RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C YGR035CP53222 116 aa7.87□□□□□ -1.15
CLP1YOR250C TIF1P10081 395 aaKnown RBP7.86□□□□□ -1.15
CLP1YOR250C RDS2P19541 446 aaKnown RBP7.86□□□□□ -1.15
CLP1YOR250C MRX10Q05648 414 aa7.86□□□□□ -1.15
CLP1YOR250C SLX8P40072 274 aa7.85□□□□□ -1.15
CLP1YOR250C RPL34BP40525 121 aaKnown RBP7.85□□□□□ -1.15
CLP1YOR250C HDA3Q06623 655 aa7.85□□□□□ -1.15
CLP1YOR250C HIR3P47171 1648 aa7.84□□□□□ -1.15
CLP1YOR250C CCP1P00431 361 aa7.84□□□□□ -1.15
CLP1YOR250C SSN3P39073 555 aa7.84□□□□□ -1.15
CLP1YOR250C NOP2P40991 618 aaKnown RBP7.84□□□□□ -1.15
CLP1YOR250C HPF1Q05164 967 aa7.84□□□□□ -1.15
CLP1YOR250C TRK2P28584 889 aa7.82□□□□□ -1.16
CLP1YOR250C RTG2P32608 588 aaKnown RBP7.82□□□□□ -1.16
CLP1YOR250C SUM1P46676 1062 aa7.82□□□□□ -1.16
CLP1YOR250C ENO1P00924 437 aaKnown RBP7.81□□□□□ -1.16
CLP1YOR250C UBP15P50101 1230 aa7.81□□□□□ -1.16
CLP1YOR250C NAM8Q00539 523 aaKnown RBP7.81□□□□□ -1.16
CLP1YOR250C DPH6Q12429 685 aa7.81□□□□□ -1.16
CLP1YOR250C THO2P53552 1597 aaKnown RBP7.81□□□□□ -1.16
CLP1YOR250C SLA1P32790 1244 aa7.8□□□□□ -1.16
CLP1YOR250C LYS5P50113 272 aa7.8□□□□□ -1.16
CLP1YOR250C YFL034WP43564 1073 aa7.79□□□□□ -1.16
CLP1YOR250C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
CLP1YOR250C REV3P14284 1504 aa7.79□□□□□ -1.16
CLP1YOR250C AHP1P38013 176 aaKnown RBP7.78□□□□□ -1.16
CLP1YOR250C UTP7P40055 554 aaKnown RBP7.78□□□□□ -1.16
CLP1YOR250C SIN3P22579 1536 aa7.78□□□□□ -1.16
CLP1YOR250C PEP12P32854 288 aa7.78□□□□□ -1.16
CLP1YOR250C SIS2P36024 562 aa7.77□□□□□ -1.17
CLP1YOR250C AIM9P40053 627 aaKnown RBP7.77□□□□□ -1.17
CLP1YOR250C YPR204WQ08995 1032 aa7.76□□□□□ -1.17
CLP1YOR250C TY1A-DR3Q12441 440 aa7.76□□□□□ -1.17
CLP1YOR250C SWR1Q05471 1514 aa7.75□□□□□ -1.17
CLP1YOR250C SWI5P08153 709 aa7.75□□□□□ -1.17
CLP1YOR250C ALA1P40825 983 aaKnown RBP7.75□□□□□ -1.17
CLP1YOR250C JJJ2P46997 583 aa7.75□□□□□ -1.17
CLP1YOR250C JJJ3P47138 172 aa7.75□□□□□ -1.17
CLP1YOR250C CUZ1P53899 274 aa7.75□□□□□ -1.17
CLP1YOR250C TSC13Q99190 310 aa7.75□□□□□ -1.17
CLP1YOR250C UFD4P33202 1483 aa7.74□□□□□ -1.17
CLP1YOR250C SSK2P53599 1579 aa7.74□□□□□ -1.17
CLP1YOR250C DMA2P53924 522 aa7.74□□□□□ -1.17
CLP1YOR250C YPQ2Q06328 317 aa7.74□□□□□ -1.17
CLP1YOR250C RPS6AP0CX37 236 aaKnown RBP7.72□□□□□ -1.17
CLP1YOR250C RPS6BP0CX38 236 aaPredicted RBP7.72□□□□□ -1.17
CLP1YOR250C DIT1P21623 536 aa7.72□□□□□ -1.17
CLP1YOR250C MCM1P11746 286 aa7.71□□□□□ -1.18
CLP1YOR250C IRE1P32361 1115 aa7.71□□□□□ -1.18
CLP1YOR250C KOG1P38873 1557 aa7.7□□□□□ -1.18
CLP1YOR250C CEM1P39525 442 aa7.7□□□□□ -1.18
CLP1YOR250C YMR265CQ03508 461 aaKnown RBP7.7□□□□□ -1.18
CLP1YOR250C URN1Q06525 465 aaKnown RBP7.7□□□□□ -1.18
CLP1YOR250C YTA7P40340 1379 aa7.69□□□□□ -1.18
CLP1YOR250C STU1P38198 1513 aa7.69□□□□□ -1.18
CLP1YOR250C NTH2P35172 780 aa7.69□□□□□ -1.18
CLP1YOR250C YDR461C-AQ2V2P7 80 aa7.69□□□□□ -1.18
CLP1YOR250C TAF2P23255 1407 aa7.68□□□□□ -1.18
CLP1YOR250C PDI1P17967 522 aaKnown RBP7.68□□□□□ -1.18
CLP1YOR250C SHM1P37292 490 aaPredicted RBP7.68□□□□□ -1.18
CLP1YOR250C MYO2P19524 1574 aaKnown RBP7.67□□□□□ -1.18
CLP1YOR250C PHO87P25360 923 aa7.67□□□□□ -1.18
CLP1YOR250C SYT1Q06836 1226 aa7.67□□□□□ -1.18
CLP1YOR250C POL1P13382 1468 aa7.66□□□□□ -1.18
CLP1YOR250C HAP4P14064 554 aa7.66□□□□□ -1.18
CLP1YOR250C ESP1Q03018 1630 aa7.66□□□□□ -1.18
CLP1YOR250C TRM732Q03496 1420 aa7.65□□□□□ -1.18
CLP1YOR250C KRE33P53914 1056 aaKnown RBP7.65□□□□□ -1.18
CLP1YOR250C IKI3Q06706 1349 aaKnown RBP7.65□□□□□ -1.19
CLP1YOR250C RPS31P05759 152 aaKnown RBP7.64□□□□□ -1.19
CLP1YOR250C PDC6P26263 563 aaKnown RBP7.64□□□□□ -1.19
CLP1YOR250C GAS4Q08271 471 aa7.64□□□□□ -1.19
CLP1YOR250C PSH1Q12161 406 aa7.64□□□□□ -1.19
CLP1YOR250C CYT1P07143 309 aa7.63□□□□□ -1.19
CLP1YOR250C UBP1P25037 809 aa7.63□□□□□ -1.19
CLP1YOR250C ACS2P52910 683 aaKnown RBP7.63□□□□□ -1.19
CLP1YOR250C SPP41P38904 1435 aa7.63□□□□□ -1.19
CLP1YOR250C ADE12P80210 433 aaKnown RBP7.62□□□□□ -1.19
CLP1YOR250C LEU1P07264 779 aaKnown RBP7.61□□□□□ -1.19
CLP1YOR250C GAL2P13181 574 aa7.61□□□□□ -1.19
CLP1YOR250C TTI1P36097 1038 aa7.61□□□□□ -1.19
CLP1YOR250C KTR7P40504 517 aa7.61□□□□□ -1.19
CLP1YOR250C ICP55P40051 511 aa7.6□□□□□ -1.19
CLP1YOR250C RPP1AP05318 106 aaPredicted RBP7.59□□□□□ -1.19
CLP1YOR250C CAB3P36076 571 aa7.59□□□□□ -1.19
CLP1YOR250C YTA6P40328 754 aa7.59□□□□□ -1.19
CLP1YOR250C MTC5Q03897 1148 aa7.59□□□□□ -1.19
CLP1YOR250C PHM7Q12252 991 aa7.59□□□□□ -1.19
CLP1YOR250C AI1P03875 834 aa7.58□□□□□ -1.2
CLP1YOR250C MRPL16P38064 232 aa7.58□□□□□ -1.2
CLP1YOR250C YNL165WP53891 406 aa7.58□□□□□ -1.2
CLP1YOR250C UTP4Q06679 776 aaKnown RBP7.58□□□□□ -1.2
CLP1YOR250C FPS1P23900 669 aa7.57□□□□□ -1.2
CLP1YOR250C TGL4P36165 910 aa7.57□□□□□ -1.2
CLP1YOR250C BPT1P14772 1559 aa7.56□□□□□ -1.2
CLP1YOR250C NGR1P32831 672 aaKnown RBP7.56□□□□□ -1.2
CLP1YOR250C SPR3P41901 512 aa7.56□□□□□ -1.2
CLP1YOR250C ALD2P47771 506 aa7.56□□□□□ -1.2
CLP1YOR250C STB3Q12427 513 aa7.56□□□□□ -1.2
CLP1YOR250C ECM5Q03214 1411 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms