RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeastyeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSP3YOR003W SWI1P09547 1314 aa13.34□□□□□ -0.27
YSP3YOR003W DNM1P54861 757 aa13.33□□□□□ -0.28
YSP3YOR003W MRP7P12687 371 aa13.32□□□□□ -0.28
YSP3YOR003W FCP1Q03254 732 aa13.32□□□□□ -0.28
YSP3YOR003W YDR306CQ06640 478 aa13.32□□□□□ -0.28
YSP3YOR003W IRC3Q06683 689 aa13.32□□□□□ -0.28
YSP3YOR003W MRPL32P25348 183 aa13.31□□□□□ -0.28
YSP3YOR003W NSR1P27476 414 aaKnown RBP RIP-Chip data13.31□□□□□ -0.28not detected
YSP3YOR003W NUP133P36161 1157 aa13.31□□□□□ -0.28
YSP3YOR003W CST6P40535 587 aa13.3□□□□□ -0.28
YSP3YOR003W YLR271WQ06152 274 aa13.3□□□□□ -0.28
YSP3YOR003W HAT1Q12341 374 aa13.3□□□□□ -0.28
YSP3YOR003W DIB1Q06819 143 aaPredicted RBP13.29□□□□□ -0.28
YSP3YOR003W PRS1P32895 427 aaKnown RBP13.28□□□□□ -0.28
YSP3YOR003W SWC3P31376 625 aa13.27□□□□□ -0.29
YSP3YOR003W RAD24P32641 659 aa13.27□□□□□ -0.29
YSP3YOR003W ERO1Q03103 563 aa13.27□□□□□ -0.29
YSP3YOR003W SQS1P53866 767 aaKnown RBP13.26□□□□□ -0.29
YSP3YOR003W FRD1P32614 470 aaKnown RBP13.25□□□□□ -0.29
YSP3YOR003W NOP8Q08287 484 aaPredicted RBP13.25□□□□□ -0.29
YSP3YOR003W SSK22P25390 1331 aaPredicted RBP13.25□□□□□ -0.29
YSP3YOR003W TOP1P04786 769 aa13.24□□□□□ -0.29
YSP3YOR003W DAL5P15365 543 aa13.24□□□□□ -0.29
YSP3YOR003W ICL1P28240 557 aaPredicted RBP13.24□□□□□ -0.29
YSP3YOR003W RPN1P38764 993 aaKnown RBP13.24□□□□□ -0.29
YSP3YOR003W FUN12P39730 1002 aaKnown RBP13.24□□□□□ -0.29
YSP3YOR003W YJR008WP47085 338 aa13.24□□□□□ -0.29
YSP3YOR003W UBP16Q02863 499 aa13.24□□□□□ -0.29
YSP3YOR003W MAK21Q12176 1025 aaKnown RBP13.24□□□□□ -0.29
YSP3YOR003W SIT4P20604 311 aa13.23□□□□□ -0.29
YSP3YOR003W YPP1P46951 817 aa13.23□□□□□ -0.29
YSP3YOR003W CSI1Q04368 295 aa13.23□□□□□ -0.29
YSP3YOR003W SYF1Q04048 859 aaPredicted RBP13.22□□□□□ -0.29
YSP3YOR003W ITC1P53125 1264 aa13.22□□□□□ -0.29
YSP3YOR003W SAS4Q04003 481 aa13.22□□□□□ -0.29
YSP3YOR003W NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.21□□□□□ -0.3not detected
YSP3YOR003W PSH1Q12161 406 aa13.21□□□□□ -0.3
YSP3YOR003W YIL092WP40497 633 aa13.2□□□□□ -0.3
YSP3YOR003W SET1P38827 1080 aaKnown RBP13.19□□□□□ -0.3
YSP3YOR003W HXT10P43581 546 aa13.18□□□□□ -0.3
YSP3YOR003W YKU70P32807 602 aa13.17□□□□□ -0.3
YSP3YOR003W UBP12P39538 1254 aa13.16□□□□□ -0.3
YSP3YOR003W YRB30P53107 440 aaPredicted RBP13.16□□□□□ -0.3
YSP3YOR003W BOI2P39969 1040 aa13.15□□□□□ -0.3
YSP3YOR003W GRX6Q12438 231 aa13.15□□□□□ -0.3
YSP3YOR003W TRP5P00931 707 aaKnown RBP13.14□□□□□ -0.31
YSP3YOR003W RET1P22276 1149 aaKnown RBP13.13□□□□□ -0.31
YSP3YOR003W RAD2P07276 1031 aa13.13□□□□□ -0.31
YSP3YOR003W DPH6Q12429 685 aa13.13□□□□□ -0.31
YSP3YOR003W RPS19AP07280 144 aaKnown RBP13.12□□□□□ -0.31
YSP3YOR003W RPS19BP07281 144 aaPredicted RBP13.12□□□□□ -0.31
YSP3YOR003W NGR1P32831 672 aaKnown RBP13.12□□□□□ -0.31
YSP3YOR003W SLI15P38283 698 aa13.12□□□□□ -0.31
YSP3YOR003W FAS2P19097 1887 aaKnown RBP13.11□□□□□ -0.31
YSP3YOR003W SHC1P39000 512 aa13.11□□□□□ -0.31
YSP3YOR003W ICP55P40051 511 aa13.11□□□□□ -0.31
YSP3YOR003W ATG20Q07528 640 aa13.11□□□□□ -0.31
YSP3YOR003W SET4P42948 560 aa13.1□□□□□ -0.31
YSP3YOR003W THI3Q07471 609 aa13.1□□□□□ -0.31
YSP3YOR003W HKR1P41809 1802 aa13.1□□□□□ -0.31
YSP3YOR003W SAC3P46674 1301 aa13.1□□□□□ -0.31
YSP3YOR003W MGM1P32266 881 aa13.09□□□□□ -0.31
YSP3YOR003W RPT4P53549 437 aaKnown RBP13.09□□□□□ -0.31
YSP3YOR003W FPK1P53739 893 aa13.09□□□□□ -0.31
YSP3YOR003W MTC5Q03897 1148 aa13.09□□□□□ -0.31
YSP3YOR003W KRE2P27809 442 aa13.08□□□□□ -0.32
YSP3YOR003W YKR023WP36119 530 aaKnown RBP13.08□□□□□ -0.32
YSP3YOR003W YNG2P38806 282 aaKnown RBP13.08□□□□□ -0.32
YSP3YOR003W SNU66Q12420 587 aaPredicted RBP13.08□□□□□ -0.32
YSP3YOR003W SLA1P32790 1244 aa13.07□□□□□ -0.32
YSP3YOR003W SPL2P38839 148 aa13.07□□□□□ -0.32
YSP3YOR003W DPL1Q05567 589 aa13.07□□□□□ -0.32
YSP3YOR003W SUP35P05453 685 aaKnown RBP13.06□□□□□ -0.32
YSP3YOR003W ILV3P39522 585 aaKnown RBP13.06□□□□□ -0.32
YSP3YOR003W SPO1P53541 631 aa13.06□□□□□ -0.32
YSP3YOR003W GAS5Q08193 484 aa13.05□□□□□ -0.32
YSP3YOR003W THS1P04801 734 aaKnown RBP13.04□□□□□ -0.32
YSP3YOR003W GAP1P19145 602 aaPredicted RBP13.04□□□□□ -0.32
YSP3YOR003W GSM1P42950 618 aa13.04□□□□□ -0.32
YSP3YOR003W SRC1Q03707 834 aa13.04□□□□□ -0.32
YSP3YOR003W PUF6Q04373 656 aaKnown RBP13.04□□□□□ -0.32
YSP3YOR003W HAA1Q12753 694 aaKnown RBP13.04□□□□□ -0.32
YSP3YOR003W POL32P47110 350 aa13.02□□□□□ -0.33
YSP3YOR003W PUS5Q06244 254 aa13.02□□□□□ -0.33
YSP3YOR003W RPS9BP05755 195 aaKnown RBP13.01□□□□□ -0.33
YSP3YOR003W TIF4632P39936 914 aaKnown RBP13.01□□□□□ -0.33
YSP3YOR003W DUR1,2P32528 1835 aaKnown RBP13□□□□□ -0.33
YSP3YOR003W MSM1P22438 575 aa13□□□□□ -0.33
YSP3YOR003W IRC4Q03036 179 aa13□□□□□ -0.33
YSP3YOR003W OXP1P28273 1286 aa12.99□□□□□ -0.33
YSP3YOR003W TOS4Q06266 489 aa12.99□□□□□ -0.33
YSP3YOR003W ADR1P07248 1323 aa12.98□□□□□ -0.33
YSP3YOR003W SSA4P22202 642 aaKnown RBP12.98□□□□□ -0.33
YSP3YOR003W LCB1P25045 558 aaKnown RBP12.98□□□□□ -0.33
YSP3YOR003W GCD7P32502 381 aaPredicted RBP12.98□□□□□ -0.33
YSP3YOR003W AFG2P32794 780 aa12.98□□□□□ -0.33
YSP3YOR003W TRM44Q02648 567 aaKnown RBP12.98□□□□□ -0.33
YSP3YOR003W UBX2Q04228 584 aa12.98□□□□□ -0.33
YSP3YOR003W RRG1Q12167 365 aaPredicted RBP12.98□□□□□ -0.33
YSP3YOR003W SEC18P18759 758 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms