RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W BDP1P46678 594 aa4.43□□□□□ -1.7
SWI1YPL016W ALD3P54114 506 aa4.43□□□□□ -1.7
SWI1YPL016W PRP3Q03338 469 aaPredicted RBP4.43□□□□□ -1.7
SWI1YPL016W MNN4P36044 1178 aa4.43□□□□□ -1.7
SWI1YPL016W TLG1Q03322 224 aa4.43□□□□□ -1.7
SWI1YPL016W TAP42Q04372 366 aa4.43□□□□□ -1.7
SWI1YPL016W SNU71P53207 620 aaKnown RBP4.42□□□□□ -1.7
SWI1YPL016W SET1P38827 1080 aaKnown RBP4.42□□□□□ -1.7
SWI1YPL016W YDR306CQ06640 478 aa4.42□□□□□ -1.7
SWI1YPL016W MNR2P35724 969 aa4.42□□□□□ -1.7
SWI1YPL016W SRP54P20424 541 aaKnown RBP4.41□□□□□ -1.7
SWI1YPL016W RPC82P32349 654 aa4.41□□□□□ -1.7
SWI1YPL016W OLA1P38219 394 aaKnown RBP4.41□□□□□ -1.7
SWI1YPL016W YJR142WP47173 342 aa4.41□□□□□ -1.7
SWI1YPL016W NNF2P53253 936 aa4.41□□□□□ -1.7
SWI1YPL016W RIX7Q07844 837 aaKnown RBP4.41□□□□□ -1.7
SWI1YPL016W DAL5P15365 543 aa4.41□□□□□ -1.7
SWI1YPL016W ISW1P38144 1129 aa4.41□□□□□ -1.7
SWI1YPL016W RPN1P38764 993 aaKnown RBP4.41□□□□□ -1.7
SWI1YPL016W AIM20P40451 204 aa4.41□□□□□ -1.7
SWI1YPL016W CIR1P42940 261 aa4.41□□□□□ -1.7
SWI1YPL016W TYS1P36421 394 aaKnown RBP4.4□□□□□ -1.7
SWI1YPL016W DAL7P21826 554 aa4.4□□□□□ -1.7
SWI1YPL016W GDT1P38301 280 aaPredicted RBP4.4□□□□□ -1.7
SWI1YPL016W GCD7P32502 381 aaPredicted RBP4.4□□□□□ -1.71
SWI1YPL016W PEA2P40091 420 aa4.4□□□□□ -1.71
SWI1YPL016W TFG1P41895 735 aaPredicted RBP4.39□□□□□ -1.71
SWI1YPL016W ERV41Q04651 352 aa4.39□□□□□ -1.71
SWI1YPL016W DPH5P32469 300 aaPredicted RBP4.39□□□□□ -1.71
SWI1YPL016W YKL068W-AQ3E826 78 aa4.39□□□□□ -1.71
SWI1YPL016W PPH3P32345 308 aa4.38□□□□□ -1.71
SWI1YPL016W LTV1P34078 463 aa4.38□□□□□ -1.71
SWI1YPL016W MPH1P40562 993 aa4.38□□□□□ -1.71
SWI1YPL016W MSH4P40965 878 aaPredicted RBP4.38□□□□□ -1.71
SWI1YPL016W QCR6P00127 147 aa4.38□□□□□ -1.71
SWI1YPL016W MTR4P47047 1073 aaKnown RBP4.38□□□□□ -1.71
SWI1YPL016W NPA3P47122 385 aa4.38□□□□□ -1.71
SWI1YPL016W KTR3P38130 404 aaPredicted RBP4.38□□□□□ -1.71
SWI1YPL016W IPL1P38991 367 aa4.38□□□□□ -1.71
SWI1YPL016W NCR1Q12200 1170 aa4.37□□□□□ -1.71
SWI1YPL016W CHZ1P40019 153 aaPredicted RBP4.37□□□□□ -1.71
SWI1YPL016W HUL5P53119 910 aa4.37□□□□□ -1.71
SWI1YPL016W TIM11P81449 96 aaPredicted RBP4.37□□□□□ -1.71
SWI1YPL016W PLP2Q12017 286 aa4.37□□□□□ -1.71
SWI1YPL016W CLB1P24868 471 aa4.37□□□□□ -1.71
SWI1YPL016W RFC5P38251 354 aa4.37□□□□□ -1.71
SWI1YPL016W ARP5P53946 755 aa4.37□□□□□ -1.71
SWI1YPL016W YDL144CQ07589 356 aa4.37□□□□□ -1.71
SWI1YPL016W YOL036WQ08206 761 aa4.37□□□□□ -1.71
SWI1YPL016W BUD2P33314 1104 aa4.36□□□□□ -1.71
SWI1YPL016W ITC1P53125 1264 aa4.36□□□□□ -1.71
SWI1YPL016W APL5Q08951 932 aaKnown RBP4.36□□□□□ -1.71
SWI1YPL016W INP52P50942 1183 aa4.36□□□□□ -1.71
SWI1YPL016W UBP1P25037 809 aa4.36□□□□□ -1.71
SWI1YPL016W DEP1P31385 405 aa4.36□□□□□ -1.71
SWI1YPL016W SPT16P32558 1035 aaKnown RBP4.36□□□□□ -1.71
SWI1YPL016W SWH1P35845 1188 aa4.36□□□□□ -1.71
SWI1YPL016W YSH1Q06224 779 aaPredicted RBP4.36□□□□□ -1.71
SWI1YPL016W TDA5Q06417 326 aaKnown RBP4.36□□□□□ -1.71
SWI1YPL016W PEX19Q07418 342 aa4.36□□□□□ -1.71
SWI1YPL016W PET111P08468 800 aa4.35□□□□□ -1.71
SWI1YPL016W KEX2P13134 814 aa4.35□□□□□ -1.71
SWI1YPL016W TLG2Q08144 397 aa4.35□□□□□ -1.71
SWI1YPL016W RAD50P12753 1312 aa4.35□□□□□ -1.71
SWI1YPL016W ALD4P46367 519 aaKnown RBP4.35□□□□□ -1.71
SWI1YPL016W HOS3Q02959 697 aaKnown RBP4.35□□□□□ -1.71
SWI1YPL016W SFH1Q06168 426 aa4.35□□□□□ -1.71
SWI1YPL016W RGA2Q06407 1009 aa4.35□□□□□ -1.71
SWI1YPL016W CLN1P20437 546 aa4.35□□□□□ -1.71
SWI1YPL016W YDJ1P25491 409 aaKnown RBP4.35□□□□□ -1.71
SWI1YPL016W POL31P46957 487 aa4.35□□□□□ -1.71
SWI1YPL016W ALD2P47771 506 aa4.35□□□□□ -1.71
SWI1YPL016W HIF1Q12373 385 aa4.35□□□□□ -1.71
SWI1YPL016W ARO80Q04052 950 aa4.34□□□□□ -1.71
SWI1YPL016W PIM1P36775 1133 aa4.34□□□□□ -1.71
SWI1YPL016W SAP1P39955 897 aaKnown RBP4.34□□□□□ -1.71
SWI1YPL016W MSH6Q03834 1242 aa4.34□□□□□ -1.71
SWI1YPL016W RRP15Q06511 250 aaPredicted RBP4.34□□□□□ -1.71
SWI1YPL016W ATG36P46983 293 aa4.34□□□□□ -1.72
SWI1YPL016W YLL054CQ12244 843 aa4.34□□□□□ -1.72
SWI1YPL016W UBR1P19812 1950 aa4.33□□□□□ -1.72
SWI1YPL016W VID30P53076 958 aa4.33□□□□□ -1.72
SWI1YPL016W TIM50Q02776 476 aa4.33□□□□□ -1.72
SWI1YPL016W SEC23P15303 768 aaKnown RBP4.33□□□□□ -1.72
SWI1YPL016W UBX2Q04228 584 aa4.33□□□□□ -1.72
SWI1YPL016W LCD1Q04377 747 aa4.33□□□□□ -1.72
SWI1YPL016W ARR2Q06597 130 aa4.33□□□□□ -1.72
SWI1YPL016W SPE2P21182 396 aa4.32□□□□□ -1.72
SWI1YPL016W BUD31P25337 157 aaPredicted RBP4.32□□□□□ -1.72
SWI1YPL016W CPS1P27614 576 aa4.32□□□□□ -1.72
SWI1YPL016W VPS24P36095 224 aaKnown RBP4.32□□□□□ -1.72
SWI1YPL016W AIM9P40053 627 aaKnown RBP4.32□□□□□ -1.72
SWI1YPL016W NDL1Q06568 189 aa4.32□□□□□ -1.72
SWI1YPL016W RGD1P38339 666 aa4.32□□□□□ -1.72
SWI1YPL016W YGL081WP53156 320 aa4.32□□□□□ -1.72
SWI1YPL016W YPL225WQ08971 146 aaKnown RBP4.32□□□□□ -1.72
SWI1YPL016W VPS41P38959 992 aa4.31□□□□□ -1.72
SWI1YPL016W RAD3P06839 778 aa4.31□□□□□ -1.72
SWI1YPL016W NUF2P33895 451 aa4.31□□□□□ -1.72
SWI1YPL016W LAM1P38851 1228 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms