W	DBP10	Q12389	995 aa	Known RBP	4.6	□□□□□ -1.67
HOS3	YPL116W	PEP12	P32854	288 aa		4.59	□□□□□ -1.67
HOS3	YPL116W	NUF2	P33895	451 aa		4.59	□□□□□ -1.67
HOS3	YPL116W	TIF3	P34167	436 aa	Known RBP	4.59	□□□□□ -1.67
HOS3	YPL116W	ATG19	P35193	415 aa		4.59	□□□□□ -1.67
HOS3	YPL116W	SEC26	P41810	973 aa	Known RBP	4.59	□□□□□ -1.67
HOS3	YPL116W	RAD17	P48581	401 aa		4.59	□□□□□ -1.67
HOS3	YPL116W	CLB1	P24868	471 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	HIR2	P32480	875 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	NIP100	P33420	868 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	SWH1	P35845	1188 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	UBP13	P38187	747 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	ARB1	P40024	610 aa	Known RBP	4.58	□□□□□ -1.68
HOS3	YPL116W	SHE4	P51534	789 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	VPS20	Q04272	221 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	PEX19	Q07418	342 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	NKP1	Q12493	238 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	TOP2	P06786	1428 aa	Known RBP	4.58	□□□□□ -1.68
HOS3	YPL116W	MMS1	Q06211	1407 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	TSR4	P25040	408 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
HOS3	YPL116W	ACP1	P32463	125 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	RTG2	P32608	588 aa	Known RBP	4.58	□□□□□ -1.68
HOS3	YPL116W	DLD1	P32891	587 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	MEF2	P39677	819 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
HOS3	YPL116W	PEX21	P50091	288 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	ADE12	P80210	433 aa	Known RBP	4.58	□□□□□ -1.68
HOS3	YPL116W	RSM28	Q03430	361 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	ARV1	Q06541	321 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	SEC39	Q12745	709 aa		4.58	□□□□□ -1.68
HOS3	YPL116W	RRN6	P32786	894 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	ETP1	P38748	585 aa	Known RBP	4.57	□□□□□ -1.68
HOS3	YPL116W	NDC80	P40460	691 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	MPH1	P40562	993 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	YIR042C	P40586	236 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	SPO19	Q03029	223 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	TAP42	Q04372	366 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	SSK22	P25390	1331 aa	Predicted RBP	4.57	□□□□□ -1.68
HOS3	YPL116W	KAR1	P11927	433 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	APN1	P22936	367 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	TFC3	P34111	1160 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	RPG1	P38249	964 aa	Known RBP	4.57	□□□□□ -1.68
HOS3	YPL116W	SUM1	P46676	1062 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	RNT1	Q02555	471 aa		4.57	□□□□□ -1.68
HOS3	YPL116W	SSQ1	Q05931	657 aa	Predicted RBP	4.57	□□□□□ -1.68
HOS3	YPL116W	NOT3	P06102	836 aa	Known RBP	4.56	□□□□□ -1.68
HOS3	YPL116W	MER1	P16523	270 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	VMA1	P17255	1071 aa	Known RBP	4.56	□□□□□ -1.68
HOS3	YPL116W	RPB4	P20433	221 aa	Predicted RBP	4.56	□□□□□ -1.68
HOS3	YPL116W	RPN12	P32496	274 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	TTI1	P36097	1038 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	ATG14	P38270	344 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	ERC1	P38767	581 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	CIC1	P38779	376 aa	Known RBP	4.56	□□□□□ -1.68
HOS3	YPL116W	TOM71	P38825	639 aa	Known RBP	4.56	□□□□□ -1.68
HOS3	YPL116W	PET100	P38958	111 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	VPS41	P38959	992 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	SHC1	P39000	512 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	CIN4	P39110	191 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	YER034W	P40022	185 aa	Known RBP	4.56	□□□□□ -1.68
HOS3	YPL116W	TIM54	P47045	478 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	SNZ1	Q03148	297 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	PUF6	Q04373	656 aa	Known RBP	4.56	□□□□□ -1.68
HOS3	YPL116W	MPC54	Q08550	464 aa		4.56	□□□□□ -1.68
HOS3	YPL116W	PDI1	P17967	522 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	STE11	P23561	717 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	RME1	P32338	300 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	SMY1	P32364	656 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	MRE11	P32829	692 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	SAS3	P34218	831 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	YEL1	P34225	687 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	TBS1	P38114	1094 aa		4.55	□□□□□ -1.68
HOS3	YPL116W	OLA1	P38219	394 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	ILV3	P39522	585 aa	Known RBP	4.55	□□□□□ -1.68
HOS3	YPL116W	MSN5	P52918	1224 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms