RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C YRB30P53107 440 aaPredicted RBP4.53□□□□□ -1.68
LCB4YOR171C CDC4P07834 779 aa4.52□□□□□ -1.69
LCB4YOR171C VAN1P23642 535 aa4.52□□□□□ -1.69
LCB4YOR171C SUV3P32580 737 aa4.52□□□□□ -1.69
LCB4YOR171C WTM2Q12206 467 aa4.52□□□□□ -1.69
LCB4YOR171C CYT1P07143 309 aa4.52□□□□□ -1.69
LCB4YOR171C BDS1Q08347 646 aa4.52□□□□□ -1.69
LCB4YOR171C DAT1P13483 248 aaKnown RBP4.51□□□□□ -1.69
LCB4YOR171C ORC1P54784 914 aaPredicted RBP4.51□□□□□ -1.69
LCB4YOR171C PNP1Q05788 311 aa4.51□□□□□ -1.69
LCB4YOR171C TRS33Q99394 268 aa4.51□□□□□ -1.69
LCB4YOR171C SRS2P12954 1174 aa4.5□□□□□ -1.69
LCB4YOR171C TBS1P38114 1094 aa4.5□□□□□ -1.69
LCB4YOR171C PUN1Q06991 263 aa4.5□□□□□ -1.69
LCB4YOR171C AFT1P22149 690 aa4.49□□□□□ -1.69
LCB4YOR171C BOL3P39724 118 aa4.49□□□□□ -1.69
LCB4YOR171C ASH1P34233 588 aa4.49□□□□□ -1.69
LCB4YOR171C RTT106P40161 455 aa4.49□□□□□ -1.69
LCB4YOR171C ALD4P46367 519 aaKnown RBP4.49□□□□□ -1.69
LCB4YOR171C MSB3P48566 633 aaPredicted RBP4.49□□□□□ -1.69
LCB4YOR171C SEN54Q02825 467 aaPredicted RBP4.49□□□□□ -1.69
LCB4YOR171C KAR5Q04746 504 aa4.49□□□□□ -1.69
LCB4YOR171C YPQ2Q06328 317 aa4.49□□□□□ -1.69
LCB4YOR171C YBL113CQ7M4S9 792 aa4.49□□□□□ -1.69
LCB4YOR171C RPP2BP02400 110 aaKnown RBP4.48□□□□□ -1.69
LCB4YOR171C TRL1P09880 827 aaKnown RBP4.48□□□□□ -1.69
LCB4YOR171C NGR1P32831 672 aaKnown RBP4.48□□□□□ -1.69
LCB4YOR171C ERP5P38819 212 aa4.48□□□□□ -1.69
LCB4YOR171C UTP7P40055 554 aaKnown RBP4.48□□□□□ -1.69
LCB4YOR171C UGA3P26370 528 aa4.47□□□□□ -1.69
LCB4YOR171C AAD14P42884 376 aa4.47□□□□□ -1.69
LCB4YOR171C SUM1P46676 1062 aa4.47□□□□□ -1.69
LCB4YOR171C HST3P53687 447 aa4.47□□□□□ -1.69
LCB4YOR171C MCM1P11746 286 aa4.46□□□□□ -1.7
LCB4YOR171C DLD3P39976 496 aaKnown RBP4.46□□□□□ -1.7
LCB4YOR171C YDR444WQ04093 687 aa4.46□□□□□ -1.7
LCB4YOR171C CAB1Q04430 367 aa4.46□□□□□ -1.7
LCB4YOR171C BOI1P38041 980 aaKnown RBP4.45□□□□□ -1.7
LCB4YOR171C MDJ2P42834 146 aa4.45□□□□□ -1.7
LCB4YOR171C CWH41P53008 833 aa4.45□□□□□ -1.7
LCB4YOR171C ATG1P53104 897 aa4.45□□□□□ -1.7
LCB4YOR171C SLD2P34252 453 aa4.45□□□□□ -1.7
LCB4YOR171C GRS1P38088 690 aaKnown RBP4.45□□□□□ -1.7
LCB4YOR171C YBR197CP38306 217 aa4.45□□□□□ -1.7
LCB4YOR171C HXT5P38695 592 aa4.45□□□□□ -1.7
LCB4YOR171C PTK2P47116 818 aaKnown RBP4.45□□□□□ -1.7
LCB4YOR171C FUR4P05316 633 aaKnown RBP4.44□□□□□ -1.7
LCB4YOR171C ARG82P07250 355 aa4.44□□□□□ -1.7
LCB4YOR171C IPL1P38991 367 aa4.44□□□□□ -1.7
LCB4YOR171C YJR115WP47152 169 aa4.44□□□□□ -1.7
LCB4YOR171C FOX2Q02207 900 aaKnown RBP4.44□□□□□ -1.7
LCB4YOR171C LSO1Q3E827 93 aa4.44□□□□□ -1.7
LCB4YOR171C ISC10P32645 267 aa4.43□□□□□ -1.7
LCB4YOR171C GLO3P38682 493 aaKnown RBP4.43□□□□□ -1.7
LCB4YOR171C TOP1P04786 769 aa4.43□□□□□ -1.7
LCB4YOR171C STM1P39015 273 aaKnown RBP4.43□□□□□ -1.7
LCB4YOR171C SSN3P39073 555 aa4.43□□□□□ -1.7
LCB4YOR171C QDR1P40475 563 aa4.43□□□□□ -1.7
LCB4YOR171C RRN6P32786 894 aa4.42□□□□□ -1.7
LCB4YOR171C DLD1P32891 587 aa4.42□□□□□ -1.7
LCB4YOR171C SNU71P53207 620 aaKnown RBP4.42□□□□□ -1.7
LCB4YOR171C YNL165WP53891 406 aa4.42□□□□□ -1.7
LCB4YOR171C YDL176WQ12027 708 aa4.42□□□□□ -1.7
LCB4YOR171C YHL050CP38721 697 aa4.41□□□□□ -1.7
LCB4YOR171C YHR219WP38900 624 aa4.41□□□□□ -1.7
LCB4YOR171C APC11Q12157 165 aa4.41□□□□□ -1.7
LCB4YOR171C FRT1Q99332 602 aa4.41□□□□□ -1.7
LCB4YOR171C RPB10P22139 70 aa4.41□□□□□ -1.7
LCB4YOR171C KTR2P33550 425 aa4.41□□□□□ -1.7
LCB4YOR171C SCD5P34758 872 aa4.41□□□□□ -1.7
LCB4YOR171C SHM1P37292 490 aaPredicted RBP4.41□□□□□ -1.7
LCB4YOR171C MSN5P52918 1224 aa4.41□□□□□ -1.7
LCB4YOR171C MSC6Q08818 692 aaKnown RBP4.41□□□□□ -1.7
LCB4YOR171C TY1A-DR3Q12441 440 aa4.41□□□□□ -1.7
LCB4YOR171C SRF1Q12516 437 aa4.41□□□□□ -1.7
LCB4YOR171C MRPL33P20084 86 aa4.4□□□□□ -1.71
LCB4YOR171C ALA1P40825 983 aaKnown RBP4.4□□□□□ -1.71
LCB4YOR171C JJJ2P46997 583 aa4.4□□□□□ -1.71
LCB4YOR171C ACF4P47129 309 aa4.4□□□□□ -1.71
LCB4YOR171C RPS31P05759 152 aaKnown RBP4.39□□□□□ -1.71
LCB4YOR171C MLF3P32047 452 aa4.39□□□□□ -1.71
LCB4YOR171C SLA1P32790 1244 aa4.39□□□□□ -1.71
LCB4YOR171C NUP85P46673 744 aa4.39□□□□□ -1.71
LCB4YOR171C YJR098CP47139 656 aa4.39□□□□□ -1.71
LCB4YOR171C NUT2Q06213 157 aa4.39□□□□□ -1.71
LCB4YOR171C WHI5Q12416 295 aa4.39□□□□□ -1.71
LCB4YOR171C SEC20P28791 383 aa4.39□□□□□ -1.71
LCB4YOR171C UTP4Q06679 776 aaKnown RBP4.39□□□□□ -1.71
LCB4YOR171C Q0182Q9ZZW1 134 aa4.39□□□□□ -1.71
LCB4YOR171C DAL1P32375 460 aa4.38□□□□□ -1.71
LCB4YOR171C PPX1P38698 397 aa4.38□□□□□ -1.71
LCB4YOR171C VTC4P47075 721 aa4.38□□□□□ -1.71
LCB4YOR171C HEM3P28789 327 aa4.37□□□□□ -1.71
LCB4YOR171C SPR3P41901 512 aa4.37□□□□□ -1.71
LCB4YOR171C LSC2P53312 427 aa4.37□□□□□ -1.71
LCB4YOR171C VMA3P25515 160 aa4.37□□□□□ -1.71
LCB4YOR171C IRE1P32361 1115 aa4.37□□□□□ -1.71
LCB4YOR171C AHP1P38013 176 aaKnown RBP4.37□□□□□ -1.71
LCB4YOR171C GPI13Q07830 1017 aa4.37□□□□□ -1.71
LCB4YOR171C SUT1P53032 299 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms