RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT8	YOL048C	RPS19A	P07280	144 aa	Known RBP	10.71	□□□□□ -0.69
RRT8	YOL048C	RPS19B	P07281	144 aa	Predicted RBP	10.71	□□□□□ -0.69
RRT8	YOL048C	SWI1	P09547	1314 aa		10.71	□□□□□ -0.69
RRT8	YOL048C	UBP10	P53874	792 aa	Predicted RBP	10.71	□□□□□ -0.69
RRT8	YOL048C	OXP1	P28273	1286 aa		10.69	□□□□□ -0.7
RRT8	YOL048C	BOI2	P39969	1040 aa		10.69	□□□□□ -0.7
RRT8	YOL048C	YPR204W	Q08995	1032 aa		10.69	□□□□□ -0.7
RRT8	YOL048C	NYV1	Q12255	253 aa		10.69	□□□□□ -0.7
RRT8	YOL048C	ARG8	P18544	423 aa		10.68	□□□□□ -0.7
RRT8	YOL048C	ILV3	P39522	585 aa	Known RBP	10.68	□□□□□ -0.7
RRT8	YOL048C	ALD2	P47771	506 aa		10.68	□□□□□ -0.7
RRT8	YOL048C	LPD1	P09624	499 aa	Known RBP	10.67	□□□□□ -0.7
RRT8	YOL048C	NMD2	P38798	1089 aa	Known RBP	10.67	□□□□□ -0.7
RRT8	YOL048C	CTI6	Q08923	506 aa		10.67	□□□□□ -0.7
RRT8	YOL048C	BDF1	P35817	686 aa		10.66	□□□□□ -0.7
RRT8	YOL048C	YBL086C	P38177	466 aa		10.66	□□□□□ -0.7
RRT8	YOL048C	YLR271W	Q06152	274 aa		10.66	□□□□□ -0.7
RRT8	YOL048C	RPC31	P17890	251 aa		10.65	□□□□□ -0.7
RRT8	YOL048C	UBP12	P39538	1254 aa		10.65	□□□□□ -0.7
RRT8	YOL048C	ALD3	P54114	506 aa		10.65	□□□□□ -0.7
RRT8	YOL048C	HPC2	Q01448	625 aa		10.65	□□□□□ -0.7
RRT8	YOL048C	FCP1	Q03254	732 aa		10.65	□□□□□ -0.7
RRT8	YOL048C	YJR008W	P47085	338 aa		10.64	□□□□□ -0.71
RRT8	YOL048C	PSH1	Q12161	406 aa		10.64	□□□□□ -0.71
RRT8	YOL048C	SSA2	P10592	639 aa	Known RBP	10.63	□□□□□ -0.71
RRT8	YOL048C	UGA2	P38067	497 aa		10.63	□□□□□ -0.71
RRT8	YOL048C	BDP1	P46678	594 aa		10.63	□□□□□ -0.71
RRT8	YOL048C	CTH1	P47976	325 aa		10.63	□□□□□ -0.71
RRT8	YOL048C	ITC1	P53125	1264 aa		10.63	□□□□□ -0.71
RRT8	YOL048C	MAP2	P38174	421 aa	Known RBP	10.62	□□□□□ -0.71
RRT8	YOL048C	UTP22	P53254	1237 aa	Predicted RBP	10.62	□□□□□ -0.71
RRT8	YOL048C	RIM15	P43565	1770 aa		10.62	□□□□□ -0.71
RRT8	YOL048C	SUP35	P05453	685 aa	Known RBP	10.61	□□□□□ -0.71
RRT8	YOL048C	RFC1	P38630	861 aa	Known RBP	10.61	□□□□□ -0.71
RRT8	YOL048C	GCD7	P32502	381 aa	Predicted RBP	10.6	□□□□□ -0.71
RRT8	YOL048C	SET1	P38827	1080 aa	Known RBP	10.6	□□□□□ -0.71
RRT8	YOL048C	HGH1	P48362	394 aa	Known RBP	10.6	□□□□□ -0.71
RRT8	YOL048C	GTT3	P39996	337 aa		10.59	□□□□□ -0.71
RRT8	YOL048C	RAT1	Q02792	1006 aa	Known RBP	10.59	□□□□□ -0.71
RRT8	YOL048C	ECM16	Q04217	1267 aa	Known RBP	10.59	□□□□□ -0.71
RRT8	YOL048C	RIX7	Q07844	837 aa	Known RBP	10.59	□□□□□ -0.71
RRT8	YOL048C	NCB2	Q92317	146 aa		10.59	□□□□□ -0.71
RRT8	YOL048C	HXT10	P43581	546 aa		10.58	□□□□□ -0.72
RRT8	YOL048C	NKP2	Q06162	153 aa		10.58	□□□□□ -0.72
RRT8	YOL048C	HAT1	Q12341	374 aa		10.58	□□□□□ -0.72
RRT8	YOL048C	SNU66	Q12420	587 aa	Predicted RBP	10.58	□□□□□ -0.72
RRT8	YOL048C	SLA1	P32790	1244 aa		10.56	□□□□□ -0.72
RRT8	YOL048C	SSF1	P38789	453 aa	Predicted RBP	10.56	□□□□□ -0.72
RRT8	YOL048C	BCH2	P36122	765 aa		10.55	□□□□□ -0.72
RRT8	YOL048C	TOS1	P38288	455 aa		10.54	□□□□□ -0.72
RRT8	YOL048C	MTC5	Q03897	1148 aa		10.54	□□□□□ -0.72
RRT8	YOL048C	BDF2	Q07442	638 aa		10.54	□□□□□ -0.72
RRT8	YOL048C	RMD1	Q03441	430 aa		10.53	□□□□□ -0.72
RRT8	YOL048C	IRC3	Q06683	689 aa		10.53	□□□□□ -0.72
RRT8	YOL048C	DIB1	Q06819	143 aa	Predicted RBP	10.53	□□□□□ -0.72
RRT8	YOL048C	RAD50	P12753	1312 aa		10.52	□□□□□ -0.73
RRT8	YOL048C	SSK22	P25390	1331 aa	Predicted RBP	10.52	□□□□□ -0.73
RRT8	YOL048C	PDR18	P53756	1333 aa		10.52	□□□□□ -0.73
RRT8	YOL048C	CAF20	P12962	161 aa	Known RBP	10.5	□□□□□ -0.73
RRT8	YOL048C	NGR1	P32831	672 aa	Known RBP	10.49	□□□□□ -0.73
RRT8	YOL048C	RPN1	P38764	993 aa	Known RBP	10.49	□□□□□ -0.73
RRT8	YOL048C	GYP5	Q12344	894 aa		10.49	□□□□□ -0.73
RRT8	YOL048C	NOT3	P06102	836 aa	Known RBP	10.48	□□□□□ -0.73
RRT8	YOL048C	ECM21	P38167	1117 aa	Known RBP	10.48	□□□□□ -0.73
RRT8	YOL048C	MSN5	P52918	1224 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	SCY1	P53009	804 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	YGL242C	P53066	181 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	MLC1	P53141	149 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	UBP16	Q02863	499 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	SAS4	Q04003	481 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	SYF1	Q04048	859 aa	Predicted RBP	10.48	□□□□□ -0.73
RRT8	YOL048C	RRI2	Q12348	645 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	SAC3	P46674	1301 aa		10.48	□□□□□ -0.73
RRT8	YOL048C	VAS1	P07806	1104 aa	Known RBP	10.47	□□□□□ -0.73
RRT8	YOL048C	CDC16	P09798	840 aa		10.47	□□□□□ -0.73
RRT8	YOL048C	SEC18	P18759	758 aa	Known RBP	10.47	□□□□□ -0.73
RRT8	YOL048C	FRD1	P32614	470 aa	Known RBP	10.47	□□□□□ -0.73
RRT8	YOL048C	SRC1	Q03707	834 aa		10.46	□□□□□ -0.73
RRT8	YOL048C	THI3	Q07471	609 aa		10.46	□□□□□ -0.73
RRT8	YOL048C	DPH6	Q12429	685 aa		10.46	□□□□□ -0.73
RRT8	YOL048C	AI2	P03876	854 aa		10.45	□□□□□ -0.74
RRT8	YOL048C	YNL193W	P53870	558 aa		10.45	□□□□□ -0.74
RRT8	YOL048C	ALO1	P54783	526 aa	Known RBP	10.45	□□□□□ -0.74
RRT8	YOL048C	BRE1	Q07457	700 aa	Known RBP	10.45	□□□□□ -0.74
RRT8	YOL048C	MGM1	P32266	881 aa		10.44	□□□□□ -0.74
RRT8	YOL048C	KTR3	P38130	404 aa	Predicted RBP	10.44	□□□□□ -0.74
RRT8	YOL048C	PFF1	P38244	976 aa		10.44	□□□□□ -0.74
RRT8	YOL048C	CWH41	P53008	833 aa		10.44	□□□□□ -0.74
RRT8	YOL048C	SMY1	P32364	656 aa	Known RBP	10.43	□□□□□ -0.74
RRT8	YOL048C	BRN1	P38170	754 aa		10.43	□□□□□ -0.74
RRT8	YOL048C	EAF6	P47128	113 aa		10.43	□□□□□ -0.74
RRT8	YOL048C	RPN7	Q06103	429 aa	Known RBP	10.43	□□□□□ -0.74
RRT8	YOL048C	FPR4	Q06205	392 aa	Predicted RBP	10.43	□□□□□ -0.74
RRT8	YOL048C	UTP10	P42945	1769 aa	Known RBP	10.42	□□□□□ -0.74
RRT8	YOL048C	DLD1	P32891	587 aa		10.42	□□□□□ -0.74
RRT8	YOL048C	PBY1	P38254	753 aa		10.42	□□□□□ -0.74
RRT8	YOL048C	ICP55	P40051	511 aa		10.42	□□□□□ -0.74
RRT8	YOL048C	GCR2	Q01722	534 aa		10.42	□□□□□ -0.74
RRT8	YOL048C	SIT4	P20604	311 aa		10.41	□□□□□ -0.74
RRT8	YOL048C	YKL222C	P35995	705 aa		10.41	□□□□□ -0.74

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms